RNA–Protein interactions for RNA: ENST00000458028.1

LINC01013-205, Transcript of long intergenic non-protein coding RNA 1013, humanhuman

TSL 1 (best) BASIC

Gene LINC01013, Length 1,345 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01013-205ENST00000458028 CHIC1Q5VXU3 224 aa27.33■■□□□ 1.97
LINC01013-205ENST00000458028 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
LINC01013-205ENST00000458028 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
LINC01013-205ENST00000458028 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
LINC01013-205ENST00000458028 PLPPR3Q6T4P5 718 aa22.8■■□□□ 1.24
LINC01013-205ENST00000458028 FOXD1Q16676 465 aa21.62■■□□□ 1.05
LINC01013-205ENST00000458028 ADRA2BP18089 450 aa21.12■□□□□ 0.97
LINC01013-205ENST00000458028 KCNA4P22459 653 aa20.96■□□□□ 0.95
LINC01013-205ENST00000458028 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
LINC01013-205ENST00000458028 PPP6R1Q9UPN7 881 aa20.83■□□□□ 0.93
LINC01013-205ENST00000458028 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.83
LINC01013-205ENST00000458028 PPP4R3CPQ6ZMV5 832 aa20.18■□□□□ 0.82
LINC01013-205ENST00000458028 PIAS4Q8N2W9 510 aaPredicted RBP20.16■□□□□ 0.82
LINC01013-205ENST00000458028 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
LINC01013-205ENST00000458028 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
LINC01013-205ENST00000458028 MSH5O43196 834 aa20■□□□□ 0.79
LINC01013-205ENST00000458028 NPM3O75607 178 aaKnown RBP19.66■□□□□ 0.74
LINC01013-205ENST00000458028 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
LINC01013-205ENST00000458028 CNKSR2Q8WXI2 1034 aa19.4■□□□□ 0.7
LINC01013-205ENST00000458028 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
LINC01013-205ENST00000458028 ZBTB22O15209 634 aa19.23■□□□□ 0.67
LINC01013-205ENST00000458028 FOXD4L1Q9NU39 408 aa19.05■□□□□ 0.64
LINC01013-205ENST00000458028 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
LINC01013-205ENST00000458028 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
LINC01013-205ENST00000458028 AMER1Q5JTC6 1135 aaPredicted RBP18.74■□□□□ 0.59
LINC01013-205ENST00000458028 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
LINC01013-205ENST00000458028 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
LINC01013-205ENST00000458028 RTN4Q9NQC3 1192 aaKnown RBP18.56■□□□□ 0.56
LINC01013-205ENST00000458028 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
LINC01013-205ENST00000458028 ATXN8OSP0DMR3 200 aa18.34■□□□□ 0.53
LINC01013-205ENST00000458028 HOXD11P31277 338 aaPredicted RBP18.3■□□□□ 0.52
LINC01013-205ENST00000458028 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
LINC01013-205ENST00000458028 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
LINC01013-205ENST00000458028 FKBP8Q14318 412 aa18.21■□□□□ 0.51
LINC01013-205ENST00000458028 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
LINC01013-205ENST00000458028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
LINC01013-205ENST00000458028 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
LINC01013-205ENST00000458028 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
LINC01013-205ENST00000458028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
LINC01013-205ENST00000458028 ATF5Q9Y2D1 282 aaPredicted RBP17.48■□□□□ 0.39
LINC01013-205ENST00000458028 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
LINC01013-205ENST00000458028 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
LINC01013-205ENST00000458028 APLP2Q06481 763 aa17.22■□□□□ 0.35
LINC01013-205ENST00000458028 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
LINC01013-205ENST00000458028 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
LINC01013-205ENST00000458028 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
LINC01013-205ENST00000458028 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
LINC01013-205ENST00000458028 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
LINC01013-205ENST00000458028 VASPP50552 380 aaPredicted RBP16.98■□□□□ 0.31
LINC01013-205ENST00000458028 HAP1P54257 671 aaPredicted RBP16.96■□□□□ 0.3
LINC01013-205ENST00000458028 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
LINC01013-205ENST00000458028 PROM2Q8N271 834 aa16.93■□□□□ 0.3
LINC01013-205ENST00000458028 FBLN2P98095 1184 aa16.9■□□□□ 0.3
LINC01013-205ENST00000458028 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
LINC01013-205ENST00000458028 BCANQ96GW7 911 aa16.86■□□□□ 0.29
LINC01013-205ENST00000458028 MKRN4PQ13434 485 aaPredicted RBP16.8■□□□□ 0.28
LINC01013-205ENST00000458028 IFNLR1Q8IU57 520 aaPredicted RBP16.79■□□□□ 0.28
LINC01013-205ENST00000458028 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
LINC01013-205ENST00000458028 PKD2Q13563 968 aa16.67■□□□□ 0.26
LINC01013-205ENST00000458028 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
LINC01013-205ENST00000458028 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
LINC01013-205ENST00000458028 POLA2Q14181 598 aa16.56■□□□□ 0.24
LINC01013-205ENST00000458028 TAOK2Q9UL54 1235 aa16.55■□□□□ 0.24
LINC01013-205ENST00000458028 BBXQ8WY36 941 aaPredicted RBP16.54■□□□□ 0.24
LINC01013-205ENST00000458028 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
LINC01013-205ENST00000458028 SPOCK2Q92563 424 aa16.5■□□□□ 0.23
LINC01013-205ENST00000458028 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
LINC01013-205ENST00000458028 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
LINC01013-205ENST00000458028 PRKCSHP14314 528 aaPredicted RBP16.45■□□□□ 0.22
LINC01013-205ENST00000458028 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
LINC01013-205ENST00000458028 PAXIP1Q6ZW49 1069 aaPredicted RBP16.4■□□□□ 0.22
LINC01013-205ENST00000458028 CAPN15O75808 1086 aa16.39■□□□□ 0.21
LINC01013-205ENST00000458028 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
LINC01013-205ENST00000458028 CFAP44Q96MT7 982 aa16.36■□□□□ 0.21
LINC01013-205ENST00000458028 KDM2AQ9Y2K7 1162 aa16.32■□□□□ 0.2
LINC01013-205ENST00000458028 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
LINC01013-205ENST00000458028 SPRYD3Q8NCJ5 442 aa16.27■□□□□ 0.2
LINC01013-205ENST00000458028 PLCD3Q8N3E9 789 aa16.26■□□□□ 0.19
LINC01013-205ENST00000458028 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC01013-205ENST00000458028 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
LINC01013-205ENST00000458028 RGL2O15211 777 aa16.17■□□□□ 0.18
LINC01013-205ENST00000458028 DSG3P32926 999 aa16.17■□□□□ 0.18
LINC01013-205ENST00000458028 MIER1Q8N108 512 aa16.14■□□□□ 0.17
LINC01013-205ENST00000458028 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
LINC01013-205ENST00000458028 ABCB7O75027 752 aa16.1■□□□□ 0.17
LINC01013-205ENST00000458028 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
LINC01013-205ENST00000458028 SPDYE2BA6NHP3 402 aa16.08■□□□□ 0.16
LINC01013-205ENST00000458028 SPDYE6P0CI01 402 aa16.08■□□□□ 0.16
LINC01013-205ENST00000458028 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.16
LINC01013-205ENST00000458028 TSHZ2Q9NRE2 1034 aa16.08■□□□□ 0.16
LINC01013-205ENST00000458028 CHGAP10645 457 aaKnown RBP16.05■□□□□ 0.16
LINC01013-205ENST00000458028 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
LINC01013-205ENST00000458028 TRIM41Q8WV44 630 aa16.02■□□□□ 0.16
LINC01013-205ENST00000458028 NBR1Q14596 966 aa16.01■□□□□ 0.15
LINC01013-205ENST00000458028 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
LINC01013-205ENST00000458028 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC01013-205ENST00000458028 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
LINC01013-205ENST00000458028 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
LINC01013-205ENST00000458028 HS6ST3Q8IZP7 471 aa15.87■□□□□ 0.13
LINC01013-205ENST00000458028 GSE1Q14687 1217 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms