RNA–Protein interactions for RNA: ENST00000466756.2

IVD-201, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 3

Gene IVD, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-201ENST00000466756 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
IVD-201ENST00000466756 AEBP2Q6ZN18 517 aaPredicted RBP17.97■□□□□ 0.47
IVD-201ENST00000466756 PHF23Q9BUL5 403 aaPredicted RBP16.02■□□□□ 0.16
IVD-201ENST00000466756 SENP3Q9H4L4 574 aaPredicted RBP15.06■□□□□ 0
IVD-201ENST00000466756 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
IVD-201ENST00000466756 ADRA2BP18089 450 aa14.04□□□□□ -0.16
IVD-201ENST00000466756 FOXD1Q16676 465 aa13.96□□□□□ -0.17
IVD-201ENST00000466756 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
IVD-201ENST00000466756 KCNA4P22459 653 aa13.67□□□□□ -0.22
IVD-201ENST00000466756 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
IVD-201ENST00000466756 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
IVD-201ENST00000466756 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
IVD-201ENST00000466756 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
IVD-201ENST00000466756 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
IVD-201ENST00000466756 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.33
IVD-201ENST00000466756 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
IVD-201ENST00000466756 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
IVD-201ENST00000466756 SCAF1Q9H7N4 1312 aaKnown RBP12.65□□□□□ -0.38
IVD-201ENST00000466756 ZBTB22O15209 634 aa12.61□□□□□ -0.39
IVD-201ENST00000466756 MSH5O43196 834 aa12.57□□□□□ -0.4
IVD-201ENST00000466756 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
IVD-201ENST00000466756 DNAJC5BQ9UF47 199 aa12.4□□□□□ -0.42
IVD-201ENST00000466756 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
IVD-201ENST00000466756 RNF216Q9NWF9 866 aaPredicted RBP12.33□□□□□ -0.44
IVD-201ENST00000466756 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
IVD-201ENST00000466756 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
IVD-201ENST00000466756 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
IVD-201ENST00000466756 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
IVD-201ENST00000466756 ATXN8OSP0DMR3 200 aa11.85□□□□□ -0.51
IVD-201ENST00000466756 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
IVD-201ENST00000466756 FKBP8Q14318 412 aa11.71□□□□□ -0.53
IVD-201ENST00000466756 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
IVD-201ENST00000466756 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
IVD-201ENST00000466756 DCAF8L1A6NGE4 600 aa11.57□□□□□ -0.56
IVD-201ENST00000466756 SLC24A1O60721 1099 aa11.56□□□□□ -0.56
IVD-201ENST00000466756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.56
IVD-201ENST00000466756 U3KPZ7 1027 aaPredicted RBP11.47□□□□□ -0.57
IVD-201ENST00000466756 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
IVD-201ENST00000466756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
IVD-201ENST00000466756 HNRNPUL2Q1KMD3 747 aaKnown RBP11.43□□□□□ -0.58
IVD-201ENST00000466756 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
IVD-201ENST00000466756 APLP2Q06481 763 aa11.16□□□□□ -0.62
IVD-201ENST00000466756 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
IVD-201ENST00000466756 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
IVD-201ENST00000466756 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
IVD-201ENST00000466756 PROM2Q8N271 834 aa11.02□□□□□ -0.65
IVD-201ENST00000466756 SPINK5Q9NQ38 1064 aaPredicted RBP10.98□□□□□ -0.65
IVD-201ENST00000466756 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
IVD-201ENST00000466756 FBLN2P98095 1184 aa10.97□□□□□ -0.65
IVD-201ENST00000466756 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
IVD-201ENST00000466756 POLA2Q14181 598 aa10.93□□□□□ -0.66
IVD-201ENST00000466756 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
IVD-201ENST00000466756 CAPN15O75808 1086 aa10.86□□□□□ -0.67
IVD-201ENST00000466756 IFNLR1Q8IU57 520 aaPredicted RBP10.86□□□□□ -0.67
IVD-201ENST00000466756 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
IVD-201ENST00000466756 ABCB7O75027 752 aa10.74□□□□□ -0.69
IVD-201ENST00000466756 C1QBPQ07021 282 aaKnown RBP10.74□□□□□ -0.69
IVD-201ENST00000466756 PKD2Q13563 968 aa10.74□□□□□ -0.69
IVD-201ENST00000466756 ZBTB12Q9Y330 459 aaPredicted RBP10.73□□□□□ -0.69
IVD-201ENST00000466756 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
IVD-201ENST00000466756 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
IVD-201ENST00000466756 KLHL34Q8N239 644 aa10.6□□□□□ -0.71
IVD-201ENST00000466756 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
IVD-201ENST00000466756 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
IVD-201ENST00000466756 DSG3P32926 999 aa10.56□□□□□ -0.72
IVD-201ENST00000466756 STAG3Q9UJ98 1225 aa10.56□□□□□ -0.72
IVD-201ENST00000466756 ECM2O94769 699 aaPredicted RBP10.54□□□□□ -0.72
IVD-201ENST00000466756 OSCARQ8IYS5 282 aa10.54□□□□□ -0.72
IVD-201ENST00000466756 SSUH2Q9Y2M2 353 aa10.54□□□□□ -0.72
IVD-201ENST00000466756 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
IVD-201ENST00000466756 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
IVD-201ENST00000466756 SPDYE2Q495Y8 402 aa10.52□□□□□ -0.73
IVD-201ENST00000466756 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
IVD-201ENST00000466756 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
IVD-201ENST00000466756 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
IVD-201ENST00000466756 PLCD3Q8N3E9 789 aa10.49□□□□□ -0.73
IVD-201ENST00000466756 BBXQ8WY36 941 aaPredicted RBP10.48□□□□□ -0.73
IVD-201ENST00000466756 MIER1Q8N108 512 aa10.45□□□□□ -0.74
IVD-201ENST00000466756 RGL2O15211 777 aa10.44□□□□□ -0.74
IVD-201ENST00000466756 POTEDQ86YR6 584 aa10.44□□□□□ -0.74
IVD-201ENST00000466756 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.44□□□□□ -0.74
IVD-201ENST00000466756 BCANQ96GW7 911 aa10.43□□□□□ -0.74
IVD-201ENST00000466756 PAXIP1Q6ZW49 1069 aaPredicted RBP10.41□□□□□ -0.74
IVD-201ENST00000466756 KDM2AQ9Y2K7 1162 aa10.4□□□□□ -0.74
IVD-201ENST00000466756 CFAP44Q96MT7 982 aa10.39□□□□□ -0.75
IVD-201ENST00000466756 PRKCSHP14314 528 aaPredicted RBP10.35□□□□□ -0.75
IVD-201ENST00000466756 CIZ1Q9ULV3 898 aaPredicted RBP10.34□□□□□ -0.75
IVD-201ENST00000466756 TAOK2Q9UL54 1235 aa10.32□□□□□ -0.76
IVD-201ENST00000466756 SPRYD3Q8NCJ5 442 aa10.3□□□□□ -0.76
IVD-201ENST00000466756 PLEKHG5O94827 1062 aa10.29□□□□□ -0.76
IVD-201ENST00000466756 TSHZ2Q9NRE2 1034 aa10.29□□□□□ -0.76
IVD-201ENST00000466756 ZBTB47Q9UFB7 747 aaPredicted RBP10.29□□□□□ -0.76
IVD-201ENST00000466756 CHGAP10645 457 aaKnown RBP10.28□□□□□ -0.76
IVD-201ENST00000466756 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
IVD-201ENST00000466756 HS6ST3Q8IZP7 471 aa10.18□□□□□ -0.78
IVD-201ENST00000466756 RNF25Q96BH1 459 aaPredicted RBP10.18□□□□□ -0.78
IVD-201ENST00000466756 TPRNQ4KMQ1 711 aa10.17□□□□□ -0.78
IVD-201ENST00000466756 NUBP1P53384 320 aa10.15□□□□□ -0.78
IVD-201ENST00000466756 GSE1Q14687 1217 aa10.15□□□□□ -0.78
IVD-201ENST00000466756 CACNB1Q02641 598 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms