RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
RAB28P3-201ENST00000448325 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
RAB28P3-201ENST00000448325 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
RAB28P3-201ENST00000448325 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
RAB28P3-201ENST00000448325 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
RAB28P3-201ENST00000448325 FOXD1Q16676 465 aa17.4■□□□□ 0.38
RAB28P3-201ENST00000448325 MSH5O43196 834 aa16.8■□□□□ 0.28
RAB28P3-201ENST00000448325 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
RAB28P3-201ENST00000448325 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
RAB28P3-201ENST00000448325 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
RAB28P3-201ENST00000448325 ADRA2BP18089 450 aa15.35■□□□□ 0.05
RAB28P3-201ENST00000448325 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
RAB28P3-201ENST00000448325 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
RAB28P3-201ENST00000448325 KCNA4P22459 653 aa14.83□□□□□ -0.04
RAB28P3-201ENST00000448325 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
RAB28P3-201ENST00000448325 MAPK8IP2Q13387 824 aaPredicted RBP14.4□□□□□ -0.1
RAB28P3-201ENST00000448325 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
RAB28P3-201ENST00000448325 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
RAB28P3-201ENST00000448325 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
RAB28P3-201ENST00000448325 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.14
RAB28P3-201ENST00000448325 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
RAB28P3-201ENST00000448325 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
RAB28P3-201ENST00000448325 POTEHQ6S545 545 aa14.02□□□□□ -0.17
RAB28P3-201ENST00000448325 C1QBPQ07021 282 aaKnown RBP13.95□□□□□ -0.18
RAB28P3-201ENST00000448325 NCBP3Q53F19 620 aaKnown RBP13.88□□□□□ -0.19
RAB28P3-201ENST00000448325 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
RAB28P3-201ENST00000448325 ZBTB22O15209 634 aa13.69□□□□□ -0.22
RAB28P3-201ENST00000448325 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
RAB28P3-201ENST00000448325 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
RAB28P3-201ENST00000448325 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
RAB28P3-201ENST00000448325 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
RAB28P3-201ENST00000448325 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
RAB28P3-201ENST00000448325 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
RAB28P3-201ENST00000448325 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
RAB28P3-201ENST00000448325 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
RAB28P3-201ENST00000448325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
RAB28P3-201ENST00000448325 DSG3P32926 999 aa12.9□□□□□ -0.34
RAB28P3-201ENST00000448325 FKBP8Q14318 412 aa12.87□□□□□ -0.35
RAB28P3-201ENST00000448325 CAPN15O75808 1086 aa12.84□□□□□ -0.35
RAB28P3-201ENST00000448325 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
RAB28P3-201ENST00000448325 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
RAB28P3-201ENST00000448325 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
RAB28P3-201ENST00000448325 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
RAB28P3-201ENST00000448325 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
RAB28P3-201ENST00000448325 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
RAB28P3-201ENST00000448325 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
RAB28P3-201ENST00000448325 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
RAB28P3-201ENST00000448325 ABCB7O75027 752 aa12.4□□□□□ -0.42
RAB28P3-201ENST00000448325 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
RAB28P3-201ENST00000448325 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
RAB28P3-201ENST00000448325 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
RAB28P3-201ENST00000448325 APLP2Q06481 763 aa12.28□□□□□ -0.44
RAB28P3-201ENST00000448325 PLCB2Q00722 1185 aa12.22□□□□□ -0.45
RAB28P3-201ENST00000448325 HAX1O00165 279 aa12.14□□□□□ -0.47
RAB28P3-201ENST00000448325 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
RAB28P3-201ENST00000448325 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
RAB28P3-201ENST00000448325 SAMD1Q6SPF0 538 aaPredicted RBP12.07□□□□□ -0.48
RAB28P3-201ENST00000448325 PRKCSHP14314 528 aaPredicted RBP12.05□□□□□ -0.48
RAB28P3-201ENST00000448325 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
RAB28P3-201ENST00000448325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.04□□□□□ -0.48
RAB28P3-201ENST00000448325 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
RAB28P3-201ENST00000448325 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
RAB28P3-201ENST00000448325 PIP4P2Q8N4L2 257 aa11.99□□□□□ -0.49
RAB28P3-201ENST00000448325 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
RAB28P3-201ENST00000448325 BCANQ96GW7 911 aa11.96□□□□□ -0.49
RAB28P3-201ENST00000448325 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
RAB28P3-201ENST00000448325 TAOK2Q9UL54 1235 aa11.9□□□□□ -0.5
RAB28P3-201ENST00000448325 IFNLR1Q8IU57 520 aaPredicted RBP11.89□□□□□ -0.51
RAB28P3-201ENST00000448325 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
RAB28P3-201ENST00000448325 LHX8Q68G74 356 aa11.86□□□□□ -0.51
RAB28P3-201ENST00000448325 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
RAB28P3-201ENST00000448325 PROM2Q8N271 834 aa11.86□□□□□ -0.51
RAB28P3-201ENST00000448325 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
RAB28P3-201ENST00000448325 PKD2Q13563 968 aa11.84□□□□□ -0.51
RAB28P3-201ENST00000448325 EVX2Q03828 476 aa11.75□□□□□ -0.53
RAB28P3-201ENST00000448325 POLA2Q14181 598 aa11.75□□□□□ -0.53
RAB28P3-201ENST00000448325 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
RAB28P3-201ENST00000448325 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
RAB28P3-201ENST00000448325 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
RAB28P3-201ENST00000448325 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
RAB28P3-201ENST00000448325 FBLN2P98095 1184 aa11.7□□□□□ -0.54
RAB28P3-201ENST00000448325 NPM1P06748 294 aaKnown RBP eCLIP11.65□□□□□ -0.54
RAB28P3-201ENST00000448325 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
RAB28P3-201ENST00000448325 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
RAB28P3-201ENST00000448325 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
RAB28P3-201ENST00000448325 PAXIP1Q6ZW49 1069 aaPredicted RBP11.64□□□□□ -0.55
RAB28P3-201ENST00000448325 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
RAB28P3-201ENST00000448325 ECM2O94769 699 aaPredicted RBP11.58□□□□□ -0.56
RAB28P3-201ENST00000448325 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
RAB28P3-201ENST00000448325 KLHL34Q8N239 644 aa11.54□□□□□ -0.56
RAB28P3-201ENST00000448325 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
RAB28P3-201ENST00000448325 GABBR2O75899 941 aa11.51□□□□□ -0.57
RAB28P3-201ENST00000448325 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
RAB28P3-201ENST00000448325 RGL2O15211 777 aa11.48□□□□□ -0.57
RAB28P3-201ENST00000448325 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
RAB28P3-201ENST00000448325 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
RAB28P3-201ENST00000448325 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
RAB28P3-201ENST00000448325 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
RAB28P3-201ENST00000448325 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
RAB28P3-201ENST00000448325 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms