RNA–Protein interactions for RNA: ENST00000505507.6

PDE4D-213, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-213ENST00000505507 CHIC1Q5VXU3 224 aa14.1□□□□□ -0.15
PDE4D-213ENST00000505507 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
PDE4D-213ENST00000505507 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
PDE4D-213ENST00000505507 PHF23Q9BUL5 403 aaPredicted RBP12.45□□□□□ -0.42
PDE4D-213ENST00000505507 SENP3Q9H4L4 574 aaPredicted RBP11.85□□□□□ -0.51
PDE4D-213ENST00000505507 PLPPR3Q6T4P5 718 aa11.64□□□□□ -0.55
PDE4D-213ENST00000505507 FOXD1Q16676 465 aa10.93□□□□□ -0.66
PDE4D-213ENST00000505507 ADRA2BP18089 450 aa10.88□□□□□ -0.67
PDE4D-213ENST00000505507 PPP6R1Q9UPN7 881 aa10.85□□□□□ -0.67
PDE4D-213ENST00000505507 KCNA4P22459 653 aa10.52□□□□□ -0.73
PDE4D-213ENST00000505507 MSH5O43196 834 aa10.5□□□□□ -0.73
PDE4D-213ENST00000505507 PIAS4Q8N2W9 510 aaPredicted RBP10.41□□□□□ -0.74
PDE4D-213ENST00000505507 PPP4R3CPQ6ZMV5 832 aa10.3□□□□□ -0.76
PDE4D-213ENST00000505507 EHMT2Q96KQ7 1210 aa10.26□□□□□ -0.77
PDE4D-213ENST00000505507 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
PDE4D-213ENST00000505507 SLC4A1APQ9BWU0 796 aaKnown RBP10.1□□□□□ -0.79
PDE4D-213ENST00000505507 NPM3O75607 178 aaKnown RBP10□□□□□ -0.81
PDE4D-213ENST00000505507 CSRNP3Q8WYN3 585 aa9.98□□□□□ -0.81
PDE4D-213ENST00000505507 SCAF1Q9H7N4 1312 aaKnown RBP9.95□□□□□ -0.82
PDE4D-213ENST00000505507 CACNB1Q02641 598 aaPredicted RBP9.94□□□□□ -0.82
PDE4D-213ENST00000505507 CNKSR2Q8WXI2 1034 aa9.93□□□□□ -0.82
PDE4D-213ENST00000505507 MAPK8IP2Q13387 824 aaPredicted RBP9.73□□□□□ -0.85
PDE4D-213ENST00000505507 ZBTB22O15209 634 aa9.7□□□□□ -0.86
PDE4D-213ENST00000505507 DNAJC5BQ9UF47 199 aa9.7□□□□□ -0.86
PDE4D-213ENST00000505507 POTEHQ6S545 545 aa9.68□□□□□ -0.86
PDE4D-213ENST00000505507 RNF216Q9NWF9 866 aaPredicted RBP9.64□□□□□ -0.87
PDE4D-213ENST00000505507 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
PDE4D-213ENST00000505507 DMRT2Q9Y5R5 561 aa9.52□□□□□ -0.89
PDE4D-213ENST00000505507 HOXD11P31277 338 aaPredicted RBP9.49□□□□□ -0.89
PDE4D-213ENST00000505507 SLC4A2P04920 1241 aa9.35□□□□□ -0.91
PDE4D-213ENST00000505507 MYCNP04198 464 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-213ENST00000505507 ATXN8OSP0DMR3 200 aa9.22□□□□□ -0.93
PDE4D-213ENST00000505507 DCAF8L1A6NGE4 600 aa9.06□□□□□ -0.96
PDE4D-213ENST00000505507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.03□□□□□ -0.965e-6■■■■□ 19.5
PDE4D-213ENST00000505507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.98□□□□□ -0.97
PDE4D-213ENST00000505507 FKBP8Q14318 412 aa8.98□□□□□ -0.97
PDE4D-213ENST00000505507 HNRNPUL2Q1KMD3 747 aaKnown RBP8.98□□□□□ -0.97
PDE4D-213ENST00000505507 SAMD1Q6SPF0 538 aaPredicted RBP8.96□□□□□ -0.98
PDE4D-213ENST00000505507 ATF5Q9Y2D1 282 aaPredicted RBP8.95□□□□□ -0.98
PDE4D-213ENST00000505507 U3KPZ7 1027 aaPredicted RBP8.93□□□□□ -0.98
PDE4D-213ENST00000505507 AMER1Q5JTC6 1135 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-213ENST00000505507 RTN4Q9NQC3 1192 aaKnown RBP8.91□□□□□ -0.98
PDE4D-213ENST00000505507 RNF39Q9H2S5 420 aa8.8□□□□□ -1
PDE4D-213ENST00000505507 APLP2Q06481 763 aa8.77□□□□□ -1.01
PDE4D-213ENST00000505507 ZNF219Q9P2Y4 722 aaPredicted RBP8.77□□□□□ -1.01
PDE4D-213ENST00000505507 SLC24A1O60721 1099 aa8.71□□□□□ -1.02
PDE4D-213ENST00000505507 PLSCR2Q9NRY7 297 aa8.68□□□□□ -1.02
PDE4D-213ENST00000505507 C1QBPQ07021 282 aaKnown RBP8.61□□□□□ -1.03
PDE4D-213ENST00000505507 SPDYE4A6NLX3 237 aa8.59□□□□□ -1.03
PDE4D-213ENST00000505507 MKRN4PQ13434 485 aaPredicted RBP8.59□□□□□ -1.03
PDE4D-213ENST00000505507 FBXO3Q9UK99 471 aa8.57□□□□□ -1.04
PDE4D-213ENST00000505507 TRHP20396 242 aaPredicted RBP8.55□□□□□ -1.04
PDE4D-213ENST00000505507 FBLN2P98095 1184 aa8.55□□□□□ -1.04
PDE4D-213ENST00000505507 SPINK5Q9NQ38 1064 aaPredicted RBP8.55□□□□□ -1.04
PDE4D-213ENST00000505507 POLA2Q14181 598 aa8.53□□□□□ -1.04
PDE4D-213ENST00000505507 PROM2Q8N271 834 aa8.53□□□□□ -1.04
PDE4D-213ENST00000505507 CAPN15O75808 1086 aa8.49□□□□□ -1.05
PDE4D-213ENST00000505507 VASPP50552 380 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-213ENST00000505507 ZBTB12Q9Y330 459 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-213ENST00000505507 SP7Q8TDD2 431 aaPredicted RBP8.39□□□□□ -1.07
PDE4D-213ENST00000505507 ABCB7O75027 752 aa8.36□□□□□ -1.07
PDE4D-213ENST00000505507 IFNLR1Q8IU57 520 aaPredicted RBP8.35□□□□□ -1.07
PDE4D-213ENST00000505507 NISCHQ9Y2I1 1504 aa8.31□□□□□ -1.08
PDE4D-213ENST00000505507 DSG3P32926 999 aa8.27□□□□□ -1.09
PDE4D-213ENST00000505507 ZNF692Q9BU19 519 aaPredicted RBP8.25□□□□□ -1.09
PDE4D-213ENST00000505507 PKD2Q13563 968 aa8.24□□□□□ -1.09
PDE4D-213ENST00000505507 SPDYE2BA6NHP3 402 aa8.23□□□□□ -1.09
PDE4D-213ENST00000505507 SPDYE6P0CI01 402 aa8.23□□□□□ -1.09
PDE4D-213ENST00000505507 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
PDE4D-213ENST00000505507 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
PDE4D-213ENST00000505507 STAG3Q9UJ98 1225 aa8.22□□□□□ -1.09
PDE4D-213ENST00000505507 SSUH2Q9Y2M2 353 aa8.21□□□□□ -1.1
PDE4D-213ENST00000505507 OSCARQ8IYS5 282 aa8.2□□□□□ -1.1
PDE4D-213ENST00000505507 DCAF8L2P0C7V8 631 aa8.18□□□□□ -1.1
PDE4D-213ENST00000505507 KLHL34Q8N239 644 aa8.18□□□□□ -1.1
PDE4D-213ENST00000505507 SPOCK2Q92563 424 aa8.18□□□□□ -1.1
PDE4D-213ENST00000505507 PABPN1Q86U42 306 aaKnown RBP eCLIP8.15□□□□□ -1.1
PDE4D-213ENST00000505507 PLCD3Q8N3E9 789 aa8.13□□□□□ -1.11
PDE4D-213ENST00000505507 MIER1Q8N108 512 aa8.1□□□□□ -1.11
PDE4D-213ENST00000505507 ECM2O94769 699 aaPredicted RBP8.09□□□□□ -1.11
PDE4D-213ENST00000505507 HAP1P54257 671 aaPredicted RBP8.09□□□□□ -1.11
PDE4D-213ENST00000505507 BBXQ8WY36 941 aaPredicted RBP8.04□□□□□ -1.12
PDE4D-213ENST00000505507 PLEKHG5O94827 1062 aa8.03□□□□□ -1.12
PDE4D-213ENST00000505507 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
PDE4D-213ENST00000505507 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.02□□□□□ -1.13
PDE4D-213ENST00000505507 RGL2O15211 777 aa8.01□□□□□ -1.13
PDE4D-213ENST00000505507 NPM1P06748 294 aaKnown RBP eCLIP8.01□□□□□ -1.13
PDE4D-213ENST00000505507 VSIG10Q8N0Z9 540 aa8□□□□□ -1.13
PDE4D-213ENST00000505507 CIZ1Q9ULV3 898 aaPredicted RBP7.97□□□□□ -1.13
PDE4D-213ENST00000505507 PAXIP1Q6ZW49 1069 aaPredicted RBP7.95□□□□□ -1.14
PDE4D-213ENST00000505507 TRIM41Q8WV44 630 aa7.94□□□□□ -1.14
PDE4D-213ENST00000505507 BCANQ96GW7 911 aa7.93□□□□□ -1.14
PDE4D-213ENST00000505507 CFAP44Q96MT7 982 aa7.92□□□□□ -1.14
PDE4D-213ENST00000505507 SPRYD3Q8NCJ5 442 aa7.91□□□□□ -1.14
PDE4D-213ENST00000505507 KDM2AQ9Y2K7 1162 aa7.9□□□□□ -1.14
PDE4D-213ENST00000505507 CHGAP10645 457 aaKnown RBP7.89□□□□□ -1.15
PDE4D-213ENST00000505507 GSE1Q14687 1217 aa7.88□□□□□ -1.15
PDE4D-213ENST00000505507 CHRDL2Q6WN34 429 aa7.88□□□□□ -1.15
PDE4D-213ENST00000505507 SPDYE1Q8NFV5 336 aaPredicted RBP7.88□□□□□ -1.15
PDE4D-213ENST00000505507 LHX8Q68G74 356 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms