RNA–Protein interactions for RNA: ENST00000461623.1

ABCA9-204, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5

Gene ABCA9, Length 2,172 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-204ENST00000461623 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
ABCA9-204ENST00000461623 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.75
ABCA9-204ENST00000461623 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
ABCA9-204ENST00000461623 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
ABCA9-204ENST00000461623 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
ABCA9-204ENST00000461623 KCNA4P22459 653 aa16.61■□□□□ 0.25
ABCA9-204ENST00000461623 SLC24A1O60721 1099 aa16.45■□□□□ 0.22
ABCA9-204ENST00000461623 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
ABCA9-204ENST00000461623 CSRNP3Q8WYN3 585 aa16.33■□□□□ 0.2
ABCA9-204ENST00000461623 ADRA2BP18089 450 aa16.21■□□□□ 0.19
ABCA9-204ENST00000461623 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
ABCA9-204ENST00000461623 RTN4Q9NQC3 1192 aaKnown RBP15.79■□□□□ 0.12
ABCA9-204ENST00000461623 PPP6R1Q9UPN7 881 aa15.7■□□□□ 0.1
ABCA9-204ENST00000461623 AMER1Q5JTC6 1135 aaPredicted RBP15.63■□□□□ 0.09
ABCA9-204ENST00000461623 ZBTB22O15209 634 aa15.38■□□□□ 0.05
ABCA9-204ENST00000461623 PPP4R3CPQ6ZMV5 832 aa15.35■□□□□ 0.05
ABCA9-204ENST00000461623 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
ABCA9-204ENST00000461623 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
ABCA9-204ENST00000461623 FOXD1Q16676 465 aa15.15■□□□□ 0.02
ABCA9-204ENST00000461623 NISCHQ9Y2I1 1504 aa14.95□□□□□ -0.02
ABCA9-204ENST00000461623 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
ABCA9-204ENST00000461623 FKBP8Q14318 412 aa14.64□□□□□ -0.07
ABCA9-204ENST00000461623 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
ABCA9-204ENST00000461623 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
ABCA9-204ENST00000461623 PRKCSHP14314 528 aaPredicted RBP14.49□□□□□ -0.09
ABCA9-204ENST00000461623 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
ABCA9-204ENST00000461623 PLCB2Q00722 1185 aa14.4□□□□□ -0.1
ABCA9-204ENST00000461623 BCANQ96GW7 911 aa14.29□□□□□ -0.12
ABCA9-204ENST00000461623 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
ABCA9-204ENST00000461623 HAP1P54257 671 aaPredicted RBP14.18□□□□□ -0.14
ABCA9-204ENST00000461623 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
ABCA9-204ENST00000461623 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
ABCA9-204ENST00000461623 TPRNQ4KMQ1 711 aa14.03□□□□□ -0.16
ABCA9-204ENST00000461623 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
ABCA9-204ENST00000461623 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
ABCA9-204ENST00000461623 DAXXQ9UER7 740 aaPredicted RBP13.97□□□□□ -0.17
ABCA9-204ENST00000461623 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.18
ABCA9-204ENST00000461623 MAPK8IP2Q13387 824 aaPredicted RBP13.9□□□□□ -0.18
ABCA9-204ENST00000461623 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
ABCA9-204ENST00000461623 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
ABCA9-204ENST00000461623 DCAF8L2P0C7V8 631 aa13.78□□□□□ -0.2
ABCA9-204ENST00000461623 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
ABCA9-204ENST00000461623 TULP1O00294 542 aaPredicted RBP13.73□□□□□ -0.21
ABCA9-204ENST00000461623 ARXQ96QS3 562 aa13.73□□□□□ -0.21
ABCA9-204ENST00000461623 FBLN2P98095 1184 aa13.68□□□□□ -0.22
ABCA9-204ENST00000461623 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
ABCA9-204ENST00000461623 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
ABCA9-204ENST00000461623 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
ABCA9-204ENST00000461623 PKD2Q13563 968 aa13.55□□□□□ -0.24
ABCA9-204ENST00000461623 GTF3C3Q9Y5Q9 886 aa13.54□□□□□ -0.24
ABCA9-204ENST00000461623 VASPP50552 380 aaPredicted RBP13.5□□□□□ -0.25
ABCA9-204ENST00000461623 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
ABCA9-204ENST00000461623 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.46□□□□□ -0.25
ABCA9-204ENST00000461623 PAXIP1Q6ZW49 1069 aaPredicted RBP13.45□□□□□ -0.26
ABCA9-204ENST00000461623 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
ABCA9-204ENST00000461623 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
ABCA9-204ENST00000461623 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
ABCA9-204ENST00000461623 HOMEZQ8IX15 550 aa13.37□□□□□ -0.27
ABCA9-204ENST00000461623 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
ABCA9-204ENST00000461623 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
ABCA9-204ENST00000461623 DMRT2Q9Y5R5 561 aa13.33□□□□□ -0.28
ABCA9-204ENST00000461623 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
ABCA9-204ENST00000461623 MSH5O43196 834 aa13.3□□□□□ -0.28
ABCA9-204ENST00000461623 PROM2Q8N271 834 aa13.3□□□□□ -0.28
ABCA9-204ENST00000461623 TMEM132AQ24JP5 1023 aa13.27□□□□□ -0.28
ABCA9-204ENST00000461623 NBR1Q14596 966 aa13.24□□□□□ -0.29
ABCA9-204ENST00000461623 SPRYD3Q8NCJ5 442 aa13.21□□□□□ -0.3
ABCA9-204ENST00000461623 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
ABCA9-204ENST00000461623 DNAJC5Q9H3Z4 198 aa13.14□□□□□ -0.31
ABCA9-204ENST00000461623 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
ABCA9-204ENST00000461623 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
ABCA9-204ENST00000461623 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
ABCA9-204ENST00000461623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
ABCA9-204ENST00000461623 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
ABCA9-204ENST00000461623 RGL2O15211 777 aa13.05□□□□□ -0.32
ABCA9-204ENST00000461623 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
ABCA9-204ENST00000461623 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
ABCA9-204ENST00000461623 POTEDQ86YR6 584 aa12.96□□□□□ -0.34
ABCA9-204ENST00000461623 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
ABCA9-204ENST00000461623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
ABCA9-204ENST00000461623 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
ABCA9-204ENST00000461623 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
ABCA9-204ENST00000461623 CCDC180Q9P1Z9 1646 aa12.9□□□□□ -0.34
ABCA9-204ENST00000461623 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
ABCA9-204ENST00000461623 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
ABCA9-204ENST00000461623 SUPT5HO00267 1087 aaKnown RBP12.82□□□□□ -0.36
ABCA9-204ENST00000461623 DCAF8L1A6NGE4 600 aa12.69□□□□□ -0.38
ABCA9-204ENST00000461623 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
ABCA9-204ENST00000461623 ZCCHC6Q5VYS8 1495 aaKnown RBP12.66□□□□□ -0.38
ABCA9-204ENST00000461623 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
ABCA9-204ENST00000461623 UBTFP17480 764 aaKnown RBP12.62□□□□□ -0.39
ABCA9-204ENST00000461623 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
ABCA9-204ENST00000461623 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
ABCA9-204ENST00000461623 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
ABCA9-204ENST00000461623 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
ABCA9-204ENST00000461623 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
ABCA9-204ENST00000461623 APLP2Q06481 763 aa12.54□□□□□ -0.4
ABCA9-204ENST00000461623 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
ABCA9-204ENST00000461623 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
ABCA9-204ENST00000461623 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms