RNA–Protein interactions for RNA: ENST00000411404.1

RNU2-6P-201, Transcript of RNA, U2 small nuclear 6, pseudogene, humanhuman

BASIC

Gene RNU2-6P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-6P-201ENST00000411404 CHIC1Q5VXU3 224 aa15.57■□□□□ 0.08
RNU2-6P-201ENST00000411404 AEBP2Q6ZN18 517 aaPredicted RBP15.27■□□□□ 0.04
RNU2-6P-201ENST00000411404 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
RNU2-6P-201ENST00000411404 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
RNU2-6P-201ENST00000411404 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
RNU2-6P-201ENST00000411404 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
RNU2-6P-201ENST00000411404 ADRA2BP18089 450 aa12.16□□□□□ -0.46
RNU2-6P-201ENST00000411404 KCNA4P22459 653 aa12.04□□□□□ -0.48
RNU2-6P-201ENST00000411404 PPP6R1Q9UPN7 881 aa11.93□□□□□ -0.5
RNU2-6P-201ENST00000411404 FOXD1Q16676 465 aa11.87□□□□□ -0.51
RNU2-6P-201ENST00000411404 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
RNU2-6P-201ENST00000411404 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
RNU2-6P-201ENST00000411404 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
RNU2-6P-201ENST00000411404 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
RNU2-6P-201ENST00000411404 PIAS4Q8N2W9 510 aaPredicted RBP11.45□□□□□ -0.58
RNU2-6P-201ENST00000411404 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
RNU2-6P-201ENST00000411404 NPM3O75607 178 aaKnown RBP11.26□□□□□ -0.61
RNU2-6P-201ENST00000411404 ZBTB22O15209 634 aa11.05□□□□□ -0.64
RNU2-6P-201ENST00000411404 CNKSR2Q8WXI2 1034 aa11.04□□□□□ -0.64
RNU2-6P-201ENST00000411404 SCAF1Q9H7N4 1312 aaKnown RBP11□□□□□ -0.65
RNU2-6P-201ENST00000411404 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
RNU2-6P-201ENST00000411404 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
RNU2-6P-201ENST00000411404 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
RNU2-6P-201ENST00000411404 MAPK8IP2Q13387 824 aaPredicted RBP10.71□□□□□ -0.69
RNU2-6P-201ENST00000411404 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
RNU2-6P-201ENST00000411404 MSH5O43196 834 aa10.7□□□□□ -0.7
RNU2-6P-201ENST00000411404 RNF216Q9NWF9 866 aaPredicted RBP10.63□□□□□ -0.71
RNU2-6P-201ENST00000411404 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
RNU2-6P-201ENST00000411404 FKBP8Q14318 412 aa10.51□□□□□ -0.73
RNU2-6P-201ENST00000411404 SLC4A2P04920 1241 aa10.42□□□□□ -0.74
RNU2-6P-201ENST00000411404 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
RNU2-6P-201ENST00000411404 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
RNU2-6P-201ENST00000411404 HOXD11P31277 338 aaPredicted RBP10.37□□□□□ -0.75
RNU2-6P-201ENST00000411404 DMRT2Q9Y5R5 561 aa10.37□□□□□ -0.75
RNU2-6P-201ENST00000411404 DCAF8L1A6NGE4 600 aa10.12□□□□□ -0.79
RNU2-6P-201ENST00000411404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.06□□□□□ -0.8
RNU2-6P-201ENST00000411404 ATF5Q9Y2D1 282 aaPredicted RBP10.06□□□□□ -0.8
RNU2-6P-201ENST00000411404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.01□□□□□ -0.81
RNU2-6P-201ENST00000411404 HNRNPUL2Q1KMD3 747 aaKnown RBP10.01□□□□□ -0.81
RNU2-6P-201ENST00000411404 SAMD1Q6SPF0 538 aaPredicted RBP10□□□□□ -0.81
RNU2-6P-201ENST00000411404 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.82
RNU2-6P-201ENST00000411404 FBXO3Q9UK99 471 aa9.9□□□□□ -0.82
RNU2-6P-201ENST00000411404 U3KPZ7 1027 aaPredicted RBP9.88□□□□□ -0.83
RNU2-6P-201ENST00000411404 HAP1P54257 671 aaPredicted RBP9.85□□□□□ -0.83
RNU2-6P-201ENST00000411404 PLCB2Q00722 1185 aa9.85□□□□□ -0.83
RNU2-6P-201ENST00000411404 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
RNU2-6P-201ENST00000411404 SPDYE4A6NLX3 237 aa9.82□□□□□ -0.84
RNU2-6P-201ENST00000411404 APLP2Q06481 763 aa9.77□□□□□ -0.85
RNU2-6P-201ENST00000411404 VASPP50552 380 aaPredicted RBP9.74□□□□□ -0.85
RNU2-6P-201ENST00000411404 BCANQ96GW7 911 aa9.68□□□□□ -0.86
RNU2-6P-201ENST00000411404 FBLN2P98095 1184 aa9.67□□□□□ -0.86
RNU2-6P-201ENST00000411404 MKRN4PQ13434 485 aaPredicted RBP9.63□□□□□ -0.87
RNU2-6P-201ENST00000411404 IFNLR1Q8IU57 520 aaPredicted RBP9.63□□□□□ -0.87
RNU2-6P-201ENST00000411404 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
RNU2-6P-201ENST00000411404 TRHP20396 242 aaPredicted RBP9.58□□□□□ -0.88
RNU2-6P-201ENST00000411404 PROM2Q8N271 834 aa9.57□□□□□ -0.88
RNU2-6P-201ENST00000411404 PKD2Q13563 968 aa9.56□□□□□ -0.88
RNU2-6P-201ENST00000411404 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
RNU2-6P-201ENST00000411404 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
RNU2-6P-201ENST00000411404 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.54□□□□□ -0.88
RNU2-6P-201ENST00000411404 TAOK2Q9UL54 1235 aa9.54□□□□□ -0.88
RNU2-6P-201ENST00000411404 POLA2Q14181 598 aa9.5□□□□□ -0.89
RNU2-6P-201ENST00000411404 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
RNU2-6P-201ENST00000411404 ECM2O94769 699 aaPredicted RBP9.48□□□□□ -0.89
RNU2-6P-201ENST00000411404 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
RNU2-6P-201ENST00000411404 CAPN15O75808 1086 aa9.46□□□□□ -0.9
RNU2-6P-201ENST00000411404 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
RNU2-6P-201ENST00000411404 SPOCK2Q92563 424 aa9.46□□□□□ -0.9
RNU2-6P-201ENST00000411404 BBXQ8WY36 941 aaPredicted RBP9.45□□□□□ -0.9
RNU2-6P-201ENST00000411404 SPINK5Q9NQ38 1064 aaPredicted RBP9.44□□□□□ -0.9
RNU2-6P-201ENST00000411404 KDM2AQ9Y2K7 1162 aa9.38□□□□□ -0.91
RNU2-6P-201ENST00000411404 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
RNU2-6P-201ENST00000411404 ZBTB12Q9Y330 459 aaPredicted RBP9.37□□□□□ -0.91
RNU2-6P-201ENST00000411404 NPM1P06748 294 aaKnown RBP eCLIP9.36□□□□□ -0.91
RNU2-6P-201ENST00000411404 ABCB7O75027 752 aa9.33□□□□□ -0.92
RNU2-6P-201ENST00000411404 SPRYD3Q8NCJ5 442 aa9.33□□□□□ -0.92
RNU2-6P-201ENST00000411404 RGL2O15211 777 aa9.32□□□□□ -0.92
RNU2-6P-201ENST00000411404 CACNB1Q02641 598 aaPredicted RBP9.3□□□□□ -0.92
RNU2-6P-201ENST00000411404 MIER1Q8N108 512 aa9.29□□□□□ -0.92
RNU2-6P-201ENST00000411404 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
RNU2-6P-201ENST00000411404 STAG3Q9UJ98 1225 aa9.29□□□□□ -0.92
RNU2-6P-201ENST00000411404 CIZ1Q9ULV3 898 aaPredicted RBP9.29□□□□□ -0.92
RNU2-6P-201ENST00000411404 TSHZ2Q9NRE2 1034 aa9.28□□□□□ -0.92
RNU2-6P-201ENST00000411404 CHGAP10645 457 aaKnown RBP9.27□□□□□ -0.93
RNU2-6P-201ENST00000411404 NBR1Q14596 966 aa9.25□□□□□ -0.93
RNU2-6P-201ENST00000411404 PLEKHG5O94827 1062 aa9.22□□□□□ -0.93
RNU2-6P-201ENST00000411404 RNF39Q9H2S5 420 aa9.19□□□□□ -0.94
RNU2-6P-201ENST00000411404 PABPN1Q86U42 306 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNU2-6P-201ENST00000411404 OSCARQ8IYS5 282 aa9.18□□□□□ -0.94
RNU2-6P-201ENST00000411404 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
RNU2-6P-201ENST00000411404 SPDYE2BA6NHP3 402 aa9.14□□□□□ -0.95
RNU2-6P-201ENST00000411404 SPDYE6P0CI01 402 aa9.14□□□□□ -0.95
RNU2-6P-201ENST00000411404 C1QBPQ07021 282 aaKnown RBP9.14□□□□□ -0.95
RNU2-6P-201ENST00000411404 SPDYE2Q495Y8 402 aa9.14□□□□□ -0.95
RNU2-6P-201ENST00000411404 SSUH2Q9Y2M2 353 aa9.1□□□□□ -0.95
RNU2-6P-201ENST00000411404 TRIM41Q8WV44 630 aa9.08□□□□□ -0.96
RNU2-6P-201ENST00000411404 HS6ST3Q8IZP7 471 aa9.06□□□□□ -0.96
RNU2-6P-201ENST00000411404 TULP1O00294 542 aaPredicted RBP9.01□□□□□ -0.97
RNU2-6P-201ENST00000411404 GSE1Q14687 1217 aa9.01□□□□□ -0.97
RNU2-6P-201ENST00000411404 DSG3P32926 999 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms