RNA–Protein interactions for RNA: ENST00000505330.5

ATP2C1-210, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 4,888 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-210ENST00000505330 SF3B1O75533 1304 aaKnown RBP eCLIP5.48□□□□□ -1.538e-7■■■■■ 85.6
ATP2C1-210ENST00000505330 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.19□□□□□ -1.424e-6■■■■■ 74.1
ATP2C1-210ENST00000505330 FMR1Q06787 632 aaKnown RBP eCLIP5.88□□□□□ -1.472e-20■■■■■ 71.1
ATP2C1-210ENST00000505330 PTBP1P26599 531 aaKnown RBP eCLIP4.86□□□□□ -1.631e-16■■■■■ 67.2
ATP2C1-210ENST00000505330 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.68□□□□□ -1.52e-7■■■■■ 62.8
ATP2C1-210ENST00000505330 CSTF2P33240 577 aaKnown RBP eCLIP5.21□□□□□ -1.584e-21■■■■■ 61.4
ATP2C1-210ENST00000505330 AARSP49588 968 aaKnown RBP eCLIP5.57□□□□□ -1.521e-6■■■■■ 36.1
ATP2C1-210ENST00000505330 PCBP2Q15366 365 aaKnown RBP eCLIP5.29□□□□□ -1.562e-8■■■■■ 33.9
ATP2C1-210ENST00000505330 AQRO60306 1485 aaKnown RBP eCLIP6.99□□□□□ -1.292e-7■■■■■ 33.1
ATP2C1-210ENST00000505330 RBFOX2O43251 390 aaKnown RBP eCLIP4.48□□□□□ -1.692e-8■■■■■ 29.4
ATP2C1-210ENST00000505330 DDX3XO00571 662 aaKnown RBP eCLIP5.66□□□□□ -1.51e-8■■■■■ 28.7
ATP2C1-210ENST00000505330 HNRNPMP52272 730 aaKnown RBP eCLIP7.11□□□□□ -1.275e-7■■■■■ 28.1
ATP2C1-210ENST00000505330 ZRANB2O95218 330 aaKnown RBP eCLIP5.8□□□□□ -1.483e-6■■■■■ 27.8
ATP2C1-210ENST00000505330 RPS3P23396 243 aaKnown RBP eCLIP5.17□□□□□ -1.585e-9■■■■□ 25.6
ATP2C1-210ENST00000505330 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.68□□□□□ -1.664e-7■■■■□ 23.5
ATP2C1-210ENST00000505330 SF3B4Q15427 424 aaKnown RBP eCLIP4.9□□□□□ -1.638e-9■■■■□ 21.6
ATP2C1-210ENST00000505330 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.43□□□□□ -1.381e-6■■■■□ 20.6
ATP2C1-210ENST00000505330 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.77□□□□□ -1.485e-8■■■■□ 20.2
ATP2C1-210ENST00000505330 HNRNPLP14866 589 aaKnown RBP eCLIP5.48□□□□□ -1.534e-6■■■■□ 19.8
ATP2C1-210ENST00000505330 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.07□□□□□ -1.67e-6■■■■□ 19.6
ATP2C1-210ENST00000505330 PPIGQ13427 754 aaKnown RBP eCLIP5.32□□□□□ -1.561e-6■■■□□ 19.2
ATP2C1-210ENST00000505330 U2AF2P26368 475 aaKnown RBP eCLIP6.06□□□□□ -1.445e-6■■■□□ 19.2
ATP2C1-210ENST00000505330 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.29□□□□□ -1.563e-7■■■□□ 18.5
ATP2C1-210ENST00000505330 KHSRPQ92945 711 aaKnown RBP eCLIP5.22□□□□□ -1.572e-6■■■□□ 16.8
ATP2C1-210ENST00000505330 EFTUD2Q15029 972 aaKnown RBP eCLIP5.62□□□□□ -1.514e-9■■■□□ 15.4
ATP2C1-210ENST00000505330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.11□□□□□ -1.431e-6■■■□□ 15.2
ATP2C1-210ENST00000505330 SF3A3Q12874 501 aaKnown RBP eCLIP5.98□□□□□ -1.455e-6■■□□□ 14.3
ATP2C1-210ENST00000505330 GPKOWQ92917 476 aaPredicted RBP eCLIP6.09□□□□□ -1.445e-6■■□□□ 13.8
ATP2C1-210ENST00000505330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.68□□□□□ -1.51e-6■■□□□ 13
ATP2C1-210ENST00000505330 AGGF1Q8N302 714 aaeCLIP5.58□□□□□ -1.522e-9■□□□□ 10.7
ATP2C1-210ENST00000505330 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.12□□□□□ -1.431e-6■□□□□ 10.5
ATP2C1-210ENST00000505330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.3□□□□□ -1.44e-8■□□□□ 8.6
Retrieved 32 of 32 RNA–protein pairs in 7.9 ms