RNA–Protein interactions for RNA: ENST00000539988.1

AC008115.2-201, humanhuman

TSL 3 BASIC

Gene AC008115.2, Length 241 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008115.2-201ENST00000539988 CHIC1Q5VXU3 224 aa6.95□□□□□ -1.3
AC008115.2-201ENST00000539988 AEBP2Q6ZN18 517 aaPredicted RBP6.61□□□□□ -1.35
AC008115.2-201ENST00000539988 SLC24A1O60721 1099 aa6.26□□□□□ -1.41
AC008115.2-201ENST00000539988 PHF23Q9BUL5 403 aaPredicted RBP6.26□□□□□ -1.41
AC008115.2-201ENST00000539988 EHMT2Q96KQ7 1210 aa6.14□□□□□ -1.43
AC008115.2-201ENST00000539988 PLPPR3Q6T4P5 718 aa5.93□□□□□ -1.46
AC008115.2-201ENST00000539988 CSRNP3Q8WYN3 585 aa5.87□□□□□ -1.47
AC008115.2-201ENST00000539988 KCNA4P22459 653 aa5.85□□□□□ -1.47
AC008115.2-201ENST00000539988 RTN4Q9NQC3 1192 aaKnown RBP5.83□□□□□ -1.48
AC008115.2-201ENST00000539988 AMER1Q5JTC6 1135 aaPredicted RBP5.72□□□□□ -1.49
AC008115.2-201ENST00000539988 NCBP3Q53F19 620 aaKnown RBP5.65□□□□□ -1.5
AC008115.2-201ENST00000539988 SLC4A1APQ9BWU0 796 aaKnown RBP5.61□□□□□ -1.51
AC008115.2-201ENST00000539988 ADRA2BP18089 450 aa5.57□□□□□ -1.52
AC008115.2-201ENST00000539988 PRKCSHP14314 528 aaPredicted RBP5.49□□□□□ -1.53
AC008115.2-201ENST00000539988 DAXXQ9UER7 740 aaPredicted RBP5.49□□□□□ -1.53
AC008115.2-201ENST00000539988 ZBTB22O15209 634 aa5.45□□□□□ -1.54
AC008115.2-201ENST00000539988 SENP3Q9H4L4 574 aaPredicted RBP5.36□□□□□ -1.55
AC008115.2-201ENST00000539988 TAOK2Q9UL54 1235 aa5.34□□□□□ -1.55
AC008115.2-201ENST00000539988 PPP6R1Q9UPN7 881 aa5.34□□□□□ -1.55
AC008115.2-201ENST00000539988 ARXQ96QS3 562 aa5.29□□□□□ -1.56
AC008115.2-201ENST00000539988 TIMELESSQ9UNS1 1208 aa5.29□□□□□ -1.56
AC008115.2-201ENST00000539988 PLCB2Q00722 1185 aa5.28□□□□□ -1.56
AC008115.2-201ENST00000539988 BCANQ96GW7 911 aa5.28□□□□□ -1.56
AC008115.2-201ENST00000539988 NPM3O75607 178 aaKnown RBP5.27□□□□□ -1.57
AC008115.2-201ENST00000539988 PPP4R3CPQ6ZMV5 832 aa5.27□□□□□ -1.57
AC008115.2-201ENST00000539988 TPRNQ4KMQ1 711 aa5.23□□□□□ -1.57
AC008115.2-201ENST00000539988 TULP1O00294 542 aaPredicted RBP5.21□□□□□ -1.58
AC008115.2-201ENST00000539988 FKBP8Q14318 412 aa5.2□□□□□ -1.58
AC008115.2-201ENST00000539988 HAP1P54257 671 aaPredicted RBP5.18□□□□□ -1.58
AC008115.2-201ENST00000539988 FOXD4L1Q9NU39 408 aa5.15□□□□□ -1.59
AC008115.2-201ENST00000539988 VSIG10Q8N0Z9 540 aa5.14□□□□□ -1.59
AC008115.2-201ENST00000539988 HOMEZQ8IX15 550 aa5.12□□□□□ -1.59
AC008115.2-201ENST00000539988 GTF3C3Q9Y5Q9 886 aa5.12□□□□□ -1.59
AC008115.2-201ENST00000539988 KDM2AQ9Y2K7 1162 aa5.09□□□□□ -1.59
AC008115.2-201ENST00000539988 FBLN2P98095 1184 aa5.03□□□□□ -1.6
AC008115.2-201ENST00000539988 FOXD1Q16676 465 aa5.01□□□□□ -1.61
AC008115.2-201ENST00000539988 TMEM132AQ24JP5 1023 aa5.01□□□□□ -1.61
AC008115.2-201ENST00000539988 ERICH6Q7L0X2 663 aa5.01□□□□□ -1.61
AC008115.2-201ENST00000539988 DNAJC5BQ9UF47 199 aa4.99□□□□□ -1.61
AC008115.2-201ENST00000539988 PODXL2Q9NZ53 605 aa4.96□□□□□ -1.62
AC008115.2-201ENST00000539988 RANGAP1P46060 587 aaPredicted RBP4.95□□□□□ -1.62
AC008115.2-201ENST00000539988 APLP2Q06481 763 aa4.95□□□□□ -1.62
AC008115.2-201ENST00000539988 KLHL34Q8N239 644 aa4.95□□□□□ -1.62
AC008115.2-201ENST00000539988 CNKSR2Q8WXI2 1034 aa4.95□□□□□ -1.62
AC008115.2-201ENST00000539988 C14orf37Q86TY3 774 aa4.92□□□□□ -1.62
AC008115.2-201ENST00000539988 DCAF8L2P0C7V8 631 aa4.9□□□□□ -1.63
AC008115.2-201ENST00000539988 ATXN8OSP0DMR3 200 aa4.9□□□□□ -1.63
AC008115.2-201ENST00000539988 PKD2Q13563 968 aa4.88□□□□□ -1.63
AC008115.2-201ENST00000539988 NPM1P06748 294 aaKnown RBP eCLIP4.87□□□□□ -1.63
AC008115.2-201ENST00000539988 PAXIP1Q6ZW49 1069 aaPredicted RBP4.86□□□□□ -1.63
AC008115.2-201ENST00000539988 BBXQ8WY36 941 aaPredicted RBP4.86□□□□□ -1.63
AC008115.2-201ENST00000539988 TSHZ2Q9NRE2 1034 aa4.86□□□□□ -1.63
AC008115.2-201ENST00000539988 SUPT5HO00267 1087 aaKnown RBP4.85□□□□□ -1.63
AC008115.2-201ENST00000539988 SLC4A2P04920 1241 aa4.85□□□□□ -1.63
AC008115.2-201ENST00000539988 TRIM26Q12899 539 aaPredicted RBP4.84□□□□□ -1.63
AC008115.2-201ENST00000539988 NPM2Q86SE8 214 aaKnown RBP4.83□□□□□ -1.64
AC008115.2-201ENST00000539988 CFAP44Q96MT7 982 aa4.83□□□□□ -1.64
AC008115.2-201ENST00000539988 HRCP23327 699 aa4.82□□□□□ -1.64
AC008115.2-201ENST00000539988 DNAJC5Q9H3Z4 198 aa4.82□□□□□ -1.64
AC008115.2-201ENST00000539988 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.82□□□□□ -1.64
AC008115.2-201ENST00000539988 FBXO3Q9UK99 471 aa4.81□□□□□ -1.64
AC008115.2-201ENST00000539988 UBTFP17480 764 aaKnown RBP4.8□□□□□ -1.64
AC008115.2-201ENST00000539988 IFNLR1Q8IU57 520 aaPredicted RBP4.8□□□□□ -1.64
AC008115.2-201ENST00000539988 NBR1Q14596 966 aa4.79□□□□□ -1.64
AC008115.2-201ENST00000539988 PIAS4Q8N2W9 510 aaPredicted RBP4.78□□□□□ -1.64
AC008115.2-201ENST00000539988 PELP1Q8IZL8 1130 aaKnown RBP4.77□□□□□ -1.65
AC008115.2-201ENST00000539988 VASPP50552 380 aaPredicted RBP4.76□□□□□ -1.65
AC008115.2-201ENST00000539988 TTBK1Q5TCY1 1321 aaPredicted RBP4.75□□□□□ -1.65
AC008115.2-201ENST00000539988 MYCNP04198 464 aaPredicted RBP4.75□□□□□ -1.65
AC008115.2-201ENST00000539988 SPRYD3Q8NCJ5 442 aa4.75□□□□□ -1.65
AC008115.2-201ENST00000539988 ATF5Q9Y2D1 282 aaPredicted RBP4.72□□□□□ -1.65
AC008115.2-201ENST00000539988 RNF216Q9NWF9 866 aaPredicted RBP4.71□□□□□ -1.66
AC008115.2-201ENST00000539988 SCAF1Q9H7N4 1312 aaKnown RBP4.71□□□□□ -1.66
AC008115.2-201ENST00000539988 PROM2Q8N271 834 aa4.7□□□□□ -1.66
AC008115.2-201ENST00000539988 LOC105371045A0A1W2PR82 267 aa4.69□□□□□ -1.66
AC008115.2-201ENST00000539988 MAPK8IP2Q13387 824 aaPredicted RBP4.69□□□□□ -1.66
AC008115.2-201ENST00000539988 TRHP20396 242 aaPredicted RBP4.67□□□□□ -1.66
AC008115.2-201ENST00000539988 RGL2O15211 777 aa4.66□□□□□ -1.66
AC008115.2-201ENST00000539988 BRPF1P55201 1214 aaPredicted RBP4.66□□□□□ -1.66
AC008115.2-201ENST00000539988 MYT1Q01538 1121 aa4.66□□□□□ -1.66
AC008115.2-201ENST00000539988 ECM2O94769 699 aaPredicted RBP4.65□□□□□ -1.67
AC008115.2-201ENST00000539988 SPDYE4A6NLX3 237 aa4.62□□□□□ -1.67
AC008115.2-201ENST00000539988 ZMYND15Q9H091 742 aa4.59□□□□□ -1.67
AC008115.2-201ENST00000539988 CHGAP10645 457 aaKnown RBP4.58□□□□□ -1.68
AC008115.2-201ENST00000539988 HOXD11P31277 338 aaPredicted RBP4.58□□□□□ -1.68
AC008115.2-201ENST00000539988 SPOCK2Q92563 424 aa4.57□□□□□ -1.68
AC008115.2-201ENST00000539988 C1orf115Q9H7X2 142 aa4.57□□□□□ -1.68
AC008115.2-201ENST00000539988 EIF5BO60841 1220 aaKnown RBP4.56□□□□□ -1.68
AC008115.2-201ENST00000539988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.56□□□□□ -1.68
AC008115.2-201ENST00000539988 NECTIN2Q92692 538 aa4.56□□□□□ -1.68
AC008115.2-201ENST00000539988 CCDC9Q9Y3X0 531 aaKnown RBP4.55□□□□□ -1.68
AC008115.2-201ENST00000539988 SHROOM4Q9ULL8 1493 aa4.55□□□□□ -1.68
AC008115.2-201ENST00000539988 RSPH6AQ9H0K4 717 aa4.54□□□□□ -1.68
AC008115.2-201ENST00000539988 IGSF3O75054 1194 aa4.53□□□□□ -1.68
AC008115.2-201ENST00000539988 MKRN4PQ13434 485 aaPredicted RBP4.53□□□□□ -1.68
AC008115.2-201ENST00000539988 NEUROD2Q15784 382 aa4.53□□□□□ -1.68
AC008115.2-201ENST00000539988 LMOD2Q6P5Q4 547 aa4.53□□□□□ -1.68
AC008115.2-201ENST00000539988 NKX1-1Q15270 411 aaPredicted RBP4.52□□□□□ -1.69
AC008115.2-201ENST00000539988 ARID3AQ99856 593 aa4.52□□□□□ -1.69
AC008115.2-201ENST00000539988 GTPBP6O43824 516 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms