RNA–Protein interactions for RNA: ENST00000391296.2

U3.29-201, humanhuman

BASIC

Gene U3, Length 212 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.29-201ENST00000391296 AEBP2Q6ZN18 517 aaPredicted RBP14.42□□□□□ -0.1
U3.29-201ENST00000391296 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
U3.29-201ENST00000391296 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
U3.29-201ENST00000391296 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
U3.29-201ENST00000391296 PLPPR3Q6T4P5 718 aa11.53□□□□□ -0.56
U3.29-201ENST00000391296 FOXD1Q16676 465 aa11.46□□□□□ -0.57
U3.29-201ENST00000391296 MSH5O43196 834 aa10.83□□□□□ -0.68
U3.29-201ENST00000391296 PIAS4Q8N2W9 510 aaPredicted RBP10.78□□□□□ -0.68
U3.29-201ENST00000391296 ADRA2BP18089 450 aa10.76□□□□□ -0.69
U3.29-201ENST00000391296 PPP6R1Q9UPN7 881 aa10.75□□□□□ -0.69
U3.29-201ENST00000391296 KCNA4P22459 653 aa10.57□□□□□ -0.72
U3.29-201ENST00000391296 EHMT2Q96KQ7 1210 aa10.56□□□□□ -0.72
U3.29-201ENST00000391296 POTEDQ86YR6 584 aa10.26□□□□□ -0.77
U3.29-201ENST00000391296 PPP4R3CPQ6ZMV5 832 aa10.22□□□□□ -0.77
U3.29-201ENST00000391296 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
U3.29-201ENST00000391296 NCBP3Q53F19 620 aaKnown RBP10.14□□□□□ -0.79
U3.29-201ENST00000391296 CSRNP3Q8WYN3 585 aa10.07□□□□□ -0.8
U3.29-201ENST00000391296 SCAF1Q9H7N4 1312 aaKnown RBP10.02□□□□□ -0.81
U3.29-201ENST00000391296 NPM3O75607 178 aaKnown RBP9.94□□□□□ -0.82
U3.29-201ENST00000391296 DMRT2Q9Y5R5 561 aa9.86□□□□□ -0.83
U3.29-201ENST00000391296 CNKSR2Q8WXI2 1034 aa9.81□□□□□ -0.84
U3.29-201ENST00000391296 MAPK8IP2Q13387 824 aaPredicted RBP9.79□□□□□ -0.84
U3.29-201ENST00000391296 ZBTB22O15209 634 aa9.69□□□□□ -0.86
U3.29-201ENST00000391296 FOXD4L1Q9NU39 408 aa9.59□□□□□ -0.87
U3.29-201ENST00000391296 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
U3.29-201ENST00000391296 RNF216Q9NWF9 866 aaPredicted RBP9.51□□□□□ -0.89
U3.29-201ENST00000391296 DNAJC5BQ9UF47 199 aa9.44□□□□□ -0.9
U3.29-201ENST00000391296 DCAF8L1A6NGE4 600 aa9.39□□□□□ -0.91
U3.29-201ENST00000391296 AMER1Q5JTC6 1135 aaPredicted RBP9.24□□□□□ -0.93
U3.29-201ENST00000391296 SLC4A2P04920 1241 aa9.23□□□□□ -0.93
U3.29-201ENST00000391296 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
U3.29-201ENST00000391296 SLC24A1O60721 1099 aa9.2□□□□□ -0.94
U3.29-201ENST00000391296 MYCNP04198 464 aaPredicted RBP9.2□□□□□ -0.94
U3.29-201ENST00000391296 RNF39Q9H2S5 420 aa9.19□□□□□ -0.94
U3.29-201ENST00000391296 ATXN8OSP0DMR3 200 aa9.16□□□□□ -0.94
U3.29-201ENST00000391296 FKBP8Q14318 412 aa9.16□□□□□ -0.94
U3.29-201ENST00000391296 CACNB1Q02641 598 aaPredicted RBP9.15□□□□□ -0.94
U3.29-201ENST00000391296 C1QBPQ07021 282 aaKnown RBP9.12□□□□□ -0.95
U3.29-201ENST00000391296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.08□□□□□ -0.96
U3.29-201ENST00000391296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.91□□□□□ -0.98
U3.29-201ENST00000391296 HNRNPUL2Q1KMD3 747 aaKnown RBP8.91□□□□□ -0.98
U3.29-201ENST00000391296 SAMD1Q6SPF0 538 aaPredicted RBP8.88□□□□□ -0.99
U3.29-201ENST00000391296 ATF5Q9Y2D1 282 aaPredicted RBP8.88□□□□□ -0.99
U3.29-201ENST00000391296 U3KPZ7 1027 aaPredicted RBP8.85□□□□□ -0.99
U3.29-201ENST00000391296 APLP2Q06481 763 aa8.83□□□□□ -1
U3.29-201ENST00000391296 ZNF219Q9P2Y4 722 aaPredicted RBP8.71□□□□□ -1.02
U3.29-201ENST00000391296 CAPN15O75808 1086 aa8.69□□□□□ -1.02
U3.29-201ENST00000391296 FBXO3Q9UK99 471 aa8.68□□□□□ -1.02
U3.29-201ENST00000391296 SPINK5Q9NQ38 1064 aaPredicted RBP8.65□□□□□ -1.02
U3.29-201ENST00000391296 SPDYE4A6NLX3 237 aa8.64□□□□□ -1.03
U3.29-201ENST00000391296 DSG3P32926 999 aa8.62□□□□□ -1.03
U3.29-201ENST00000391296 DCAF8L2P0C7V8 631 aa8.56□□□□□ -1.04
U3.29-201ENST00000391296 TRHP20396 242 aaPredicted RBP8.56□□□□□ -1.04
U3.29-201ENST00000391296 FBLN2P98095 1184 aa8.56□□□□□ -1.04
U3.29-201ENST00000391296 VASPP50552 380 aaPredicted RBP8.53□□□□□ -1.04
U3.29-201ENST00000391296 MKRN4PQ13434 485 aaPredicted RBP8.51□□□□□ -1.05
U3.29-201ENST00000391296 PLCB2Q00722 1185 aa8.5□□□□□ -1.05
U3.29-201ENST00000391296 HAP1P54257 671 aaPredicted RBP8.47□□□□□ -1.05
U3.29-201ENST00000391296 PROM2Q8N271 834 aa8.45□□□□□ -1.06
U3.29-201ENST00000391296 POLA2Q14181 598 aa8.44□□□□□ -1.06
U3.29-201ENST00000391296 ABCB7O75027 752 aa8.43□□□□□ -1.06
U3.29-201ENST00000391296 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
U3.29-201ENST00000391296 ZBTB12Q9Y330 459 aaPredicted RBP8.36□□□□□ -1.07
U3.29-201ENST00000391296 KLHL34Q8N239 644 aa8.35□□□□□ -1.07
U3.29-201ENST00000391296 RBM42Q9BTD8 480 aaKnown RBP8.34□□□□□ -1.07
U3.29-201ENST00000391296 PKD2Q13563 968 aa8.33□□□□□ -1.08
U3.29-201ENST00000391296 BCANQ96GW7 911 aa8.3□□□□□ -1.08
U3.29-201ENST00000391296 SPOCK2Q92563 424 aa8.29□□□□□ -1.08
U3.29-201ENST00000391296 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.28□□□□□ -1.08
U3.29-201ENST00000391296 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
U3.29-201ENST00000391296 VSIG10Q8N0Z9 540 aa8.25□□□□□ -1.09
U3.29-201ENST00000391296 PLCD3Q8N3E9 789 aa8.24□□□□□ -1.09
U3.29-201ENST00000391296 ZNF692Q9BU19 519 aaPredicted RBP8.22□□□□□ -1.09
U3.29-201ENST00000391296 BBXQ8WY36 941 aaPredicted RBP8.21□□□□□ -1.1
U3.29-201ENST00000391296 CFAP44Q96MT7 982 aa8.21□□□□□ -1.1
U3.29-201ENST00000391296 STAG3Q9UJ98 1225 aa8.21□□□□□ -1.1
U3.29-201ENST00000391296 PAXIP1Q6ZW49 1069 aaPredicted RBP8.2□□□□□ -1.1
U3.29-201ENST00000391296 PRKCSHP14314 528 aaPredicted RBP8.16□□□□□ -1.1
U3.29-201ENST00000391296 MIER1Q8N108 512 aa8.16□□□□□ -1.1
U3.29-201ENST00000391296 OSCARQ8IYS5 282 aa8.15□□□□□ -1.1
U3.29-201ENST00000391296 TAOK2Q9UL54 1235 aa8.15□□□□□ -1.1
U3.29-201ENST00000391296 SPDYE2BA6NHP3 402 aa8.13□□□□□ -1.11
U3.29-201ENST00000391296 RGL2O15211 777 aa8.13□□□□□ -1.11
U3.29-201ENST00000391296 PLEKHG5O94827 1062 aa8.13□□□□□ -1.11
U3.29-201ENST00000391296 NPM1P06748 294 aaKnown RBP eCLIP8.13□□□□□ -1.11
U3.29-201ENST00000391296 SPDYE6P0CI01 402 aa8.13□□□□□ -1.11
U3.29-201ENST00000391296 SPDYE2Q495Y8 402 aa8.13□□□□□ -1.11
U3.29-201ENST00000391296 PABPN1Q86U42 306 aaKnown RBP eCLIP8.13□□□□□ -1.11
U3.29-201ENST00000391296 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
U3.29-201ENST00000391296 CIZ1Q9ULV3 898 aaPredicted RBP8.12□□□□□ -1.11
U3.29-201ENST00000391296 POTEHQ6S545 545 aa8.1□□□□□ -1.11
U3.29-201ENST00000391296 SPRYD3Q8NCJ5 442 aa8.1□□□□□ -1.11
U3.29-201ENST00000391296 KDM2AQ9Y2K7 1162 aa8.09□□□□□ -1.11
U3.29-201ENST00000391296 SSUH2Q9Y2M2 353 aa8.09□□□□□ -1.11
U3.29-201ENST00000391296 TPRNQ4KMQ1 711 aa8.08□□□□□ -1.12
U3.29-201ENST00000391296 ZBTB47Q9UFB7 747 aaPredicted RBP8.08□□□□□ -1.12
U3.29-201ENST00000391296 CHGAP10645 457 aaKnown RBP8.07□□□□□ -1.12
U3.29-201ENST00000391296 TSHZ2Q9NRE2 1034 aa8.03□□□□□ -1.12
U3.29-201ENST00000391296 CHRDL2Q6WN34 429 aa8.02□□□□□ -1.13
U3.29-201ENST00000391296 REM2Q8IYK8 340 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms