RNA–Protein interactions for RNA: ENST00000515062.5

SEC31A-240, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-240ENST00000515062 AEBP2Q6ZN18 517 aaPredicted RBP21.05■□□□□ 0.96
SEC31A-240ENST00000515062 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
SEC31A-240ENST00000515062 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
SEC31A-240ENST00000515062 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
SEC31A-240ENST00000515062 FOXD1Q16676 465 aa16.7■□□□□ 0.26
SEC31A-240ENST00000515062 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
SEC31A-240ENST00000515062 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
SEC31A-240ENST00000515062 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
SEC31A-240ENST00000515062 ADRA2BP18089 450 aa15.6■□□□□ 0.09
SEC31A-240ENST00000515062 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
SEC31A-240ENST00000515062 MSH5O43196 834 aa15.5■□□□□ 0.07
SEC31A-240ENST00000515062 KCNA4P22459 653 aa14.54□□□□□ -0.08
SEC31A-240ENST00000515062 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
SEC31A-240ENST00000515062 MAPK8IP2Q13387 824 aaPredicted RBP14.36□□□□□ -0.11
SEC31A-240ENST00000515062 DMRT2Q9Y5R5 561 aa14.16□□□□□ -0.14
SEC31A-240ENST00000515062 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
SEC31A-240ENST00000515062 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
SEC31A-240ENST00000515062 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
SEC31A-240ENST00000515062 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
SEC31A-240ENST00000515062 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
SEC31A-240ENST00000515062 NPM3O75607 178 aaKnown RBP13.7□□□□□ -0.22
SEC31A-240ENST00000515062 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
SEC31A-240ENST00000515062 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
SEC31A-240ENST00000515062 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
SEC31A-240ENST00000515062 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
SEC31A-240ENST00000515062 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
SEC31A-240ENST00000515062 ZBTB22O15209 634 aa13.36□□□□□ -0.27
SEC31A-240ENST00000515062 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
SEC31A-240ENST00000515062 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
SEC31A-240ENST00000515062 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
SEC31A-240ENST00000515062 C1QBPQ07021 282 aaKnown RBP13.03□□□□□ -0.32
SEC31A-240ENST00000515062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.331e-13■□□□□ 11
SEC31A-240ENST00000515062 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
SEC31A-240ENST00000515062 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
SEC31A-240ENST00000515062 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
SEC31A-240ENST00000515062 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
SEC31A-240ENST00000515062 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
SEC31A-240ENST00000515062 MYCNP04198 464 aaPredicted RBP12.73□□□□□ -0.37
SEC31A-240ENST00000515062 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
SEC31A-240ENST00000515062 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
SEC31A-240ENST00000515062 FKBP8Q14318 412 aa12.56□□□□□ -0.4
SEC31A-240ENST00000515062 POTEHQ6S545 545 aa12.54□□□□□ -0.4
SEC31A-240ENST00000515062 CAPN15O75808 1086 aa12.53□□□□□ -0.4
SEC31A-240ENST00000515062 DSG3P32926 999 aa12.47□□□□□ -0.41
SEC31A-240ENST00000515062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.35□□□□□ -0.43
SEC31A-240ENST00000515062 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
SEC31A-240ENST00000515062 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
SEC31A-240ENST00000515062 ABCB7O75027 752 aa12.3□□□□□ -0.44
SEC31A-240ENST00000515062 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
SEC31A-240ENST00000515062 ZNF219Q9P2Y4 722 aaPredicted RBP12.24□□□□□ -0.45
SEC31A-240ENST00000515062 APLP2Q06481 763 aa12.23□□□□□ -0.45
SEC31A-240ENST00000515062 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
SEC31A-240ENST00000515062 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
SEC31A-240ENST00000515062 POLA2Q14181 598 aa12.01□□□□□ -0.49
SEC31A-240ENST00000515062 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
SEC31A-240ENST00000515062 PROM2Q8N271 834 aa11.84□□□□□ -0.51
SEC31A-240ENST00000515062 PLCB2Q00722 1185 aa11.79□□□□□ -0.52
SEC31A-240ENST00000515062 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
SEC31A-240ENST00000515062 FBLN2P98095 1184 aa11.78□□□□□ -0.52
SEC31A-240ENST00000515062 VASPP50552 380 aaPredicted RBP11.77□□□□□ -0.53
SEC31A-240ENST00000515062 MKRN4PQ13434 485 aaPredicted RBP11.72□□□□□ -0.53
SEC31A-240ENST00000515062 OSCARQ8IYS5 282 aa11.66□□□□□ -0.54
SEC31A-240ENST00000515062 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
SEC31A-240ENST00000515062 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
SEC31A-240ENST00000515062 CHRDL2Q6WN34 429 aa11.61□□□□□ -0.55
SEC31A-240ENST00000515062 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
SEC31A-240ENST00000515062 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
SEC31A-240ENST00000515062 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
SEC31A-240ENST00000515062 PKD2Q13563 968 aa11.53□□□□□ -0.56
SEC31A-240ENST00000515062 BCANQ96GW7 911 aa11.53□□□□□ -0.56
SEC31A-240ENST00000515062 VSIG10Q8N0Z9 540 aa11.52□□□□□ -0.57
SEC31A-240ENST00000515062 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
SEC31A-240ENST00000515062 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
SEC31A-240ENST00000515062 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
SEC31A-240ENST00000515062 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
SEC31A-240ENST00000515062 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
SEC31A-240ENST00000515062 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
SEC31A-240ENST00000515062 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
SEC31A-240ENST00000515062 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
SEC31A-240ENST00000515062 ECM2O94769 699 aaPredicted RBP11.35□□□□□ -0.59
SEC31A-240ENST00000515062 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
SEC31A-240ENST00000515062 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
SEC31A-240ENST00000515062 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
SEC31A-240ENST00000515062 TAOK2Q9UL54 1235 aa11.3□□□□□ -0.6
SEC31A-240ENST00000515062 ZNF692Q9BU19 519 aaPredicted RBP11.28□□□□□ -0.6
SEC31A-240ENST00000515062 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
SEC31A-240ENST00000515062 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
SEC31A-240ENST00000515062 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
SEC31A-240ENST00000515062 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
SEC31A-240ENST00000515062 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
SEC31A-240ENST00000515062 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
SEC31A-240ENST00000515062 SPRYD3Q8NCJ5 442 aa11.2□□□□□ -0.62
SEC31A-240ENST00000515062 CFAP44Q96MT7 982 aa11.2□□□□□ -0.62
SEC31A-240ENST00000515062 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
SEC31A-240ENST00000515062 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
SEC31A-240ENST00000515062 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
SEC31A-240ENST00000515062 MIER1Q8N108 512 aa11.18□□□□□ -0.62
SEC31A-240ENST00000515062 RGL2O15211 777 aa11.16□□□□□ -0.62
SEC31A-240ENST00000515062 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
SEC31A-240ENST00000515062 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms