RNA–Protein interactions for RNA: ENST00000463563.6

U2SURP-203, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 2

Gene U2SURP, Length 4,364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-203ENST00000463563 CHIC1Q5VXU3 224 aa7.18□□□□□ -1.26
U2SURP-203ENST00000463563 AEBP2Q6ZN18 517 aaPredicted RBP6.96□□□□□ -1.3
U2SURP-203ENST00000463563 PHF23Q9BUL5 403 aaPredicted RBP6.48□□□□□ -1.37
U2SURP-203ENST00000463563 EHMT2Q96KQ7 1210 aa6.09□□□□□ -1.43
U2SURP-203ENST00000463563 PLPPR3Q6T4P5 718 aa5.99□□□□□ -1.45
U2SURP-203ENST00000463563 SLC24A1O60721 1099 aa5.95□□□□□ -1.46
U2SURP-203ENST00000463563 KCNA4P22459 653 aa5.9□□□□□ -1.46
U2SURP-203ENST00000463563 CSRNP3Q8WYN3 585 aa5.84□□□□□ -1.47
U2SURP-203ENST00000463563 ADRA2BP18089 450 aa5.75□□□□□ -1.49
U2SURP-203ENST00000463563 RTN4Q9NQC3 1192 aaKnown RBP5.69□□□□□ -1.5
U2SURP-203ENST00000463563 SENP3Q9H4L4 574 aaPredicted RBP5.65□□□□□ -1.51
U2SURP-203ENST00000463563 SLC4A1APQ9BWU0 796 aaKnown RBP5.62□□□□□ -1.51
U2SURP-203ENST00000463563 PPP6R1Q9UPN7 881 aa5.55□□□□□ -1.52
U2SURP-203ENST00000463563 AMER1Q5JTC6 1135 aaPredicted RBP5.55□□□□□ -1.52
U2SURP-203ENST00000463563 ZBTB22O15209 634 aa5.52□□□□□ -1.53
U2SURP-203ENST00000463563 PPP4R3CPQ6ZMV5 832 aa5.39□□□□□ -1.55
U2SURP-203ENST00000463563 NPM3O75607 178 aaKnown RBP5.36□□□□□ -1.55
U2SURP-203ENST00000463563 NCBP3Q53F19 620 aaKnown RBP5.34□□□□□ -1.55
U2SURP-203ENST00000463563 FOXD1Q16676 465 aa5.29□□□□□ -1.56
U2SURP-203ENST00000463563 PRKCSHP14314 528 aaPredicted RBP5.27□□□□□ -1.57
U2SURP-203ENST00000463563 POTEDQ86YR6 584 aa5.25□□□□□ -1.57
U2SURP-203ENST00000463563 FOXD4L1Q9NU39 408 aa5.2□□□□□ -1.58
U2SURP-203ENST00000463563 FKBP8Q14318 412 aa5.18□□□□□ -1.58
U2SURP-203ENST00000463563 PLCB2Q00722 1185 aa5.15□□□□□ -1.59
U2SURP-203ENST00000463563 TAOK2Q9UL54 1235 aa5.14□□□□□ -1.59
U2SURP-203ENST00000463563 DNAJC5BQ9UF47 199 aa5.1□□□□□ -1.59
U2SURP-203ENST00000463563 CNKSR2Q8WXI2 1034 aa5.09□□□□□ -1.59
U2SURP-203ENST00000463563 BCANQ96GW7 911 aa5.08□□□□□ -1.6
U2SURP-203ENST00000463563 DAXXQ9UER7 740 aaPredicted RBP5.08□□□□□ -1.6
U2SURP-203ENST00000463563 TIMELESSQ9UNS1 1208 aa5.05□□□□□ -1.6
U2SURP-203ENST00000463563 PIAS4Q8N2W9 510 aaPredicted RBP5.04□□□□□ -1.6
U2SURP-203ENST00000463563 HAP1P54257 671 aaPredicted RBP5.03□□□□□ -1.6
U2SURP-203ENST00000463563 TPRNQ4KMQ1 711 aa5.03□□□□□ -1.6
U2SURP-203ENST00000463563 SLC4A2P04920 1241 aa4.98□□□□□ -1.61
U2SURP-203ENST00000463563 KDM2AQ9Y2K7 1162 aa4.98□□□□□ -1.61
U2SURP-203ENST00000463563 VSIG10Q8N0Z9 540 aa4.97□□□□□ -1.61
U2SURP-203ENST00000463563 TULP1O00294 542 aaPredicted RBP4.96□□□□□ -1.62
U2SURP-203ENST00000463563 ARXQ96QS3 562 aa4.95□□□□□ -1.62
U2SURP-203ENST00000463563 ATXN8OSP0DMR3 200 aa4.94□□□□□ -1.62
U2SURP-203ENST00000463563 FBLN2P98095 1184 aa4.93□□□□□ -1.62
U2SURP-203ENST00000463563 MAPK8IP2Q13387 824 aaPredicted RBP4.9□□□□□ -1.63
U2SURP-203ENST00000463563 RNF216Q9NWF9 866 aaPredicted RBP4.88□□□□□ -1.63
U2SURP-203ENST00000463563 GTF3C3Q9Y5Q9 886 aa4.87□□□□□ -1.63
U2SURP-203ENST00000463563 SCAF1Q9H7N4 1312 aaKnown RBP4.86□□□□□ -1.63
U2SURP-203ENST00000463563 RANGAP1P46060 587 aaPredicted RBP4.86□□□□□ -1.63
U2SURP-203ENST00000463563 PKD2Q13563 968 aa4.86□□□□□ -1.63
U2SURP-203ENST00000463563 MYCNP04198 464 aaPredicted RBP4.85□□□□□ -1.63
U2SURP-203ENST00000463563 ATF5Q9Y2D1 282 aaPredicted RBP4.85□□□□□ -1.63
U2SURP-203ENST00000463563 NPM1P06748 294 aaKnown RBP eCLIP4.82□□□□□ -1.64
U2SURP-203ENST00000463563 DCAF8L2P0C7V8 631 aa4.81□□□□□ -1.64
U2SURP-203ENST00000463563 IFNLR1Q8IU57 520 aaPredicted RBP4.81□□□□□ -1.64
U2SURP-203ENST00000463563 HOMEZQ8IX15 550 aa4.79□□□□□ -1.64
U2SURP-203ENST00000463563 TMEM132AQ24JP5 1023 aa4.79□□□□□ -1.64
U2SURP-203ENST00000463563 TSHZ2Q9NRE2 1034 aa4.77□□□□□ -1.65
U2SURP-203ENST00000463563 PAXIP1Q6ZW49 1069 aaPredicted RBP4.76□□□□□ -1.65
U2SURP-203ENST00000463563 BBXQ8WY36 941 aaPredicted RBP4.76□□□□□ -1.65
U2SURP-203ENST00000463563 VASPP50552 380 aaPredicted RBP4.76□□□□□ -1.65
U2SURP-203ENST00000463563 HOXD11P31277 338 aaPredicted RBP4.76□□□□□ -1.65
U2SURP-203ENST00000463563 PROM2Q8N271 834 aa4.75□□□□□ -1.65
U2SURP-203ENST00000463563 FBXO3Q9UK99 471 aa4.74□□□□□ -1.65
U2SURP-203ENST00000463563 CFAP44Q96MT7 982 aa4.74□□□□□ -1.65
U2SURP-203ENST00000463563 DNAJC5Q9H3Z4 198 aa4.74□□□□□ -1.65
U2SURP-203ENST00000463563 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.71□□□□□ -1.66
U2SURP-203ENST00000463563 PELP1Q8IZL8 1130 aaKnown RBP4.7□□□□□ -1.66
U2SURP-203ENST00000463563 PODXL2Q9NZ53 605 aa4.7□□□□□ -1.66
U2SURP-203ENST00000463563 ERICH6Q7L0X2 663 aa4.69□□□□□ -1.66
U2SURP-203ENST00000463563 C14orf37Q86TY3 774 aa4.68□□□□□ -1.66
U2SURP-203ENST00000463563 SPDYE4A6NLX3 237 aa4.67□□□□□ -1.66
U2SURP-203ENST00000463563 SPRYD3Q8NCJ5 442 aa4.66□□□□□ -1.66
U2SURP-203ENST00000463563 RGL2O15211 777 aa4.65□□□□□ -1.66
U2SURP-203ENST00000463563 TTBK1Q5TCY1 1321 aaPredicted RBP4.65□□□□□ -1.67
U2SURP-203ENST00000463563 NBR1Q14596 966 aa4.65□□□□□ -1.67
U2SURP-203ENST00000463563 MKRN4PQ13434 485 aaPredicted RBP4.64□□□□□ -1.67
U2SURP-203ENST00000463563 DMRT2Q9Y5R5 561 aa4.64□□□□□ -1.67
U2SURP-203ENST00000463563 MYT1Q01538 1121 aa4.63□□□□□ -1.67
U2SURP-203ENST00000463563 ECM2O94769 699 aaPredicted RBP4.62□□□□□ -1.67
U2SURP-203ENST00000463563 SUPT5HO00267 1087 aaKnown RBP4.61□□□□□ -1.67
U2SURP-203ENST00000463563 KLHL34Q8N239 644 aa4.6□□□□□ -1.67
U2SURP-203ENST00000463563 UBTFP17480 764 aaKnown RBP4.58□□□□□ -1.68
U2SURP-203ENST00000463563 ZNF219Q9P2Y4 722 aaPredicted RBP4.58□□□□□ -1.68
U2SURP-203ENST00000463563 TRIM26Q12899 539 aaPredicted RBP4.58□□□□□ -1.68
U2SURP-203ENST00000463563 APLP2Q06481 763 aa4.57□□□□□ -1.68
U2SURP-203ENST00000463563 HRCP23327 699 aa4.57□□□□□ -1.68
U2SURP-203ENST00000463563 NPM2Q86SE8 214 aaKnown RBP4.57□□□□□ -1.68
U2SURP-203ENST00000463563 TRHP20396 242 aaPredicted RBP4.56□□□□□ -1.68
U2SURP-203ENST00000463563 SPOCK2Q92563 424 aa4.55□□□□□ -1.68
U2SURP-203ENST00000463563 MSH5O43196 834 aa4.54□□□□□ -1.68
U2SURP-203ENST00000463563 U3KPZ7 1027 aaPredicted RBP4.54□□□□□ -1.68
U2SURP-203ENST00000463563 CHGAP10645 457 aaKnown RBP4.54□□□□□ -1.68
U2SURP-203ENST00000463563 BRPF1P55201 1214 aaPredicted RBP4.54□□□□□ -1.68
U2SURP-203ENST00000463563 SAMD1Q6SPF0 538 aaPredicted RBP4.53□□□□□ -1.68
U2SURP-203ENST00000463563 NKX1-1Q15270 411 aaPredicted RBP4.51□□□□□ -1.69
U2SURP-203ENST00000463563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.49□□□□□ -1.69
U2SURP-203ENST00000463563 HNRNPUL2Q1KMD3 747 aaKnown RBP4.49□□□□□ -1.69
U2SURP-203ENST00000463563 HS6ST3Q8IZP7 471 aa4.49□□□□□ -1.69
U2SURP-203ENST00000463563 GTPBP6O43824 516 aaPredicted RBP4.47□□□□□ -1.69
U2SURP-203ENST00000463563 EIF5BO60841 1220 aaKnown RBP4.47□□□□□ -1.69
U2SURP-203ENST00000463563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.46□□□□□ -1.69
U2SURP-203ENST00000463563 RNF25Q96BH1 459 aaPredicted RBP4.46□□□□□ -1.69
U2SURP-203ENST00000463563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.44□□□□□ -1.73e-7■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms