RNA–Protein interactions for RNA: ENST00000466269.1

CDNF-204, Transcript of cerebral dopamine neurotrophic factor, humanhuman

TSL 3

Gene CDNF, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDNF-204ENST00000466269 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
CDNF-204ENST00000466269 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
CDNF-204ENST00000466269 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
CDNF-204ENST00000466269 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
CDNF-204ENST00000466269 SENP3Q9H4L4 574 aaPredicted RBP15.17■□□□□ 0.02
CDNF-204ENST00000466269 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
CDNF-204ENST00000466269 KCNA4P22459 653 aa14.47□□□□□ -0.09
CDNF-204ENST00000466269 ADRA2BP18089 450 aa14.4□□□□□ -0.1
CDNF-204ENST00000466269 FOXD1Q16676 465 aa14.19□□□□□ -0.14
CDNF-204ENST00000466269 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
CDNF-204ENST00000466269 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
CDNF-204ENST00000466269 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
CDNF-204ENST00000466269 PPP4R3CPQ6ZMV5 832 aa13.67□□□□□ -0.22
CDNF-204ENST00000466269 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
CDNF-204ENST00000466269 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
CDNF-204ENST00000466269 DNAJC5Q9H3Z4 198 aa13.55□□□□□ -0.24
CDNF-204ENST00000466269 SLC24A1O60721 1099 aa13.52□□□□□ -0.25
CDNF-204ENST00000466269 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
CDNF-204ENST00000466269 ZBTB22O15209 634 aa13.35□□□□□ -0.27
CDNF-204ENST00000466269 MSH5O43196 834 aa13.29□□□□□ -0.28
CDNF-204ENST00000466269 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
CDNF-204ENST00000466269 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
CDNF-204ENST00000466269 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
CDNF-204ENST00000466269 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
CDNF-204ENST00000466269 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
CDNF-204ENST00000466269 FOXD4L1Q9NU39 408 aa13.01□□□□□ -0.33
CDNF-204ENST00000466269 ABCC9O60706 1549 aa12.91□□□□□ -0.34
CDNF-204ENST00000466269 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
CDNF-204ENST00000466269 FKBP8Q14318 412 aa12.63□□□□□ -0.39
CDNF-204ENST00000466269 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
CDNF-204ENST00000466269 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
CDNF-204ENST00000466269 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
CDNF-204ENST00000466269 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
CDNF-204ENST00000466269 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
CDNF-204ENST00000466269 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
CDNF-204ENST00000466269 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
CDNF-204ENST00000466269 PLCB2Q00722 1185 aa12.14□□□□□ -0.47
CDNF-204ENST00000466269 DMRT2Q9Y5R5 561 aa12.13□□□□□ -0.47
CDNF-204ENST00000466269 NISCHQ9Y2I1 1504 aa12.05□□□□□ -0.48
CDNF-204ENST00000466269 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
CDNF-204ENST00000466269 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
CDNF-204ENST00000466269 PRKCSHP14314 528 aaPredicted RBP11.96□□□□□ -0.49
CDNF-204ENST00000466269 BCANQ96GW7 911 aa11.96□□□□□ -0.49
CDNF-204ENST00000466269 ILDR1Q86SU0 546 aaPredicted RBP11.93□□□□□ -0.5
CDNF-204ENST00000466269 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
CDNF-204ENST00000466269 TAOK2Q9UL54 1235 aa11.88□□□□□ -0.51
CDNF-204ENST00000466269 DCAF8L2P0C7V8 631 aa11.8□□□□□ -0.52
CDNF-204ENST00000466269 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDNF-204ENST00000466269 VSIG10Q8N0Z9 540 aa11.8□□□□□ -0.52
CDNF-204ENST00000466269 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
CDNF-204ENST00000466269 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
CDNF-204ENST00000466269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
CDNF-204ENST00000466269 HNRNPUL2Q1KMD3 747 aaKnown RBP11.75□□□□□ -0.53
CDNF-204ENST00000466269 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
CDNF-204ENST00000466269 CUX2O14529 1486 aa11.71□□□□□ -0.53
CDNF-204ENST00000466269 SPDYE4A6NLX3 237 aa11.69□□□□□ -0.54
CDNF-204ENST00000466269 TPRNQ4KMQ1 711 aa11.69□□□□□ -0.54
CDNF-204ENST00000466269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDNF-204ENST00000466269 IFNLR1Q8IU57 520 aaPredicted RBP11.65□□□□□ -0.54
CDNF-204ENST00000466269 PKD2Q13563 968 aa11.64□□□□□ -0.55
CDNF-204ENST00000466269 PROM2Q8N271 834 aa11.64□□□□□ -0.55
CDNF-204ENST00000466269 ZNF219Q9P2Y4 722 aaPredicted RBP11.64□□□□□ -0.55
CDNF-204ENST00000466269 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
CDNF-204ENST00000466269 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
CDNF-204ENST00000466269 DCAF8L1A6NGE4 600 aa11.57□□□□□ -0.56
CDNF-204ENST00000466269 FBLN2P98095 1184 aa11.54□□□□□ -0.56
CDNF-204ENST00000466269 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
CDNF-204ENST00000466269 BBXQ8WY36 941 aaPredicted RBP11.53□□□□□ -0.56
CDNF-204ENST00000466269 CC2D2AQ9P2K1 1620 aa11.52□□□□□ -0.57
CDNF-204ENST00000466269 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
CDNF-204ENST00000466269 PAXIP1Q6ZW49 1069 aaPredicted RBP11.49□□□□□ -0.57
CDNF-204ENST00000466269 RB1CC1Q8TDY2 1594 aa11.49□□□□□ -0.57
CDNF-204ENST00000466269 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
CDNF-204ENST00000466269 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
CDNF-204ENST00000466269 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDNF-204ENST00000466269 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
CDNF-204ENST00000466269 APLP2Q06481 763 aa11.38□□□□□ -0.59
CDNF-204ENST00000466269 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
CDNF-204ENST00000466269 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
CDNF-204ENST00000466269 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
CDNF-204ENST00000466269 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
CDNF-204ENST00000466269 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
CDNF-204ENST00000466269 BICRAQ9NZM4 1560 aa11.31□□□□□ -0.6
CDNF-204ENST00000466269 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
CDNF-204ENST00000466269 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
CDNF-204ENST00000466269 RGL2O15211 777 aa11.26□□□□□ -0.61
CDNF-204ENST00000466269 CCDC180Q9P1Z9 1646 aa11.23□□□□□ -0.61
CDNF-204ENST00000466269 NBR1Q14596 966 aa11.22□□□□□ -0.61
CDNF-204ENST00000466269 ERCC6Q03468 1493 aa11.2□□□□□ -0.62
CDNF-204ENST00000466269 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
CDNF-204ENST00000466269 C1QBPQ07021 282 aaKnown RBP11.16□□□□□ -0.62
CDNF-204ENST00000466269 SOCS7O14512 581 aa11.15□□□□□ -0.62
CDNF-204ENST00000466269 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
CDNF-204ENST00000466269 ARXQ96QS3 562 aa11.15□□□□□ -0.62
CDNF-204ENST00000466269 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.63
CDNF-204ENST00000466269 POLA2Q14181 598 aa11.14□□□□□ -0.63
CDNF-204ENST00000466269 DAXXQ9UER7 740 aaPredicted RBP11.14□□□□□ -0.63
CDNF-204ENST00000466269 LMTK3Q96Q04 1460 aa11.13□□□□□ -0.63
CDNF-204ENST00000466269 EIF4G1Q04637 1599 aaKnown RBP11.13□□□□□ -0.63
CDNF-204ENST00000466269 CHGAP10645 457 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms