RNA–Protein interactions for RNA: ENST00000417964.2

LINC01347-201, Transcript of long intergenic non-protein coding RNA 1347, humanhuman

BASIC

Gene LINC01347, Length 355 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01347-201ENST00000417964 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
LINC01347-201ENST00000417964 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
LINC01347-201ENST00000417964 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
LINC01347-201ENST00000417964 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
LINC01347-201ENST00000417964 FOXD1Q16676 465 aa15.53■□□□□ 0.08
LINC01347-201ENST00000417964 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
LINC01347-201ENST00000417964 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
LINC01347-201ENST00000417964 MSH5O43196 834 aa14.61□□□□□ -0.07
LINC01347-201ENST00000417964 ADRA2BP18089 450 aa14.48□□□□□ -0.09
LINC01347-201ENST00000417964 PIAS4Q8N2W9 510 aaPredicted RBP14.43□□□□□ -0.1
LINC01347-201ENST00000417964 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
LINC01347-201ENST00000417964 KCNA4P22459 653 aa14.12□□□□□ -0.15
LINC01347-201ENST00000417964 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
LINC01347-201ENST00000417964 PPP4R3CPQ6ZMV5 832 aa13.72□□□□□ -0.21
LINC01347-201ENST00000417964 SLC4A1APQ9BWU0 796 aaKnown RBP13.58□□□□□ -0.24
LINC01347-201ENST00000417964 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
LINC01347-201ENST00000417964 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
LINC01347-201ENST00000417964 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
LINC01347-201ENST00000417964 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
LINC01347-201ENST00000417964 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
LINC01347-201ENST00000417964 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
LINC01347-201ENST00000417964 DMRT2Q9Y5R5 561 aa13.11□□□□□ -0.31
LINC01347-201ENST00000417964 ZBTB22O15209 634 aa13□□□□□ -0.33
LINC01347-201ENST00000417964 FOXD4L1Q9NU39 408 aa12.84□□□□□ -0.35
LINC01347-201ENST00000417964 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
LINC01347-201ENST00000417964 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
LINC01347-201ENST00000417964 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
LINC01347-201ENST00000417964 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
LINC01347-201ENST00000417964 HOXD11P31277 338 aaPredicted RBP12.58□□□□□ -0.4
LINC01347-201ENST00000417964 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
LINC01347-201ENST00000417964 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
LINC01347-201ENST00000417964 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
LINC01347-201ENST00000417964 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
LINC01347-201ENST00000417964 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
LINC01347-201ENST00000417964 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
LINC01347-201ENST00000417964 FKBP8Q14318 412 aa12.15□□□□□ -0.46
LINC01347-201ENST00000417964 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
LINC01347-201ENST00000417964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC01347-201ENST00000417964 SLC24A1O60721 1099 aa12.01□□□□□ -0.49
LINC01347-201ENST00000417964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
LINC01347-201ENST00000417964 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
LINC01347-201ENST00000417964 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
LINC01347-201ENST00000417964 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
LINC01347-201ENST00000417964 U3KPZ7 1027 aaPredicted RBP11.87□□□□□ -0.51
LINC01347-201ENST00000417964 APLP2Q06481 763 aa11.7□□□□□ -0.54
LINC01347-201ENST00000417964 ZNF219Q9P2Y4 722 aaPredicted RBP11.69□□□□□ -0.54
LINC01347-201ENST00000417964 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
LINC01347-201ENST00000417964 CAPN15O75808 1086 aa11.57□□□□□ -0.56
LINC01347-201ENST00000417964 DSG3P32926 999 aa11.57□□□□□ -0.56
LINC01347-201ENST00000417964 POTEHQ6S545 545 aa11.55□□□□□ -0.56
LINC01347-201ENST00000417964 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
LINC01347-201ENST00000417964 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
LINC01347-201ENST00000417964 FBLN2P98095 1184 aa11.45□□□□□ -0.58
LINC01347-201ENST00000417964 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
LINC01347-201ENST00000417964 TRHP20396 242 aaPredicted RBP11.42□□□□□ -0.58
LINC01347-201ENST00000417964 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
LINC01347-201ENST00000417964 PROM2Q8N271 834 aa11.36□□□□□ -0.59
LINC01347-201ENST00000417964 POLA2Q14181 598 aa11.34□□□□□ -0.59
LINC01347-201ENST00000417964 ABCB7O75027 752 aa11.3□□□□□ -0.6
LINC01347-201ENST00000417964 DCAF8L2P0C7V8 631 aa11.23□□□□□ -0.61
LINC01347-201ENST00000417964 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
LINC01347-201ENST00000417964 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
LINC01347-201ENST00000417964 PLCB2Q00722 1185 aa11.2□□□□□ -0.62
LINC01347-201ENST00000417964 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
LINC01347-201ENST00000417964 PKD2Q13563 968 aa11.09□□□□□ -0.63
LINC01347-201ENST00000417964 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
LINC01347-201ENST00000417964 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
LINC01347-201ENST00000417964 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.65
LINC01347-201ENST00000417964 SPOCK2Q92563 424 aa11.01□□□□□ -0.65
LINC01347-201ENST00000417964 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
LINC01347-201ENST00000417964 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
LINC01347-201ENST00000417964 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.65
LINC01347-201ENST00000417964 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
LINC01347-201ENST00000417964 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
LINC01347-201ENST00000417964 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
LINC01347-201ENST00000417964 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
LINC01347-201ENST00000417964 CHRDL2Q6WN34 429 aa10.92□□□□□ -0.66
LINC01347-201ENST00000417964 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
LINC01347-201ENST00000417964 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
LINC01347-201ENST00000417964 PABPN1Q86U42 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC01347-201ENST00000417964 MIER1Q8N108 512 aa10.87□□□□□ -0.67
LINC01347-201ENST00000417964 VSIG10Q8N0Z9 540 aa10.86□□□□□ -0.67
LINC01347-201ENST00000417964 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
LINC01347-201ENST00000417964 BCANQ96GW7 911 aa10.86□□□□□ -0.67
LINC01347-201ENST00000417964 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
LINC01347-201ENST00000417964 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
LINC01347-201ENST00000417964 CFAP44Q96MT7 982 aa10.81□□□□□ -0.68
LINC01347-201ENST00000417964 RGL2O15211 777 aa10.8□□□□□ -0.68
LINC01347-201ENST00000417964 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC01347-201ENST00000417964 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
LINC01347-201ENST00000417964 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
LINC01347-201ENST00000417964 SPRYD3Q8NCJ5 442 aa10.7□□□□□ -0.7
LINC01347-201ENST00000417964 AKT1S1Q96B36 256 aa10.7□□□□□ -0.7
LINC01347-201ENST00000417964 CHGAP10645 457 aaKnown RBP10.69□□□□□ -0.7
LINC01347-201ENST00000417964 KDM2AQ9Y2K7 1162 aa10.69□□□□□ -0.7
LINC01347-201ENST00000417964 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
LINC01347-201ENST00000417964 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
LINC01347-201ENST00000417964 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
LINC01347-201ENST00000417964 TRIM41Q8WV44 630 aa10.65□□□□□ -0.7
LINC01347-201ENST00000417964 REM2Q8IYK8 340 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms