RNA–Protein interactions for RNA: ENST00000421851.1

RC3H1-IT1-201, RC3H1 intronic transcript 1, humanhuman

TSL 5 BASIC

Gene RC3H1-IT1, Length 448 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-IT1-201ENST00000421851 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
RC3H1-IT1-201ENST00000421851 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
RC3H1-IT1-201ENST00000421851 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
RC3H1-IT1-201ENST00000421851 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
RC3H1-IT1-201ENST00000421851 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
RC3H1-IT1-201ENST00000421851 FOXD1Q16676 465 aa19.56■□□□□ 0.72
RC3H1-IT1-201ENST00000421851 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
RC3H1-IT1-201ENST00000421851 MSH5O43196 834 aa18.84■□□□□ 0.61
RC3H1-IT1-201ENST00000421851 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.48
RC3H1-IT1-201ENST00000421851 ADRA2BP18089 450 aa17.81■□□□□ 0.44
RC3H1-IT1-201ENST00000421851 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
RC3H1-IT1-201ENST00000421851 KCNA4P22459 653 aa17.54■□□□□ 0.4
RC3H1-IT1-201ENST00000421851 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
RC3H1-IT1-201ENST00000421851 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
RC3H1-IT1-201ENST00000421851 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
RC3H1-IT1-201ENST00000421851 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
RC3H1-IT1-201ENST00000421851 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
RC3H1-IT1-201ENST00000421851 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
RC3H1-IT1-201ENST00000421851 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
RC3H1-IT1-201ENST00000421851 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
RC3H1-IT1-201ENST00000421851 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
RC3H1-IT1-201ENST00000421851 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
RC3H1-IT1-201ENST00000421851 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
RC3H1-IT1-201ENST00000421851 ZBTB22O15209 634 aa16.11■□□□□ 0.17
RC3H1-IT1-201ENST00000421851 POTEHQ6S545 545 aa15.96■□□□□ 0.15
RC3H1-IT1-201ENST00000421851 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
RC3H1-IT1-201ENST00000421851 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
RC3H1-IT1-201ENST00000421851 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
RC3H1-IT1-201ENST00000421851 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
RC3H1-IT1-201ENST00000421851 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
RC3H1-IT1-201ENST00000421851 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
RC3H1-IT1-201ENST00000421851 SLC24A1O60721 1099 aa15.43■□□□□ 0.06
RC3H1-IT1-201ENST00000421851 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
RC3H1-IT1-201ENST00000421851 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
RC3H1-IT1-201ENST00000421851 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
RC3H1-IT1-201ENST00000421851 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
RC3H1-IT1-201ENST00000421851 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
RC3H1-IT1-201ENST00000421851 FKBP8Q14318 412 aa15.2■□□□□ 0.02
RC3H1-IT1-201ENST00000421851 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
RC3H1-IT1-201ENST00000421851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
RC3H1-IT1-201ENST00000421851 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
RC3H1-IT1-201ENST00000421851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
RC3H1-IT1-201ENST00000421851 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
RC3H1-IT1-201ENST00000421851 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
RC3H1-IT1-201ENST00000421851 DSG3P32926 999 aa14.52□□□□□ -0.09
RC3H1-IT1-201ENST00000421851 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
RC3H1-IT1-201ENST00000421851 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
RC3H1-IT1-201ENST00000421851 CAPN15O75808 1086 aa14.39□□□□□ -0.11
RC3H1-IT1-201ENST00000421851 FBXO3Q9UK99 471 aa14.39□□□□□ -0.11
RC3H1-IT1-201ENST00000421851 APLP2Q06481 763 aa14.3□□□□□ -0.12
RC3H1-IT1-201ENST00000421851 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
RC3H1-IT1-201ENST00000421851 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
RC3H1-IT1-201ENST00000421851 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
RC3H1-IT1-201ENST00000421851 PLCB2Q00722 1185 aa14.2□□□□□ -0.14
RC3H1-IT1-201ENST00000421851 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
RC3H1-IT1-201ENST00000421851 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
RC3H1-IT1-201ENST00000421851 HAP1P54257 671 aaPredicted RBP14.1□□□□□ -0.15
RC3H1-IT1-201ENST00000421851 FBLN2P98095 1184 aa14.1□□□□□ -0.15
RC3H1-IT1-201ENST00000421851 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
RC3H1-IT1-201ENST00000421851 CHRDL2Q6WN34 429 aa14.04□□□□□ -0.16
RC3H1-IT1-201ENST00000421851 PROM2Q8N271 834 aa14.04□□□□□ -0.16
RC3H1-IT1-201ENST00000421851 RBM42Q9BTD8 480 aaKnown RBP14.02□□□□□ -0.17
RC3H1-IT1-201ENST00000421851 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
RC3H1-IT1-201ENST00000421851 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
RC3H1-IT1-201ENST00000421851 POLA2Q14181 598 aa13.92□□□□□ -0.18
RC3H1-IT1-201ENST00000421851 PLSCR2Q9NRY7 297 aa13.92□□□□□ -0.18
RC3H1-IT1-201ENST00000421851 ABCB7O75027 752 aa13.9□□□□□ -0.18
RC3H1-IT1-201ENST00000421851 PKD2Q13563 968 aa13.88□□□□□ -0.19
RC3H1-IT1-201ENST00000421851 BCANQ96GW7 911 aa13.88□□□□□ -0.19
RC3H1-IT1-201ENST00000421851 VSIG10Q8N0Z9 540 aa13.83□□□□□ -0.2
RC3H1-IT1-201ENST00000421851 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
RC3H1-IT1-201ENST00000421851 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
RC3H1-IT1-201ENST00000421851 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
RC3H1-IT1-201ENST00000421851 PRKCSHP14314 528 aaPredicted RBP13.73□□□□□ -0.21
RC3H1-IT1-201ENST00000421851 ECM2O94769 699 aaPredicted RBP13.72□□□□□ -0.21
RC3H1-IT1-201ENST00000421851 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
RC3H1-IT1-201ENST00000421851 BBXQ8WY36 941 aaPredicted RBP13.7□□□□□ -0.22
RC3H1-IT1-201ENST00000421851 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
RC3H1-IT1-201ENST00000421851 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
RC3H1-IT1-201ENST00000421851 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
RC3H1-IT1-201ENST00000421851 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
RC3H1-IT1-201ENST00000421851 STAG3Q9UJ98 1225 aa13.6□□□□□ -0.23
RC3H1-IT1-201ENST00000421851 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
RC3H1-IT1-201ENST00000421851 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
RC3H1-IT1-201ENST00000421851 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
RC3H1-IT1-201ENST00000421851 HAX1O00165 279 aa13.52□□□□□ -0.25
RC3H1-IT1-201ENST00000421851 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
RC3H1-IT1-201ENST00000421851 MIER1Q8N108 512 aa13.52□□□□□ -0.25
RC3H1-IT1-201ENST00000421851 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
RC3H1-IT1-201ENST00000421851 RGL2O15211 777 aa13.5□□□□□ -0.25
RC3H1-IT1-201ENST00000421851 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
RC3H1-IT1-201ENST00000421851 CIZ1Q9ULV3 898 aaPredicted RBP13.44□□□□□ -0.26
RC3H1-IT1-201ENST00000421851 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
RC3H1-IT1-201ENST00000421851 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
RC3H1-IT1-201ENST00000421851 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
RC3H1-IT1-201ENST00000421851 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
RC3H1-IT1-201ENST00000421851 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
RC3H1-IT1-201ENST00000421851 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
RC3H1-IT1-201ENST00000421851 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
RC3H1-IT1-201ENST00000421851 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms