RNA–Protein interactions for RNA: ENST00000526943.1

CKAP5-207, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 4

Gene CKAP5, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-207ENST00000526943 AEBP2Q6ZN18 517 aaPredicted RBP13.37□□□□□ -0.27
CKAP5-207ENST00000526943 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
CKAP5-207ENST00000526943 CHIC1Q5VXU3 224 aa12.6□□□□□ -0.39
CKAP5-207ENST00000526943 SENP3Q9H4L4 574 aaPredicted RBP11.76□□□□□ -0.53
CKAP5-207ENST00000526943 PHF23Q9BUL5 403 aaPredicted RBP11.36□□□□□ -0.59
CKAP5-207ENST00000526943 FOXD1Q16676 465 aa11.09□□□□□ -0.63
CKAP5-207ENST00000526943 MSH5O43196 834 aa11.05□□□□□ -0.64
CKAP5-207ENST00000526943 CACNB1Q02641 598 aaPredicted RBP10.46□□□□□ -0.73
CKAP5-207ENST00000526943 POTEHQ6S545 545 aa10.2□□□□□ -0.78
CKAP5-207ENST00000526943 PIAS4Q8N2W9 510 aaPredicted RBP10.04□□□□□ -0.8
CKAP5-207ENST00000526943 PLPPR3Q6T4P5 718 aa9.85□□□□□ -0.83
CKAP5-207ENST00000526943 EHMT2Q96KQ7 1210 aa9.45□□□□□ -0.9
CKAP5-207ENST00000526943 KCNA4P22459 653 aa9.3□□□□□ -0.92
CKAP5-207ENST00000526943 RNF39Q9H2S5 420 aa9.23□□□□□ -0.93
CKAP5-207ENST00000526943 ADRA2BP18089 450 aa9.17□□□□□ -0.94
CKAP5-207ENST00000526943 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
CKAP5-207ENST00000526943 PPP6R1Q9UPN7 881 aa9.14□□□□□ -0.95
CKAP5-207ENST00000526943 CSRNP3Q8WYN3 585 aa9.08□□□□□ -0.96
CKAP5-207ENST00000526943 C1QBPQ07021 282 aaKnown RBP9.06□□□□□ -0.96
CKAP5-207ENST00000526943 DMRT2Q9Y5R5 561 aa9.04□□□□□ -0.96
CKAP5-207ENST00000526943 SLC4A1APQ9BWU0 796 aaKnown RBP8.96□□□□□ -0.98
CKAP5-207ENST00000526943 SLC24A1O60721 1099 aa8.87□□□□□ -0.99
CKAP5-207ENST00000526943 DCAF8L1A6NGE4 600 aa8.86□□□□□ -0.99
CKAP5-207ENST00000526943 SP7Q8TDD2 431 aaPredicted RBP8.84□□□□□ -0.99
CKAP5-207ENST00000526943 MAPK8IP2Q13387 824 aaPredicted RBP8.78□□□□□ -1
CKAP5-207ENST00000526943 PPP4R3CPQ6ZMV5 832 aa8.74□□□□□ -1.01
CKAP5-207ENST00000526943 NCBP3Q53F19 620 aaKnown RBP8.7□□□□□ -1.02
CKAP5-207ENST00000526943 AMER1Q5JTC6 1135 aaPredicted RBP8.62□□□□□ -1.03
CKAP5-207ENST00000526943 NPM3O75607 178 aaKnown RBP8.6□□□□□ -1.03
CKAP5-207ENST00000526943 RTN4Q9NQC3 1192 aaKnown RBP8.6□□□□□ -1.03
CKAP5-207ENST00000526943 ZBTB22O15209 634 aa8.59□□□□□ -1.03
CKAP5-207ENST00000526943 SCAF1Q9H7N4 1312 aaKnown RBP8.42□□□□□ -1.06
CKAP5-207ENST00000526943 FOXD4L1Q9NU39 408 aa8.38□□□□□ -1.07
CKAP5-207ENST00000526943 CNKSR2Q8WXI2 1034 aa8.36□□□□□ -1.07
CKAP5-207ENST00000526943 DNAJC5BQ9UF47 199 aa8.36□□□□□ -1.07
CKAP5-207ENST00000526943 LHX8Q68G74 356 aa8.28□□□□□ -1.08
CKAP5-207ENST00000526943 CHRDL2Q6WN34 429 aa8.28□□□□□ -1.08
CKAP5-207ENST00000526943 FKBP8Q14318 412 aa8.13□□□□□ -1.11
CKAP5-207ENST00000526943 DSG3P32926 999 aa8.12□□□□□ -1.11
CKAP5-207ENST00000526943 HAX1O00165 279 aa8.09□□□□□ -1.11
CKAP5-207ENST00000526943 HOXD11P31277 338 aaPredicted RBP8.08□□□□□ -1.12
CKAP5-207ENST00000526943 ATXN8OSP0DMR3 200 aa8.05□□□□□ -1.12
CKAP5-207ENST00000526943 RNF216Q9NWF9 866 aaPredicted RBP8.05□□□□□ -1.12
CKAP5-207ENST00000526943 SLC4A2P04920 1241 aa7.96□□□□□ -1.14
CKAP5-207ENST00000526943 MYCNP04198 464 aaPredicted RBP7.94□□□□□ -1.14
CKAP5-207ENST00000526943 PLCB2Q00722 1185 aa7.91□□□□□ -1.14
CKAP5-207ENST00000526943 POTEMA6NI47 508 aa7.89□□□□□ -1.15
CKAP5-207ENST00000526943 PCDH10Q9P2E7 1040 aa7.89□□□□□ -1.15
CKAP5-207ENST00000526943 CAPN15O75808 1086 aa7.88□□□□□ -1.15
CKAP5-207ENST00000526943 RBM42Q9BTD8 480 aaKnown RBP7.88□□□□□ -1.15
CKAP5-207ENST00000526943 POTEGQ6S5H5 508 aa7.81□□□□□ -1.16
CKAP5-207ENST00000526943 BCANQ96GW7 911 aa7.81□□□□□ -1.16
CKAP5-207ENST00000526943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.8□□□□□ -1.162e-9■■■■■ 34.9
CKAP5-207ENST00000526943 PRKCSHP14314 528 aaPredicted RBP7.75□□□□□ -1.17
CKAP5-207ENST00000526943 TAOK2Q9UL54 1235 aa7.75□□□□□ -1.17
CKAP5-207ENST00000526943 HAP1P54257 671 aaPredicted RBP7.74□□□□□ -1.17
CKAP5-207ENST00000526943 EVX2Q03828 476 aa7.73□□□□□ -1.17
CKAP5-207ENST00000526943 SPINK5Q9NQ38 1064 aaPredicted RBP7.73□□□□□ -1.17
CKAP5-207ENST00000526943 PIP4P2Q8N4L2 257 aa7.72□□□□□ -1.17
CKAP5-207ENST00000526943 VSIG10Q8N0Z9 540 aa7.7□□□□□ -1.18
CKAP5-207ENST00000526943 FBXO3Q9UK99 471 aa7.68□□□□□ -1.18
CKAP5-207ENST00000526943 ATF5Q9Y2D1 282 aaPredicted RBP7.65□□□□□ -1.18
CKAP5-207ENST00000526943 TPRNQ4KMQ1 711 aa7.59□□□□□ -1.19
CKAP5-207ENST00000526943 VASPP50552 380 aaPredicted RBP7.57□□□□□ -1.2
CKAP5-207ENST00000526943 PROM2Q8N271 834 aa7.56□□□□□ -1.2
CKAP5-207ENST00000526943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.55□□□□□ -1.2
CKAP5-207ENST00000526943 DCAF8L2P0C7V8 631 aa7.55□□□□□ -1.2
CKAP5-207ENST00000526943 HNRNPUL2Q1KMD3 747 aaKnown RBP7.55□□□□□ -1.2
CKAP5-207ENST00000526943 SAMD1Q6SPF0 538 aaPredicted RBP7.55□□□□□ -1.2
CKAP5-207ENST00000526943 GABBR2O75899 941 aa7.54□□□□□ -1.2
CKAP5-207ENST00000526943 PKD2Q13563 968 aa7.53□□□□□ -1.2
CKAP5-207ENST00000526943 KDM2AQ9Y2K7 1162 aa7.53□□□□□ -1.2
CKAP5-207ENST00000526943 ABCB7O75027 752 aa7.51□□□□□ -1.21
CKAP5-207ENST00000526943 IFNLR1Q8IU57 520 aaPredicted RBP7.51□□□□□ -1.21
CKAP5-207ENST00000526943 SPDYE4A6NLX3 237 aa7.5□□□□□ -1.21
CKAP5-207ENST00000526943 BBXQ8WY36 941 aaPredicted RBP7.48□□□□□ -1.21
CKAP5-207ENST00000526943 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.47□□□□□ -1.21
CKAP5-207ENST00000526943 FBLN2P98095 1184 aa7.46□□□□□ -1.22
CKAP5-207ENST00000526943 ZNF219Q9P2Y4 722 aaPredicted RBP7.44□□□□□ -1.22
CKAP5-207ENST00000526943 TIMELESSQ9UNS1 1208 aa7.42□□□□□ -1.22
CKAP5-207ENST00000526943 U3KPZ7 1027 aaPredicted RBP7.42□□□□□ -1.22
CKAP5-207ENST00000526943 FXR2P51116 673 aaKnown RBP eCLIP7.41□□□□□ -1.221e-6■■□□□ 11.4
CKAP5-207ENST00000526943 DAXXQ9UER7 740 aaPredicted RBP7.41□□□□□ -1.22
CKAP5-207ENST00000526943 PAXIP1Q6ZW49 1069 aaPredicted RBP7.4□□□□□ -1.22
CKAP5-207ENST00000526943 NPM1P06748 294 aaKnown RBP eCLIP7.38□□□□□ -1.23
CKAP5-207ENST00000526943 MKRN4PQ13434 485 aaPredicted RBP7.38□□□□□ -1.23
CKAP5-207ENST00000526943 ARXQ96QS3 562 aa7.38□□□□□ -1.23
CKAP5-207ENST00000526943 TRHP20396 242 aaPredicted RBP7.37□□□□□ -1.23
CKAP5-207ENST00000526943 CFAP44Q96MT7 982 aa7.37□□□□□ -1.23
CKAP5-207ENST00000526943 TULP1O00294 542 aaPredicted RBP7.35□□□□□ -1.23
CKAP5-207ENST00000526943 OTUD5Q96G74 571 aa7.35□□□□□ -1.23
CKAP5-207ENST00000526943 ERICH6Q7L0X2 663 aa7.34□□□□□ -1.23
CKAP5-207ENST00000526943 AKT1S1Q96B36 256 aa7.33□□□□□ -1.24
CKAP5-207ENST00000526943 DNAJC5Q9H3Z4 198 aa7.33□□□□□ -1.24
CKAP5-207ENST00000526943 ECM2O94769 699 aaPredicted RBP7.32□□□□□ -1.24
CKAP5-207ENST00000526943 SPRYD3Q8NCJ5 442 aa7.32□□□□□ -1.24
CKAP5-207ENST00000526943 TSHZ2Q9NRE2 1034 aa7.31□□□□□ -1.24
CKAP5-207ENST00000526943 APLP2Q06481 763 aa7.3□□□□□ -1.24
CKAP5-207ENST00000526943 SPOCK2Q92563 424 aa7.3□□□□□ -1.24
CKAP5-207ENST00000526943 GTF3C3Q9Y5Q9 886 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms