RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
NUDCD1-202ENST00000427660 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
NUDCD1-202ENST00000427660 PHF23Q9BUL5 403 aaPredicted RBP14.54□□□□□ -0.08
NUDCD1-202ENST00000427660 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
NUDCD1-202ENST00000427660 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
NUDCD1-202ENST00000427660 ADRA2BP18089 450 aa12.73□□□□□ -0.37
NUDCD1-202ENST00000427660 FOXD1Q16676 465 aa12.64□□□□□ -0.39
NUDCD1-202ENST00000427660 KCNA4P22459 653 aa12.6□□□□□ -0.39
NUDCD1-202ENST00000427660 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.39
NUDCD1-202ENST00000427660 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
NUDCD1-202ENST00000427660 SLC4A1APQ9BWU0 796 aaKnown RBP12.14□□□□□ -0.47
NUDCD1-202ENST00000427660 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
NUDCD1-202ENST00000427660 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
NUDCD1-202ENST00000427660 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
NUDCD1-202ENST00000427660 PIAS4Q8N2W9 510 aaPredicted RBP12□□□□□ -0.49
NUDCD1-202ENST00000427660 NPM3O75607 178 aaKnown RBP11.83□□□□□ -0.51
NUDCD1-202ENST00000427660 MSH5O43196 834 aa11.75□□□□□ -0.53
NUDCD1-202ENST00000427660 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
NUDCD1-202ENST00000427660 SCAF1Q9H7N4 1312 aaKnown RBP11.62□□□□□ -0.55
NUDCD1-202ENST00000427660 ZBTB22O15209 634 aa11.6□□□□□ -0.55
NUDCD1-202ENST00000427660 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
NUDCD1-202ENST00000427660 FOXD4L1Q9NU39 408 aa11.45□□□□□ -0.58
NUDCD1-202ENST00000427660 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
NUDCD1-202ENST00000427660 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
NUDCD1-202ENST00000427660 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
NUDCD1-202ENST00000427660 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
NUDCD1-202ENST00000427660 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
NUDCD1-202ENST00000427660 HOXD11P31277 338 aaPredicted RBP11.06□□□□□ -0.64
NUDCD1-202ENST00000427660 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
NUDCD1-202ENST00000427660 SLC4A2P04920 1241 aa11□□□□□ -0.65
NUDCD1-202ENST00000427660 DMRT2Q9Y5R5 561 aa11□□□□□ -0.65
NUDCD1-202ENST00000427660 POTEDQ86YR6 584 aa10.99□□□□□ -0.65
NUDCD1-202ENST00000427660 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.66
NUDCD1-202ENST00000427660 FKBP8Q14318 412 aa10.89□□□□□ -0.67
NUDCD1-202ENST00000427660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.58□□□□□ -0.72
NUDCD1-202ENST00000427660 HNRNPUL2Q1KMD3 747 aaKnown RBP10.58□□□□□ -0.72
NUDCD1-202ENST00000427660 SAMD1Q6SPF0 538 aaPredicted RBP10.56□□□□□ -0.72
NUDCD1-202ENST00000427660 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
NUDCD1-202ENST00000427660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.734e-6■■□□□ 11.7
NUDCD1-202ENST00000427660 DCAF8L1A6NGE4 600 aa10.47□□□□□ -0.73
NUDCD1-202ENST00000427660 U3KPZ7 1027 aaPredicted RBP10.41□□□□□ -0.74
NUDCD1-202ENST00000427660 FBXO3Q9UK99 471 aa10.39□□□□□ -0.75
NUDCD1-202ENST00000427660 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
NUDCD1-202ENST00000427660 APLP2Q06481 763 aa10.31□□□□□ -0.76
NUDCD1-202ENST00000427660 PLCB2Q00722 1185 aa10.27□□□□□ -0.76
NUDCD1-202ENST00000427660 SPDYE4A6NLX3 237 aa10.26□□□□□ -0.77
NUDCD1-202ENST00000427660 PROM2Q8N271 834 aa10.24□□□□□ -0.77
NUDCD1-202ENST00000427660 VASPP50552 380 aaPredicted RBP10.19□□□□□ -0.78
NUDCD1-202ENST00000427660 MKRN4PQ13434 485 aaPredicted RBP10.14□□□□□ -0.79
NUDCD1-202ENST00000427660 FBLN2P98095 1184 aa10.11□□□□□ -0.79
NUDCD1-202ENST00000427660 IFNLR1Q8IU57 520 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-202ENST00000427660 HAP1P54257 671 aaPredicted RBP10.08□□□□□ -0.8
NUDCD1-202ENST00000427660 BCANQ96GW7 911 aa10.04□□□□□ -0.8
NUDCD1-202ENST00000427660 DCAF8L2P0C7V8 631 aa10.03□□□□□ -0.8
NUDCD1-202ENST00000427660 RNF39Q9H2S5 420 aa10.02□□□□□ -0.81
NUDCD1-202ENST00000427660 PKD2Q13563 968 aa10.02□□□□□ -0.81
NUDCD1-202ENST00000427660 VSIG10Q8N0Z9 540 aa10.02□□□□□ -0.81
NUDCD1-202ENST00000427660 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
NUDCD1-202ENST00000427660 POLA2Q14181 598 aa9.95□□□□□ -0.82
NUDCD1-202ENST00000427660 TRHP20396 242 aaPredicted RBP9.93□□□□□ -0.82
NUDCD1-202ENST00000427660 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
NUDCD1-202ENST00000427660 C1QBPQ07021 282 aaKnown RBP9.9□□□□□ -0.82
NUDCD1-202ENST00000427660 BBXQ8WY36 941 aaPredicted RBP9.9□□□□□ -0.82
NUDCD1-202ENST00000427660 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.9□□□□□ -0.82
NUDCD1-202ENST00000427660 SPINK5Q9NQ38 1064 aaPredicted RBP9.89□□□□□ -0.83
NUDCD1-202ENST00000427660 TAOK2Q9UL54 1235 aa9.89□□□□□ -0.83
NUDCD1-202ENST00000427660 SPOCK2Q92563 424 aa9.88□□□□□ -0.83
NUDCD1-202ENST00000427660 ECM2O94769 699 aaPredicted RBP9.83□□□□□ -0.84
NUDCD1-202ENST00000427660 KLHL34Q8N239 644 aa9.83□□□□□ -0.84
NUDCD1-202ENST00000427660 CAPN15O75808 1086 aa9.83□□□□□ -0.84
NUDCD1-202ENST00000427660 PRKCSHP14314 528 aaPredicted RBP9.81□□□□□ -0.84
NUDCD1-202ENST00000427660 STAG3Q9UJ98 1225 aa9.81□□□□□ -0.84
NUDCD1-202ENST00000427660 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
NUDCD1-202ENST00000427660 PAXIP1Q6ZW49 1069 aaPredicted RBP9.78□□□□□ -0.84
NUDCD1-202ENST00000427660 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
NUDCD1-202ENST00000427660 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
NUDCD1-202ENST00000427660 SPRYD3Q8NCJ5 442 aa9.71□□□□□ -0.85
NUDCD1-202ENST00000427660 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
NUDCD1-202ENST00000427660 RGL2O15211 777 aa9.7□□□□□ -0.86
NUDCD1-202ENST00000427660 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
NUDCD1-202ENST00000427660 ZNF692Q9BU19 519 aaPredicted RBP9.7□□□□□ -0.86
NUDCD1-202ENST00000427660 SPDYE2BA6NHP3 402 aa9.68□□□□□ -0.86
NUDCD1-202ENST00000427660 SPDYE6P0CI01 402 aa9.68□□□□□ -0.86
NUDCD1-202ENST00000427660 SPDYE2Q495Y8 402 aa9.68□□□□□ -0.86
NUDCD1-202ENST00000427660 ABCB7O75027 752 aa9.67□□□□□ -0.86
NUDCD1-202ENST00000427660 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
NUDCD1-202ENST00000427660 MIER1Q8N108 512 aa9.63□□□□□ -0.87
NUDCD1-202ENST00000427660 TSHZ2Q9NRE2 1034 aa9.62□□□□□ -0.87
NUDCD1-202ENST00000427660 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
NUDCD1-202ENST00000427660 TRIM41Q8WV44 630 aa9.6□□□□□ -0.87
NUDCD1-202ENST00000427660 PLEKHG5O94827 1062 aa9.59□□□□□ -0.87
NUDCD1-202ENST00000427660 PABPN1Q86U42 306 aaKnown RBP eCLIP9.59□□□□□ -0.87
NUDCD1-202ENST00000427660 CHGAP10645 457 aaKnown RBP9.59□□□□□ -0.87
NUDCD1-202ENST00000427660 DNAJC5Q9H3Z4 198 aa9.59□□□□□ -0.87
NUDCD1-202ENST00000427660 OSCARQ8IYS5 282 aa9.57□□□□□ -0.88
NUDCD1-202ENST00000427660 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
NUDCD1-202ENST00000427660 HS6ST3Q8IZP7 471 aa9.54□□□□□ -0.88
NUDCD1-202ENST00000427660 DSG3P32926 999 aa9.53□□□□□ -0.88
NUDCD1-202ENST00000427660 NBR1Q14596 966 aa9.51□□□□□ -0.89
NUDCD1-202ENST00000427660 GSE1Q14687 1217 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms