RNA–Protein interactions for RNA: ENST00000505330.5

ATP2C1-210, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 4,888 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-210ENST00000505330 ABCC8Q09428 1581 aa7.39□□□□□ -1.23
ATP2C1-210ENST00000505330 SENP3-EIF4A1A0A087X0R7 540 aa7.38□□□□□ -1.23
ATP2C1-210ENST00000505330 SIN3AQ96ST3 1273 aa7.37□□□□□ -1.23
ATP2C1-210ENST00000505330 CCDC88BA6NC98 1476 aa7.37□□□□□ -1.23
ATP2C1-210ENST00000505330 MRS2Q9HD23 443 aa7.37□□□□□ -1.23
ATP2C1-210ENST00000505330 STAG3Q9UJ98 1225 aa7.37□□□□□ -1.23
ATP2C1-210ENST00000505330 IRX6P78412 446 aaPredicted RBP7.36□□□□□ -1.23
ATP2C1-210ENST00000505330 TMC1Q8TDI8 760 aa7.36□□□□□ -1.23
ATP2C1-210ENST00000505330 NPM2Q86SE8 214 aaKnown RBP7.35□□□□□ -1.23
ATP2C1-210ENST00000505330 ESF1Q9H501 851 aaKnown RBP7.35□□□□□ -1.23
ATP2C1-210ENST00000505330 RGL3Q3MIN7 710 aa7.35□□□□□ -1.23
ATP2C1-210ENST00000505330 PLEKHD1A6NEE1 506 aa7.35□□□□□ -1.23
ATP2C1-210ENST00000505330 NEFMP07197 916 aa7.34□□□□□ -1.23
ATP2C1-210ENST00000505330 EIF4G2P78344 907 aaKnown RBP eCLIP7.34□□□□□ -1.23
ATP2C1-210ENST00000505330 CUX2O14529 1486 aa7.34□□□□□ -1.23
ATP2C1-210ENST00000505330 CFDP1Q9UEE9 299 aaPredicted RBP7.34□□□□□ -1.23
ATP2C1-210ENST00000505330 CARMIL1Q5VZK9 1371 aa7.33□□□□□ -1.24
ATP2C1-210ENST00000505330 KANK4Q5T7N3 995 aaPredicted RBP7.33□□□□□ -1.24
ATP2C1-210ENST00000505330 ZBTB47Q9UFB7 747 aaPredicted RBP7.33□□□□□ -1.24
ATP2C1-210ENST00000505330 WIZO95785 1651 aa7.31□□□□□ -1.24
ATP2C1-210ENST00000505330 CCNB3Q8WWL7 1395 aa7.3□□□□□ -1.24
ATP2C1-210ENST00000505330 ANP32AP39687 249 aaKnown RBP7.29□□□□□ -1.24
ATP2C1-210ENST00000505330 CCDC136Q96JN2 1154 aa7.28□□□□□ -1.24
ATP2C1-210ENST00000505330 ERCC6Q03468 1493 aa7.28□□□□□ -1.24
ATP2C1-210ENST00000505330 TDRD9Q8NDG6 1382 aaKnown RBP7.28□□□□□ -1.24
ATP2C1-210ENST00000505330 VPS8Q8N3P4 1428 aa7.28□□□□□ -1.24
ATP2C1-210ENST00000505330 WDR43Q15061 677 aaKnown RBP eCLIP7.27□□□□□ -1.25
ATP2C1-210ENST00000505330 EIF4G1Q04637 1599 aaKnown RBP7.27□□□□□ -1.25
ATP2C1-210ENST00000505330 CARD11Q9BXL7 1154 aa7.25□□□□□ -1.25
ATP2C1-210ENST00000505330 FHAD1B1AJZ9 1412 aa7.25□□□□□ -1.25
ATP2C1-210ENST00000505330 FOXD1Q16676 465 aa7.24□□□□□ -1.25
ATP2C1-210ENST00000505330 PLEKHG5O94827 1062 aa7.24□□□□□ -1.25
ATP2C1-210ENST00000505330 RUSC2Q8N2Y8 1516 aa7.24□□□□□ -1.25
ATP2C1-210ENST00000505330 TOP2AP11388 1531 aaKnown RBP7.23□□□□□ -1.25
ATP2C1-210ENST00000505330 SMARCA2P51531 1590 aa7.23□□□□□ -1.25
ATP2C1-210ENST00000505330 SUPT16HQ9Y5B9 1047 aaKnown RBP7.23□□□□□ -1.25
ATP2C1-210ENST00000505330 RAPGEF2Q9Y4G8 1499 aa7.21□□□□□ -1.25
ATP2C1-210ENST00000505330 PPP1R15AO75807 674 aaPredicted RBP7.2□□□□□ -1.26
ATP2C1-210ENST00000505330 ATAD2BQ9ULI0 1458 aa7.2□□□□□ -1.26
ATP2C1-210ENST00000505330 DCAF11Q8TEB1 546 aa7.2□□□□□ -1.26
ATP2C1-210ENST00000505330 SETD5Q9C0A6 1442 aa7.2□□□□□ -1.26
ATP2C1-210ENST00000505330 RAB3GAP2Q9H2M9 1393 aa7.2□□□□□ -1.26
ATP2C1-210ENST00000505330 NBR1Q14596 966 aa7.19□□□□□ -1.26
ATP2C1-210ENST00000505330 NEUROD2Q15784 382 aa7.18□□□□□ -1.26
ATP2C1-210ENST00000505330 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.18□□□□□ -1.26
ATP2C1-210ENST00000505330 KNSTRNQ9Y448 316 aa7.18□□□□□ -1.26
ATP2C1-210ENST00000505330 FHOD3Q2V2M9 1422 aa7.18□□□□□ -1.26
ATP2C1-210ENST00000505330 CADPSQ9ULU8 1353 aa7.18□□□□□ -1.26
ATP2C1-210ENST00000505330 ARHGAP35Q9NRY4 1499 aa7.18□□□□□ -1.26
ATP2C1-210ENST00000505330 TNNT2P45379 298 aaPredicted RBP7.18□□□□□ -1.26
ATP2C1-210ENST00000505330 PPM1GO15355 546 aaPredicted RBP7.18□□□□□ -1.26
ATP2C1-210ENST00000505330 CC2D1BQ5T0F9 858 aaKnown RBP7.18□□□□□ -1.26
ATP2C1-210ENST00000505330 HSP90AA1P07900 732 aaKnown RBP7.17□□□□□ -1.26
ATP2C1-210ENST00000505330 PKD2Q13563 968 aa7.17□□□□□ -1.26
ATP2C1-210ENST00000505330 SMARCA4P51532 1647 aa7.17□□□□□ -1.26
ATP2C1-210ENST00000505330 PDS5BQ9NTI5 1447 aa7.17□□□□□ -1.26
ATP2C1-210ENST00000505330 ARID4BQ4LE39 1312 aaPredicted RBP7.17□□□□□ -1.26
ATP2C1-210ENST00000505330 ZBTB7CA1YPR0 619 aa7.17□□□□□ -1.26
ATP2C1-210ENST00000505330 HSPA5P11021 654 aaKnown RBP7.17□□□□□ -1.26
ATP2C1-210ENST00000505330 C14orf37Q86TY3 774 aa7.16□□□□□ -1.26
ATP2C1-210ENST00000505330 UPF2Q9HAU5 1272 aaKnown RBP7.16□□□□□ -1.26
ATP2C1-210ENST00000505330 ARXQ96QS3 562 aa7.14□□□□□ -1.27
ATP2C1-210ENST00000505330 MPHOSPH9Q99550 1183 aa7.14□□□□□ -1.27
ATP2C1-210ENST00000505330 FMN1Q68DA7 1419 aa7.14□□□□□ -1.27
ATP2C1-210ENST00000505330 MLECQ14165 292 aa7.13□□□□□ -1.27
ATP2C1-210ENST00000505330 CDCA8Q53HL2 280 aa7.13□□□□□ -1.27
ATP2C1-210ENST00000505330 SAFB2Q14151 953 aaKnown RBP eCLIP7.13□□□□□ -1.27
ATP2C1-210ENST00000505330 GGT6Q6P531 493 aa7.13□□□□□ -1.27
ATP2C1-210ENST00000505330 TIMELESSQ9UNS1 1208 aa7.13□□□□□ -1.27
ATP2C1-210ENST00000505330 B4GALNT3Q6L9W6 998 aa7.12□□□□□ -1.27
ATP2C1-210ENST00000505330 POGKQ9P215 609 aa7.12□□□□□ -1.27
ATP2C1-210ENST00000505330 CFAP53Q96M91 514 aa7.11□□□□□ -1.27
ATP2C1-210ENST00000505330 NUP155O75694 1391 aa7.11□□□□□ -1.27
ATP2C1-210ENST00000505330 HNRNPMP52272 730 aaKnown RBP eCLIP7.11□□□□□ -1.275e-7■■■■■ 28.1
ATP2C1-210ENST00000505330 L3MBTL2Q969R5 705 aa7.11□□□□□ -1.27
ATP2C1-210ENST00000505330 CARMIL2Q6F5E8 1435 aa7.1□□□□□ -1.27
ATP2C1-210ENST00000505330 A0A0G2JS52 829 aa7.1□□□□□ -1.27
ATP2C1-210ENST00000505330 LAS1LQ9Y4W2 734 aaKnown RBP7.1□□□□□ -1.27
ATP2C1-210ENST00000505330 TMF1P82094 1093 aa7.1□□□□□ -1.27
ATP2C1-210ENST00000505330 FRAT1Q92837 279 aaPredicted RBP7.1□□□□□ -1.27
ATP2C1-210ENST00000505330 FANCD2Q9BXW9 1451 aa7.09□□□□□ -1.27
ATP2C1-210ENST00000505330 U2SURPO15042 1029 aaKnown RBP7.09□□□□□ -1.27
ATP2C1-210ENST00000505330 JPH4Q96JJ6 628 aa7.09□□□□□ -1.27
ATP2C1-210ENST00000505330 RGS3P49796 1198 aa7.09□□□□□ -1.28
ATP2C1-210ENST00000505330 DHX57Q6P158 1386 aaKnown RBP7.08□□□□□ -1.28
ATP2C1-210ENST00000505330 SOX12O15370 315 aa7.08□□□□□ -1.28
ATP2C1-210ENST00000505330 PPP4R2Q9NY27 417 aa7.08□□□□□ -1.28
ATP2C1-210ENST00000505330 STK26Q9P289 416 aa7.08□□□□□ -1.28
ATP2C1-210ENST00000505330 CCER2I3L3R5 266 aa7.07□□□□□ -1.28
ATP2C1-210ENST00000505330 MYH16Q9H6N6 1097 aa7.07□□□□□ -1.28
ATP2C1-210ENST00000505330 EFCAB2Q5VUJ9 269 aa7.07□□□□□ -1.28
ATP2C1-210ENST00000505330 LMOD2Q6P5Q4 547 aa7.07□□□□□ -1.28
ATP2C1-210ENST00000505330 IGF1RP08069 1367 aa7.07□□□□□ -1.28
ATP2C1-210ENST00000505330 MAPK8IP3Q9UPT6 1336 aa7.07□□□□□ -1.28
ATP2C1-210ENST00000505330 SRPK2P78362 688 aaKnown RBP7.07□□□□□ -1.28
ATP2C1-210ENST00000505330 KANK1Q14678 1352 aa7.06□□□□□ -1.28
ATP2C1-210ENST00000505330 FTSJ3Q8IY81 847 aaKnown RBP7.06□□□□□ -1.28
ATP2C1-210ENST00000505330 RAD54L2Q9Y4B4 1467 aa7.06□□□□□ -1.28
ATP2C1-210ENST00000505330 ANKRD30AQ9BXX3 1397 aa7.06□□□□□ -1.28
ATP2C1-210ENST00000505330 KIF3BO15066 747 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms