RNA–Protein interactions for RNA: ENST00000443364.6

LINC01133-202, Transcript of long intergenic non-protein coding RNA 1133, humanhuman

TSL 5 BASIC

Gene LINC01133, Length 1,266 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01133-202ENST00000443364 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
LINC01133-202ENST00000443364 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
LINC01133-202ENST00000443364 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
LINC01133-202ENST00000443364 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
LINC01133-202ENST00000443364 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
LINC01133-202ENST00000443364 ADRA2BP18089 450 aa18.2■□□□□ 0.5
LINC01133-202ENST00000443364 FOXD1Q16676 465 aa18.15■□□□□ 0.5
LINC01133-202ENST00000443364 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
LINC01133-202ENST00000443364 KCNA4P22459 653 aa17.77■□□□□ 0.44
LINC01133-202ENST00000443364 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
LINC01133-202ENST00000443364 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
LINC01133-202ENST00000443364 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
LINC01133-202ENST00000443364 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
LINC01133-202ENST00000443364 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
LINC01133-202ENST00000443364 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
LINC01133-202ENST00000443364 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
LINC01133-202ENST00000443364 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
LINC01133-202ENST00000443364 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
LINC01133-202ENST00000443364 MSH5O43196 834 aa16.48■□□□□ 0.23
LINC01133-202ENST00000443364 ZBTB22O15209 634 aa16.34■□□□□ 0.21
LINC01133-202ENST00000443364 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
LINC01133-202ENST00000443364 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
LINC01133-202ENST00000443364 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
LINC01133-202ENST00000443364 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
LINC01133-202ENST00000443364 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
LINC01133-202ENST00000443364 HOXD11P31277 338 aaPredicted RBP15.83■□□□□ 0.12
LINC01133-202ENST00000443364 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
LINC01133-202ENST00000443364 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
LINC01133-202ENST00000443364 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
LINC01133-202ENST00000443364 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
LINC01133-202ENST00000443364 FKBP8Q14318 412 aa15.29■□□□□ 0.04
LINC01133-202ENST00000443364 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
LINC01133-202ENST00000443364 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
LINC01133-202ENST00000443364 SLC24A1O60721 1099 aa15.15■□□□□ 0.02
LINC01133-202ENST00000443364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.12■□□□□ 0.01
LINC01133-202ENST00000443364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
LINC01133-202ENST00000443364 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
LINC01133-202ENST00000443364 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
LINC01133-202ENST00000443364 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
LINC01133-202ENST00000443364 POTEDQ86YR6 584 aa14.99□□□□□ -0.01
LINC01133-202ENST00000443364 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
LINC01133-202ENST00000443364 APLP2Q06481 763 aa14.75□□□□□ -0.05
LINC01133-202ENST00000443364 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
LINC01133-202ENST00000443364 FBXO3Q9UK99 471 aa14.57□□□□□ -0.08
LINC01133-202ENST00000443364 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
LINC01133-202ENST00000443364 FBLN2P98095 1184 aa14.41□□□□□ -0.1
LINC01133-202ENST00000443364 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
LINC01133-202ENST00000443364 PROM2Q8N271 834 aa14.35□□□□□ -0.11
LINC01133-202ENST00000443364 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
LINC01133-202ENST00000443364 VASPP50552 380 aaPredicted RBP14.3□□□□□ -0.12
LINC01133-202ENST00000443364 POLA2Q14181 598 aa14.27□□□□□ -0.13
LINC01133-202ENST00000443364 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
LINC01133-202ENST00000443364 CAPN15O75808 1086 aa14.21□□□□□ -0.13
LINC01133-202ENST00000443364 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
LINC01133-202ENST00000443364 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.14
LINC01133-202ENST00000443364 PLCB2Q00722 1185 aa14.14□□□□□ -0.15
LINC01133-202ENST00000443364 ZBTB12Q9Y330 459 aaPredicted RBP14.13□□□□□ -0.15
LINC01133-202ENST00000443364 DCAF8L2P0C7V8 631 aa14.08□□□□□ -0.16
LINC01133-202ENST00000443364 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
LINC01133-202ENST00000443364 ABCB7O75027 752 aa13.99□□□□□ -0.17
LINC01133-202ENST00000443364 PKD2Q13563 968 aa13.97□□□□□ -0.17
LINC01133-202ENST00000443364 HAP1P54257 671 aaPredicted RBP13.95□□□□□ -0.18
LINC01133-202ENST00000443364 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
LINC01133-202ENST00000443364 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
LINC01133-202ENST00000443364 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
LINC01133-202ENST00000443364 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
LINC01133-202ENST00000443364 SPDYE2BA6NHP3 402 aa13.8□□□□□ -0.2
LINC01133-202ENST00000443364 SPDYE6P0CI01 402 aa13.8□□□□□ -0.2
LINC01133-202ENST00000443364 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
LINC01133-202ENST00000443364 ECM2O94769 699 aaPredicted RBP13.79□□□□□ -0.2
LINC01133-202ENST00000443364 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
LINC01133-202ENST00000443364 VSIG10Q8N0Z9 540 aa13.77□□□□□ -0.21
LINC01133-202ENST00000443364 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
LINC01133-202ENST00000443364 DSG3P32926 999 aa13.75□□□□□ -0.21
LINC01133-202ENST00000443364 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
LINC01133-202ENST00000443364 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
LINC01133-202ENST00000443364 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
LINC01133-202ENST00000443364 BCANQ96GW7 911 aa13.73□□□□□ -0.21
LINC01133-202ENST00000443364 PABPN1Q86U42 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC01133-202ENST00000443364 MIER1Q8N108 512 aa13.69□□□□□ -0.22
LINC01133-202ENST00000443364 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
LINC01133-202ENST00000443364 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
LINC01133-202ENST00000443364 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC01133-202ENST00000443364 RGL2O15211 777 aa13.59□□□□□ -0.23
LINC01133-202ENST00000443364 CFAP44Q96MT7 982 aa13.59□□□□□ -0.23
LINC01133-202ENST00000443364 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
LINC01133-202ENST00000443364 CIZ1Q9ULV3 898 aaPredicted RBP13.54□□□□□ -0.24
LINC01133-202ENST00000443364 SPRYD3Q8NCJ5 442 aa13.52□□□□□ -0.25
LINC01133-202ENST00000443364 KDM2AQ9Y2K7 1162 aa13.5□□□□□ -0.25
LINC01133-202ENST00000443364 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
LINC01133-202ENST00000443364 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
LINC01133-202ENST00000443364 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
LINC01133-202ENST00000443364 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
LINC01133-202ENST00000443364 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
LINC01133-202ENST00000443364 GSE1Q14687 1217 aa13.34□□□□□ -0.27
LINC01133-202ENST00000443364 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
LINC01133-202ENST00000443364 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
LINC01133-202ENST00000443364 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
LINC01133-202ENST00000443364 DNAJC5Q9H3Z4 198 aa13.23□□□□□ -0.29
LINC01133-202ENST00000443364 NUBP1P53384 320 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms