RNA–Protein interactions for RNA: ENST00000494188.1

RAB1A-205, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB1A, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-205ENST00000494188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.59■■□□□ 1.532e-6■■■■■ 96.1
RAB1A-205ENST00000494188 SF3B1O75533 1304 aaKnown RBP eCLIP24.96■■□□□ 1.593e-7■■■■■ 75
RAB1A-205ENST00000494188 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.59■■□□□ 1.693e-15■■■■■ 45.6
RAB1A-205ENST00000494188 TIAL1Q01085 375 aaKnown RBP eCLIP22.23■■□□□ 1.152e-11■■■■■ 40
RAB1A-205ENST00000494188 GTF2F1P35269 517 aaKnown RBP eCLIP24.97■■□□□ 1.598e-9■■■■■ 35.3
RAB1A-205ENST00000494188 FUSP35637 526 aaKnown RBP eCLIP15.26■□□□□ 0.036e-10■■■■■ 31.5
RAB1A-205ENST00000494188 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.84■■□□□ 1.412e-8■■■■■ 30.4
RAB1A-205ENST00000494188 PRPF4O43172 522 aaKnown RBP eCLIP21.83■■□□□ 1.099e-10■■■■■ 29.6
RAB1A-205ENST00000494188 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.81■■□□□ 1.242e-7■■■■■ 27.2
RAB1A-205ENST00000494188 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.89■■□□□ 1.411e-6■■■■■ 26.8
RAB1A-205ENST00000494188 RBM22Q9NW64 420 aaKnown RBP eCLIP23.2■■□□□ 1.31e-10■■■■□ 26.3
RAB1A-205ENST00000494188 ILF3Q12906 894 aaKnown RBP eCLIP22.75■■□□□ 1.234e-7■■■■□ 26.2
RAB1A-205ENST00000494188 PCBP2Q15366 365 aaKnown RBP eCLIP21.8■■□□□ 1.081e-13■■■■□ 25.9
RAB1A-205ENST00000494188 EWSR1Q01844 656 aaKnown RBP eCLIP17.04■□□□□ 0.321e-7■■■■□ 20.5
RAB1A-205ENST00000494188 UPF1Q92900 1129 aaKnown RBP eCLIP31.31■■■□□ 2.62e-32■■■■□ 19.8
RAB1A-205ENST00000494188 PTBP1P26599 531 aaKnown RBP eCLIP17.88■□□□□ 0.452e-7■■■■□ 19.8
RAB1A-205ENST00000494188 U2AF2P26368 475 aaKnown RBP eCLIP25.89■■□□□ 1.748e-7■■■■□ 19.5
RAB1A-205ENST00000494188 TIA1P31483 386 aaKnown RBP eCLIP21.44■■□□□ 1.021e-7■■■■□ 19.4
RAB1A-205ENST00000494188 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.17■□□□□ 0.663e-7■■■■□ 19.3
RAB1A-205ENST00000494188 HNRNPMP52272 730 aaKnown RBP eCLIP35.81■■■■□ 3.324e-7■■■□□ 18.1
RAB1A-205ENST00000494188 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.39■■□□□ 1.013e-8■■■□□ 16.7
RAB1A-205ENST00000494188 AQRO60306 1485 aaKnown RBP eCLIP39.76■■■■□ 3.961e-7■■■□□ 16.7
RAB1A-205ENST00000494188 ZC3H11AO75152 810 aaKnown RBP eCLIP25.18■■□□□ 1.624e-10■■■□□ 16.3
RAB1A-205ENST00000494188 HNRNPLP14866 589 aaKnown RBP eCLIP23.67■■□□□ 1.385e-8■■■□□ 15.6
RAB1A-205ENST00000494188 SUB1P53999 127 aaKnown RBP eCLIP17.54■□□□□ 0.42e-9■■■□□ 15.2
RAB1A-205ENST00000494188 KHSRPQ92945 711 aaKnown RBP eCLIP24.45■■□□□ 1.55e-7■■□□□ 14.5
RAB1A-205ENST00000494188 QKIQ96PU8 341 aaKnown RBP eCLIP23.12■■□□□ 1.292e-7■■□□□ 13.9
RAB1A-205ENST00000494188 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.48■■□□□ 1.513e-9■■□□□ 13.6
RAB1A-205ENST00000494188 FUBP3Q96I24 572 aaKnown RBP eCLIP24.48■■□□□ 1.511e-8■■□□□ 13.2
RAB1A-205ENST00000494188 AKAP1Q92667 903 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■■□□□ 13
RAB1A-205ENST00000494188 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.91■■□□□ 1.269e-7■■□□□ 12.9
RAB1A-205ENST00000494188 RPS3P23396 243 aaKnown RBP eCLIP22.43■■□□□ 1.183e-15■■□□□ 12.5
RAB1A-205ENST00000494188 DDX3XO00571 662 aaKnown RBP eCLIP23.81■■□□□ 1.42e-21■■□□□ 12.4
RAB1A-205ENST00000494188 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.41■□□□□ 0.549e-7■■□□□ 12.4
RAB1A-205ENST00000494188 HNRNPCP07910 306 aaKnown RBP eCLIP17.19■□□□□ 0.343e-6■■□□□ 12.2
RAB1A-205ENST00000494188 NCBP2P52298 156 aaKnown RBP eCLIP21.26■□□□□ 0.997e-18■■□□□ 12.1
RAB1A-205ENST00000494188 PABPC4Q13310 644 aaKnown RBP eCLIP27.29■■□□□ 1.963e-8■■□□□ 11.9
RAB1A-205ENST00000494188 EFTUD2Q15029 972 aaKnown RBP eCLIP22.18■■□□□ 1.141e-9■■□□□ 11.5
RAB1A-205ENST00000494188 SFPQP23246 707 aaKnown RBP eCLIP25.5■■□□□ 1.674e-7■□□□□ 11
RAB1A-205ENST00000494188 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.69■■□□□ 1.864e-6■□□□□ 10.6
RAB1A-205ENST00000494188 SND1Q7KZF4 910 aaKnown RBP eCLIP23.82■■□□□ 1.46e-7■□□□□ 9.7
RAB1A-205ENST00000494188 MATR3P43243 847 aaKnown RBP eCLIP25.17■■□□□ 1.621e-7■□□□□ 9.4
RAB1A-205ENST00000494188 DDX6P26196 483 aaKnown RBP eCLIP24.3■■□□□ 1.484e-15■□□□□ 9.1
Retrieved 43 of 43 RNA–protein pairs in 10.6 ms