RNA–Protein interactions for RNA: ENST00000405148.6

ALS2CR12-203, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ALS2CR12, Length 2,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-203ENST00000405148 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
ALS2CR12-203ENST00000405148 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
ALS2CR12-203ENST00000405148 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
ALS2CR12-203ENST00000405148 PLPPR3Q6T4P5 718 aa14.6□□□□□ -0.07
ALS2CR12-203ENST00000405148 SENP3Q9H4L4 574 aaPredicted RBP14.5□□□□□ -0.09
ALS2CR12-203ENST00000405148 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
ALS2CR12-203ENST00000405148 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
ALS2CR12-203ENST00000405148 ADRA2BP18089 450 aa13.8□□□□□ -0.2
ALS2CR12-203ENST00000405148 KCNA4P22459 653 aa13.63□□□□□ -0.23
ALS2CR12-203ENST00000405148 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
ALS2CR12-203ENST00000405148 FOXD1Q16676 465 aa13.46□□□□□ -0.26
ALS2CR12-203ENST00000405148 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
ALS2CR12-203ENST00000405148 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
ALS2CR12-203ENST00000405148 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
ALS2CR12-203ENST00000405148 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
ALS2CR12-203ENST00000405148 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
ALS2CR12-203ENST00000405148 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
ALS2CR12-203ENST00000405148 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
ALS2CR12-203ENST00000405148 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
ALS2CR12-203ENST00000405148 ZBTB22O15209 634 aa12.58□□□□□ -0.4
ALS2CR12-203ENST00000405148 CNKSR2Q8WXI2 1034 aa12.42□□□□□ -0.42
ALS2CR12-203ENST00000405148 SCAF1Q9H7N4 1312 aaKnown RBP12.29□□□□□ -0.44
ALS2CR12-203ENST00000405148 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
ALS2CR12-203ENST00000405148 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
ALS2CR12-203ENST00000405148 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
ALS2CR12-203ENST00000405148 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
ALS2CR12-203ENST00000405148 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
ALS2CR12-203ENST00000405148 TAOK2Q9UL54 1235 aa12.03□□□□□ -0.48
ALS2CR12-203ENST00000405148 FKBP8Q14318 412 aa12.01□□□□□ -0.49
ALS2CR12-203ENST00000405148 BCANQ96GW7 911 aa12.01□□□□□ -0.49
ALS2CR12-203ENST00000405148 MSH5O43196 834 aa12□□□□□ -0.49
ALS2CR12-203ENST00000405148 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
ALS2CR12-203ENST00000405148 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
ALS2CR12-203ENST00000405148 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
ALS2CR12-203ENST00000405148 TPRNQ4KMQ1 711 aa11.85□□□□□ -0.51
ALS2CR12-203ENST00000405148 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
ALS2CR12-203ENST00000405148 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
ALS2CR12-203ENST00000405148 ARXQ96QS3 562 aa11.78□□□□□ -0.52
ALS2CR12-203ENST00000405148 HOXD11P31277 338 aaPredicted RBP11.74□□□□□ -0.53
ALS2CR12-203ENST00000405148 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
ALS2CR12-203ENST00000405148 TULP1O00294 542 aaPredicted RBP11.72□□□□□ -0.53
ALS2CR12-203ENST00000405148 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
ALS2CR12-203ENST00000405148 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
ALS2CR12-203ENST00000405148 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
ALS2CR12-203ENST00000405148 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
ALS2CR12-203ENST00000405148 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
ALS2CR12-203ENST00000405148 GTF3C3Q9Y5Q9 886 aa11.49□□□□□ -0.57
ALS2CR12-203ENST00000405148 HOMEZQ8IX15 550 aa11.48□□□□□ -0.57
ALS2CR12-203ENST00000405148 ABCC9O60706 1549 aa11.47□□□□□ -0.57
ALS2CR12-203ENST00000405148 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
ALS2CR12-203ENST00000405148 ATF5Q9Y2D1 282 aaPredicted RBP11.43□□□□□ -0.58
ALS2CR12-203ENST00000405148 FBLN2P98095 1184 aa11.38□□□□□ -0.59
ALS2CR12-203ENST00000405148 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
ALS2CR12-203ENST00000405148 DCAF8L1A6NGE4 600 aa11.3□□□□□ -0.6
ALS2CR12-203ENST00000405148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.26□□□□□ -0.61
ALS2CR12-203ENST00000405148 RANGAP1P46060 587 aaPredicted RBP11.24□□□□□ -0.61
ALS2CR12-203ENST00000405148 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
ALS2CR12-203ENST00000405148 NISCHQ9Y2I1 1504 aa11.21□□□□□ -0.61
ALS2CR12-203ENST00000405148 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
ALS2CR12-203ENST00000405148 C14orf37Q86TY3 774 aa11.17□□□□□ -0.62
ALS2CR12-203ENST00000405148 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
ALS2CR12-203ENST00000405148 PAXIP1Q6ZW49 1069 aaPredicted RBP11.16□□□□□ -0.62
ALS2CR12-203ENST00000405148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
ALS2CR12-203ENST00000405148 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
ALS2CR12-203ENST00000405148 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
ALS2CR12-203ENST00000405148 CFAP44Q96MT7 982 aa11.14□□□□□ -0.63
ALS2CR12-203ENST00000405148 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
ALS2CR12-203ENST00000405148 PKD2Q13563 968 aa11.09□□□□□ -0.63
ALS2CR12-203ENST00000405148 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
ALS2CR12-203ENST00000405148 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
ALS2CR12-203ENST00000405148 ZNF219Q9P2Y4 722 aaPredicted RBP11.07□□□□□ -0.64
ALS2CR12-203ENST00000405148 NBR1Q14596 966 aa11.06□□□□□ -0.64
ALS2CR12-203ENST00000405148 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
ALS2CR12-203ENST00000405148 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.64
ALS2CR12-203ENST00000405148 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
ALS2CR12-203ENST00000405148 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
ALS2CR12-203ENST00000405148 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
ALS2CR12-203ENST00000405148 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
ALS2CR12-203ENST00000405148 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
ALS2CR12-203ENST00000405148 SPRYD3Q8NCJ5 442 aa10.91□□□□□ -0.66
ALS2CR12-203ENST00000405148 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
ALS2CR12-203ENST00000405148 PROM2Q8N271 834 aa10.87□□□□□ -0.67
ALS2CR12-203ENST00000405148 APLP2Q06481 763 aa10.83□□□□□ -0.68
ALS2CR12-203ENST00000405148 NPM2Q86SE8 214 aaKnown RBP10.83□□□□□ -0.68
ALS2CR12-203ENST00000405148 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
ALS2CR12-203ENST00000405148 TRIM26Q12899 539 aaPredicted RBP10.77□□□□□ -0.69
ALS2CR12-203ENST00000405148 UBTFP17480 764 aaKnown RBP10.75□□□□□ -0.69
ALS2CR12-203ENST00000405148 TRHP20396 242 aaPredicted RBP10.74□□□□□ -0.69
ALS2CR12-203ENST00000405148 POLA2Q14181 598 aa10.7□□□□□ -0.7
ALS2CR12-203ENST00000405148 SPINK5Q9NQ38 1064 aaPredicted RBP10.69□□□□□ -0.7
ALS2CR12-203ENST00000405148 RGL2O15211 777 aa10.68□□□□□ -0.7
ALS2CR12-203ENST00000405148 CCDC180Q9P1Z9 1646 aa10.65□□□□□ -0.71
ALS2CR12-203ENST00000405148 HRCP23327 699 aa10.63□□□□□ -0.71
ALS2CR12-203ENST00000405148 RB1CC1Q8TDY2 1594 aa10.61□□□□□ -0.71
ALS2CR12-203ENST00000405148 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
ALS2CR12-203ENST00000405148 CUX2O14529 1486 aa10.59□□□□□ -0.71
ALS2CR12-203ENST00000405148 CAPN15O75808 1086 aa10.58□□□□□ -0.72
ALS2CR12-203ENST00000405148 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
ALS2CR12-203ENST00000405148 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
ALS2CR12-203ENST00000405148 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms