RNA–Protein interactions for RNA: ENST00000528619.5

TPT1-209, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2

Gene TPT1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-209ENST00000528619 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
TPT1-209ENST00000528619 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
TPT1-209ENST00000528619 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
TPT1-209ENST00000528619 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
TPT1-209ENST00000528619 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
TPT1-209ENST00000528619 FOXD1Q16676 465 aa19.43■□□□□ 0.7
TPT1-209ENST00000528619 ADRA2BP18089 450 aa19.09■□□□□ 0.65
TPT1-209ENST00000528619 KCNA4P22459 653 aa18.94■□□□□ 0.62
TPT1-209ENST00000528619 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
TPT1-209ENST00000528619 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
TPT1-209ENST00000528619 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
TPT1-209ENST00000528619 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
TPT1-209ENST00000528619 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
TPT1-209ENST00000528619 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
TPT1-209ENST00000528619 PIAS4Q8N2W9 510 aaPredicted RBP18.21■□□□□ 0.51
TPT1-209ENST00000528619 MSH5O43196 834 aa17.9■□□□□ 0.46
TPT1-209ENST00000528619 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
TPT1-209ENST00000528619 CNKSR2Q8WXI2 1034 aa17.62■□□□□ 0.41
TPT1-209ENST00000528619 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
TPT1-209ENST00000528619 ZBTB22O15209 634 aa17.37■□□□□ 0.37
TPT1-209ENST00000528619 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
TPT1-209ENST00000528619 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
TPT1-209ENST00000528619 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
TPT1-209ENST00000528619 AMER1Q5JTC6 1135 aaPredicted RBP16.93■□□□□ 0.3
TPT1-209ENST00000528619 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
TPT1-209ENST00000528619 SLC24A1O60721 1099 aa16.9■□□□□ 0.3
TPT1-209ENST00000528619 RTN4Q9NQC3 1192 aaKnown RBP16.72■□□□□ 0.27
TPT1-209ENST00000528619 ATXN8OSP0DMR3 200 aa16.69■□□□□ 0.26
TPT1-209ENST00000528619 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
TPT1-209ENST00000528619 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
TPT1-209ENST00000528619 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
TPT1-209ENST00000528619 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
TPT1-209ENST00000528619 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
TPT1-209ENST00000528619 FKBP8Q14318 412 aa16.42■□□□□ 0.22
TPT1-209ENST00000528619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
TPT1-209ENST00000528619 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
TPT1-209ENST00000528619 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
TPT1-209ENST00000528619 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
TPT1-209ENST00000528619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
TPT1-209ENST00000528619 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
TPT1-209ENST00000528619 FBXO3Q9UK99 471 aa15.76■□□□□ 0.11
TPT1-209ENST00000528619 APLP2Q06481 763 aa15.67■□□□□ 0.1
TPT1-209ENST00000528619 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
TPT1-209ENST00000528619 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
TPT1-209ENST00000528619 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
TPT1-209ENST00000528619 SPDYE4A6NLX3 237 aa15.48■□□□□ 0.07
TPT1-209ENST00000528619 PROM2Q8N271 834 aa15.4■□□□□ 0.06
TPT1-209ENST00000528619 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
TPT1-209ENST00000528619 VASPP50552 380 aaPredicted RBP15.36■□□□□ 0.05
TPT1-209ENST00000528619 FBLN2P98095 1184 aa15.31■□□□□ 0.04
TPT1-209ENST00000528619 HAP1P54257 671 aaPredicted RBP15.23■□□□□ 0.03
TPT1-209ENST00000528619 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
TPT1-209ENST00000528619 BCANQ96GW7 911 aa15.21■□□□□ 0.03
TPT1-209ENST00000528619 IFNLR1Q8IU57 520 aaPredicted RBP15.18■□□□□ 0.02
TPT1-209ENST00000528619 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
TPT1-209ENST00000528619 DCAF8L2P0C7V8 631 aa15.17■□□□□ 0.02
TPT1-209ENST00000528619 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
TPT1-209ENST00000528619 PKD2Q13563 968 aa15.07■□□□□ 0
TPT1-209ENST00000528619 CACNB1Q02641 598 aaPredicted RBP15.05■□□□□ -0
TPT1-209ENST00000528619 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.02■□□□□ -0
TPT1-209ENST00000528619 ZBTB12Q9Y330 459 aaPredicted RBP15.01□□□□□ -0.01
TPT1-209ENST00000528619 POLA2Q14181 598 aa14.98□□□□□ -0.01
TPT1-209ENST00000528619 BBXQ8WY36 941 aaPredicted RBP14.98□□□□□ -0.01
TPT1-209ENST00000528619 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.01
TPT1-209ENST00000528619 SPOCK2Q92563 424 aa14.94□□□□□ -0.02
TPT1-209ENST00000528619 TAOK2Q9UL54 1235 aa14.92□□□□□ -0.02
TPT1-209ENST00000528619 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
TPT1-209ENST00000528619 KLHL34Q8N239 644 aa14.88□□□□□ -0.03
TPT1-209ENST00000528619 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
TPT1-209ENST00000528619 ECM2O94769 699 aaPredicted RBP14.84□□□□□ -0.03
TPT1-209ENST00000528619 CAPN15O75808 1086 aa14.81□□□□□ -0.04
TPT1-209ENST00000528619 PAXIP1Q6ZW49 1069 aaPredicted RBP14.77□□□□□ -0.05
TPT1-209ENST00000528619 PRKCSHP14314 528 aaPredicted RBP14.75□□□□□ -0.05
TPT1-209ENST00000528619 SPRYD3Q8NCJ5 442 aa14.71□□□□□ -0.05
TPT1-209ENST00000528619 CFAP44Q96MT7 982 aa14.71□□□□□ -0.05
TPT1-209ENST00000528619 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
TPT1-209ENST00000528619 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
TPT1-209ENST00000528619 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
TPT1-209ENST00000528619 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
TPT1-209ENST00000528619 TPRNQ4KMQ1 711 aa14.63□□□□□ -0.07
TPT1-209ENST00000528619 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
TPT1-209ENST00000528619 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
TPT1-209ENST00000528619 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
TPT1-209ENST00000528619 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
TPT1-209ENST00000528619 PLEKHG5O94827 1062 aa14.59□□□□□ -0.07
TPT1-209ENST00000528619 DSG3P32926 999 aa14.59□□□□□ -0.07
TPT1-209ENST00000528619 RGL2O15211 777 aa14.58□□□□□ -0.08
TPT1-209ENST00000528619 MIER1Q8N108 512 aa14.58□□□□□ -0.08
TPT1-209ENST00000528619 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
TPT1-209ENST00000528619 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
TPT1-209ENST00000528619 ABCB7O75027 752 aa14.52□□□□□ -0.09
TPT1-209ENST00000528619 TSHZ2Q9NRE2 1034 aa14.49□□□□□ -0.09
TPT1-209ENST00000528619 CHGAP10645 457 aaKnown RBP14.47□□□□□ -0.09
TPT1-209ENST00000528619 CIZ1Q9ULV3 898 aaPredicted RBP14.46□□□□□ -0.09
TPT1-209ENST00000528619 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
TPT1-209ENST00000528619 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
TPT1-209ENST00000528619 NBR1Q14596 966 aa14.42□□□□□ -0.1
TPT1-209ENST00000528619 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
TPT1-209ENST00000528619 HS6ST3Q8IZP7 471 aa14.38□□□□□ -0.11
TPT1-209ENST00000528619 GSE1Q14687 1217 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms