RNA–Protein interactions for RNA: ENST00000521364.5

CSNK1G3-210, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CSNK1G3, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-210ENST00000521364 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.23
CSNK1G3-210ENST00000521364 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
CSNK1G3-210ENST00000521364 PHF23Q9BUL5 403 aaPredicted RBP14.19□□□□□ -0.14
CSNK1G3-210ENST00000521364 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
CSNK1G3-210ENST00000521364 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.3
CSNK1G3-210ENST00000521364 FOXD1Q16676 465 aa12.94□□□□□ -0.34
CSNK1G3-210ENST00000521364 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.34
CSNK1G3-210ENST00000521364 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
CSNK1G3-210ENST00000521364 KCNA4P22459 653 aa12.65□□□□□ -0.39
CSNK1G3-210ENST00000521364 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.4
CSNK1G3-210ENST00000521364 ADRA2BP18089 450 aa12.55□□□□□ -0.4
CSNK1G3-210ENST00000521364 CSRNP3Q8WYN3 585 aa12.49□□□□□ -0.41
CSNK1G3-210ENST00000521364 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
CSNK1G3-210ENST00000521364 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
CSNK1G3-210ENST00000521364 SLC4A1APQ9BWU0 796 aaKnown RBP12.14□□□□□ -0.47
CSNK1G3-210ENST00000521364 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
CSNK1G3-210ENST00000521364 ZBTB22O15209 634 aa11.72□□□□□ -0.53
CSNK1G3-210ENST00000521364 MSH5O43196 834 aa11.7□□□□□ -0.54
CSNK1G3-210ENST00000521364 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
CSNK1G3-210ENST00000521364 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
CSNK1G3-210ENST00000521364 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
CSNK1G3-210ENST00000521364 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
CSNK1G3-210ENST00000521364 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
CSNK1G3-210ENST00000521364 FKBP8Q14318 412 aa11.2□□□□□ -0.62
CSNK1G3-210ENST00000521364 FOXD4L1Q9NU39 408 aa11.18□□□□□ -0.62
CSNK1G3-210ENST00000521364 SCAF1Q9H7N4 1312 aaKnown RBP11.13□□□□□ -0.63
CSNK1G3-210ENST00000521364 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
CSNK1G3-210ENST00000521364 PLCB2Q00722 1185 aa11.08□□□□□ -0.64
CSNK1G3-210ENST00000521364 CNKSR2Q8WXI2 1034 aa11.03□□□□□ -0.64
CSNK1G3-210ENST00000521364 BCANQ96GW7 911 aa11.03□□□□□ -0.64
CSNK1G3-210ENST00000521364 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
CSNK1G3-210ENST00000521364 DAXXQ9UER7 740 aaPredicted RBP11□□□□□ -0.65
CSNK1G3-210ENST00000521364 HAP1P54257 671 aaPredicted RBP10.97□□□□□ -0.65
CSNK1G3-210ENST00000521364 TPRNQ4KMQ1 711 aa10.92□□□□□ -0.66
CSNK1G3-210ENST00000521364 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
CSNK1G3-210ENST00000521364 POTEDQ86YR6 584 aa10.82□□□□□ -0.68
CSNK1G3-210ENST00000521364 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
CSNK1G3-210ENST00000521364 HOXD11P31277 338 aaPredicted RBP10.77□□□□□ -0.69
CSNK1G3-210ENST00000521364 TULP1O00294 542 aaPredicted RBP10.76□□□□□ -0.69
CSNK1G3-210ENST00000521364 DCAF8L1A6NGE4 600 aa10.72□□□□□ -0.69
CSNK1G3-210ENST00000521364 VSIG10Q8N0Z9 540 aa10.72□□□□□ -0.69
CSNK1G3-210ENST00000521364 ARXQ96QS3 562 aa10.72□□□□□ -0.69
CSNK1G3-210ENST00000521364 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
CSNK1G3-210ENST00000521364 KDM2AQ9Y2K7 1162 aa10.65□□□□□ -0.7
CSNK1G3-210ENST00000521364 DCAF8L2P0C7V8 631 aa10.64□□□□□ -0.71
CSNK1G3-210ENST00000521364 FBLN2P98095 1184 aa10.59□□□□□ -0.71
CSNK1G3-210ENST00000521364 SLC4A2P04920 1241 aa10.58□□□□□ -0.72
CSNK1G3-210ENST00000521364 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
CSNK1G3-210ENST00000521364 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
CSNK1G3-210ENST00000521364 HOMEZQ8IX15 550 aa10.45□□□□□ -0.74
CSNK1G3-210ENST00000521364 MYCNP04198 464 aaPredicted RBP10.43□□□□□ -0.74
CSNK1G3-210ENST00000521364 PKD2Q13563 968 aa10.37□□□□□ -0.75
CSNK1G3-210ENST00000521364 PAXIP1Q6ZW49 1069 aaPredicted RBP10.36□□□□□ -0.75
CSNK1G3-210ENST00000521364 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
CSNK1G3-210ENST00000521364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.75
CSNK1G3-210ENST00000521364 TMEM132AQ24JP5 1023 aa10.32□□□□□ -0.76
CSNK1G3-210ENST00000521364 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
CSNK1G3-210ENST00000521364 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
CSNK1G3-210ENST00000521364 IFNLR1Q8IU57 520 aaPredicted RBP10.29□□□□□ -0.76
CSNK1G3-210ENST00000521364 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
CSNK1G3-210ENST00000521364 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
CSNK1G3-210ENST00000521364 BBXQ8WY36 941 aaPredicted RBP10.27□□□□□ -0.76
CSNK1G3-210ENST00000521364 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.76
CSNK1G3-210ENST00000521364 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.77
CSNK1G3-210ENST00000521364 VASPP50552 380 aaPredicted RBP10.26□□□□□ -0.77
CSNK1G3-210ENST00000521364 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
CSNK1G3-210ENST00000521364 C14orf37Q86TY3 774 aa10.23□□□□□ -0.77
CSNK1G3-210ENST00000521364 NBR1Q14596 966 aa10.19□□□□□ -0.78
CSNK1G3-210ENST00000521364 PODXL2Q9NZ53 605 aa10.16□□□□□ -0.78
CSNK1G3-210ENST00000521364 RNF39Q9H2S5 420 aa10.15□□□□□ -0.79
CSNK1G3-210ENST00000521364 RANGAP1P46060 587 aaPredicted RBP10.12□□□□□ -0.79
CSNK1G3-210ENST00000521364 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
CSNK1G3-210ENST00000521364 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
CSNK1G3-210ENST00000521364 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
CSNK1G3-210ENST00000521364 SPINK5Q9NQ38 1064 aaPredicted RBP10.05□□□□□ -0.8
CSNK1G3-210ENST00000521364 ECM2O94769 699 aaPredicted RBP10.04□□□□□ -0.8
CSNK1G3-210ENST00000521364 PROM2Q8N271 834 aa10.03□□□□□ -0.8
CSNK1G3-210ENST00000521364 DNAJC5Q9H3Z4 198 aa10.03□□□□□ -0.8
CSNK1G3-210ENST00000521364 RGL2O15211 777 aa9.99□□□□□ -0.81
CSNK1G3-210ENST00000521364 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
CSNK1G3-210ENST00000521364 TRHP20396 242 aaPredicted RBP9.91□□□□□ -0.82
CSNK1G3-210ENST00000521364 C1QBPQ07021 282 aaKnown RBP9.91□□□□□ -0.82
CSNK1G3-210ENST00000521364 CAPN15O75808 1086 aa9.9□□□□□ -0.82
CSNK1G3-210ENST00000521364 CACNB1Q02641 598 aaPredicted RBP9.9□□□□□ -0.82
CSNK1G3-210ENST00000521364 UBTFP17480 764 aaKnown RBP9.89□□□□□ -0.83
CSNK1G3-210ENST00000521364 TRIM26Q12899 539 aaPredicted RBP9.88□□□□□ -0.83
CSNK1G3-210ENST00000521364 CHGAP10645 457 aaKnown RBP9.88□□□□□ -0.83
CSNK1G3-210ENST00000521364 SAMD1Q6SPF0 538 aaPredicted RBP9.88□□□□□ -0.83
CSNK1G3-210ENST00000521364 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
CSNK1G3-210ENST00000521364 NPM2Q86SE8 214 aaKnown RBP9.85□□□□□ -0.83
CSNK1G3-210ENST00000521364 SPOCK2Q92563 424 aa9.85□□□□□ -0.83
CSNK1G3-210ENST00000521364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.84□□□□□ -0.83
CSNK1G3-210ENST00000521364 HNRNPUL2Q1KMD3 747 aaKnown RBP9.84□□□□□ -0.83
CSNK1G3-210ENST00000521364 ZNF219Q9P2Y4 722 aaPredicted RBP9.84□□□□□ -0.83
CSNK1G3-210ENST00000521364 ABCB7O75027 752 aa9.83□□□□□ -0.84
CSNK1G3-210ENST00000521364 HRCP23327 699 aa9.78□□□□□ -0.84
CSNK1G3-210ENST00000521364 BRPF1P55201 1214 aaPredicted RBP9.75□□□□□ -0.85
CSNK1G3-210ENST00000521364 POLA2Q14181 598 aa9.71□□□□□ -0.85
CSNK1G3-210ENST00000521364 DSG3P32926 999 aa9.7□□□□□ -0.86
CSNK1G3-210ENST00000521364 APLP2Q06481 763 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 448.5 ms