RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 DCAF8L2P0C7V8 631 aa11.48□□□□□ -0.57
DMD-228ENST00000541735 EHMT2Q96KQ7 1210 aa10.72□□□□□ -0.69
DMD-228ENST00000541735 SUPT5HO00267 1087 aaKnown RBP10.34□□□□□ -0.75
DMD-228ENST00000541735 TTBK1Q5TCY1 1321 aaPredicted RBP10.25□□□□□ -0.77
DMD-228ENST00000541735 RANGAP1P46060 587 aaPredicted RBP10.21□□□□□ -0.78
DMD-228ENST00000541735 SHROOM4Q9ULL8 1493 aa10.13□□□□□ -0.79
DMD-228ENST00000541735 ATP1B4Q9UN42 357 aaPredicted RBP10.12□□□□□ -0.79
DMD-228ENST00000541735 FAM9AQ8IZU1 332 aaPredicted RBP10.09□□□□□ -0.79
DMD-228ENST00000541735 APLP2Q06481 763 aa10.05□□□□□ -0.8
DMD-228ENST00000541735 CHIC1Q5VXU3 224 aa10.03□□□□□ -0.8
DMD-228ENST00000541735 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
DMD-228ENST00000541735 PELP1Q8IZL8 1130 aaKnown RBP9.87□□□□□ -0.83
DMD-228ENST00000541735 ERICH6Q7L0X2 663 aa9.78□□□□□ -0.84
DMD-228ENST00000541735 CNGB1Q14028 1251 aaPredicted RBP9.75□□□□□ -0.85
DMD-228ENST00000541735 POLR3GLQ9BT43 218 aa9.72□□□□□ -0.85
DMD-228ENST00000541735 SLC4A1APQ9BWU0 796 aaKnown RBP9.71□□□□□ -0.86
DMD-228ENST00000541735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.7□□□□□ -0.86
DMD-228ENST00000541735 HNRNPUL2Q1KMD3 747 aaKnown RBP9.7□□□□□ -0.86
DMD-228ENST00000541735 PCGF6Q9BYE7 350 aa9.7□□□□□ -0.86
DMD-228ENST00000541735 MYT1Q01538 1121 aa9.63□□□□□ -0.87
DMD-228ENST00000541735 PLPPR3Q6T4P5 718 aa9.55□□□□□ -0.88
DMD-228ENST00000541735 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
DMD-228ENST00000541735 YTHDC1Q96MU7 727 aaKnown RBP9.54□□□□□ -0.88
DMD-228ENST00000541735 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
DMD-228ENST00000541735 ITGAEP38570 1179 aa9.52□□□□□ -0.89
DMD-228ENST00000541735 SLC24A1O60721 1099 aa9.52□□□□□ -0.89
DMD-228ENST00000541735 BCL11AQ9H165 835 aa9.5□□□□□ -0.89
DMD-228ENST00000541735 CCER1Q8TC90 406 aaPredicted RBP9.49□□□□□ -0.89
DMD-228ENST00000541735 BCANQ96GW7 911 aa9.42□□□□□ -0.9
DMD-228ENST00000541735 NEFLP07196 543 aa9.39□□□□□ -0.91
DMD-228ENST00000541735 DAXXQ9UER7 740 aaPredicted RBP9.38□□□□□ -0.91
DMD-228ENST00000541735 TRIM41Q8WV44 630 aa9.37□□□□□ -0.91
DMD-228ENST00000541735 FBLN2P98095 1184 aa9.29□□□□□ -0.92
DMD-228ENST00000541735 CLSPNQ9HAW4 1339 aa9.27□□□□□ -0.92
DMD-228ENST00000541735 A0A0G2JS52 829 aa9.27□□□□□ -0.93
DMD-228ENST00000541735 CENPBP07199 599 aaPredicted RBP9.25□□□□□ -0.93
DMD-228ENST00000541735 PLEKHG5O94827 1062 aa9.24□□□□□ -0.93
DMD-228ENST00000541735 SCAF1Q9H7N4 1312 aaKnown RBP9.2□□□□□ -0.94
DMD-228ENST00000541735 NISCHQ9Y2I1 1504 aa9.18□□□□□ -0.94
DMD-228ENST00000541735 ZNF326Q5BKZ1 582 aaKnown RBP9.17□□□□□ -0.94
DMD-228ENST00000541735 ARID3CA6NKF2 412 aa9.17□□□□□ -0.94
DMD-228ENST00000541735 SENP3Q9H4L4 574 aaPredicted RBP9.15□□□□□ -0.94
DMD-228ENST00000541735 ZNF316A6NFI3 1004 aaPredicted RBP9.13□□□□□ -0.95
DMD-228ENST00000541735 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
DMD-228ENST00000541735 ZBTB47Q9UFB7 747 aaPredicted RBP9.1□□□□□ -0.95
DMD-228ENST00000541735 ESF1Q9H501 851 aaKnown RBP9.09□□□□□ -0.95
DMD-228ENST00000541735 FAM50AQ14320 339 aaKnown RBP9.08□□□□□ -0.96
DMD-228ENST00000541735 ZBTB7CA1YPR0 619 aa9.04□□□□□ -0.96
DMD-228ENST00000541735 STAG3Q9UJ98 1225 aa9.03□□□□□ -0.96
DMD-228ENST00000541735 PABPN1Q86U42 306 aaKnown RBP eCLIP9.02□□□□□ -0.96
DMD-228ENST00000541735 NEUROD1Q13562 356 aa9.02□□□□□ -0.97
DMD-228ENST00000541735 CHGAP10645 457 aaKnown RBP9.02□□□□□ -0.97
DMD-228ENST00000541735 TULP1O00294 542 aaPredicted RBP9.01□□□□□ -0.97
DMD-228ENST00000541735 CANXP27824 592 aaKnown RBP8.99□□□□□ -0.97
DMD-228ENST00000541735 NCBP3Q53F19 620 aaKnown RBP8.96□□□□□ -0.97
DMD-228ENST00000541735 ZNF777Q9ULD5 760 aaPredicted RBP8.95□□□□□ -0.98
DMD-228ENST00000541735 NEFMP07197 916 aa8.95□□□□□ -0.98
DMD-228ENST00000541735 ZEB1P37275 1124 aaPredicted RBP8.93□□□□□ -0.98
DMD-228ENST00000541735 C14orf37Q86TY3 774 aa8.92□□□□□ -0.98
DMD-228ENST00000541735 P3H3Q8IVL6 736 aa8.91□□□□□ -0.98
DMD-228ENST00000541735 ARXQ96QS3 562 aa8.91□□□□□ -0.98
DMD-228ENST00000541735 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
DMD-228ENST00000541735 HAP1P54257 671 aaPredicted RBP8.88□□□□□ -0.99
DMD-228ENST00000541735 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
DMD-228ENST00000541735 NPM1P06748 294 aaKnown RBP eCLIP8.83□□□□□ -1
DMD-228ENST00000541735 NPM2Q86SE8 214 aaKnown RBP8.82□□□□□ -1
DMD-228ENST00000541735 TAOK2Q9UL54 1235 aa8.8□□□□□ -1
DMD-228ENST00000541735 NPHP1O15259 732 aa8.79□□□□□ -1
DMD-228ENST00000541735 ARID4BQ4LE39 1312 aaPredicted RBP8.79□□□□□ -1
DMD-228ENST00000541735 TRHP20396 242 aaPredicted RBP8.79□□□□□ -1
DMD-228ENST00000541735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.79□□□□□ -1
DMD-228ENST00000541735 SALL2Q9Y467 1007 aaPredicted RBP8.79□□□□□ -1
DMD-228ENST00000541735 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
DMD-228ENST00000541735 CDK11BP21127 795 aaKnown RBP8.75□□□□□ -1.01
DMD-228ENST00000541735 CDK11AQ9UQ88 783 aaPredicted RBP8.75□□□□□ -1.01
DMD-228ENST00000541735 HSP90AA1P07900 732 aaKnown RBP8.73□□□□□ -1.01
DMD-228ENST00000541735 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
DMD-228ENST00000541735 ABCC9O60706 1549 aa8.71□□□□□ -1.01
DMD-228ENST00000541735 TPRNQ4KMQ1 711 aa8.71□□□□□ -1.02
DMD-228ENST00000541735 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
DMD-228ENST00000541735 PPP1R15AO75807 674 aaPredicted RBP8.67□□□□□ -1.02
DMD-228ENST00000541735 AMER1Q5JTC6 1135 aaPredicted RBP8.67□□□□□ -1.02
DMD-228ENST00000541735 ANP32CO43423 234 aa8.66□□□□□ -1.02
DMD-228ENST00000541735 CLSTN1O94985 981 aa8.65□□□□□ -1.03
DMD-228ENST00000541735 HRCP23327 699 aa8.64□□□□□ -1.03
DMD-228ENST00000541735 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
DMD-228ENST00000541735 KDM2AQ9Y2K7 1162 aa8.62□□□□□ -1.03
DMD-228ENST00000541735 PPM1GO15355 546 aaPredicted RBP8.61□□□□□ -1.03
DMD-228ENST00000541735 ISY1Q9ULR0 285 aaKnown RBP8.6□□□□□ -1.03
DMD-228ENST00000541735 SENP3-EIF4A1A0A087X0R7 540 aa8.6□□□□□ -1.03
DMD-228ENST00000541735 DIEXFQ68CQ4 756 aaKnown RBP8.59□□□□□ -1.03
DMD-228ENST00000541735 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.04
DMD-228ENST00000541735 AEBP2Q6ZN18 517 aaPredicted RBP8.58□□□□□ -1.04
DMD-228ENST00000541735 MLECQ14165 292 aa8.57□□□□□ -1.04
DMD-228ENST00000541735 SOX12O15370 315 aa8.56□□□□□ -1.04
DMD-228ENST00000541735 PRM3Q9NNZ6 103 aa8.55□□□□□ -1.04
DMD-228ENST00000541735 ANP32BQ92688 251 aaKnown RBP8.55□□□□□ -1.04
DMD-228ENST00000541735 CCDC9Q9Y3X0 531 aaKnown RBP8.55□□□□□ -1.04
DMD-228ENST00000541735 TMC1Q8TDI8 760 aa8.55□□□□□ -1.04
DMD-228ENST00000541735 EIF5BO60841 1220 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms