RNA–Protein interactions for RNA: ENST00000384399.1

RNU6-729P-201, Transcript of RNA, U6 small nuclear 729, pseudogene, humanhuman

BASIC

Gene RNU6-729P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-729P-201ENST00000384399 CHIC1Q5VXU3 224 aa13.46□□□□□ -0.25
RNU6-729P-201ENST00000384399 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
RNU6-729P-201ENST00000384399 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
RNU6-729P-201ENST00000384399 PHF23Q9BUL5 403 aaPredicted RBP12.1□□□□□ -0.47
RNU6-729P-201ENST00000384399 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
RNU6-729P-201ENST00000384399 PLPPR3Q6T4P5 718 aa11.48□□□□□ -0.57
RNU6-729P-201ENST00000384399 KCNA4P22459 653 aa11.36□□□□□ -0.59
RNU6-729P-201ENST00000384399 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
RNU6-729P-201ENST00000384399 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
RNU6-729P-201ENST00000384399 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
RNU6-729P-201ENST00000384399 SLC4A1APQ9BWU0 796 aaKnown RBP10.92□□□□□ -0.66
RNU6-729P-201ENST00000384399 NCBP3Q53F19 620 aaKnown RBP10.86□□□□□ -0.67
RNU6-729P-201ENST00000384399 ADRA2BP18089 450 aa10.83□□□□□ -0.68
RNU6-729P-201ENST00000384399 PRKCSHP14314 528 aaPredicted RBP10.64□□□□□ -0.71
RNU6-729P-201ENST00000384399 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
RNU6-729P-201ENST00000384399 ZBTB22O15209 634 aa10.55□□□□□ -0.72
RNU6-729P-201ENST00000384399 SENP3Q9H4L4 574 aaPredicted RBP10.46□□□□□ -0.73
RNU6-729P-201ENST00000384399 TAOK2Q9UL54 1235 aa10.35□□□□□ -0.75
RNU6-729P-201ENST00000384399 PPP6R1Q9UPN7 881 aa10.34□□□□□ -0.75
RNU6-729P-201ENST00000384399 TIMELESSQ9UNS1 1208 aa10.26□□□□□ -0.77
RNU6-729P-201ENST00000384399 BCANQ96GW7 911 aa10.25□□□□□ -0.77
RNU6-729P-201ENST00000384399 NPM3O75607 178 aaKnown RBP10.23□□□□□ -0.77
RNU6-729P-201ENST00000384399 PPP4R3CPQ6ZMV5 832 aa10.23□□□□□ -0.77
RNU6-729P-201ENST00000384399 PLCB2Q00722 1185 aa10.22□□□□□ -0.77
RNU6-729P-201ENST00000384399 ARXQ96QS3 562 aa10.2□□□□□ -0.78
RNU6-729P-201ENST00000384399 TPRNQ4KMQ1 711 aa10.18□□□□□ -0.78
RNU6-729P-201ENST00000384399 FKBP8Q14318 412 aa10.13□□□□□ -0.79
RNU6-729P-201ENST00000384399 TULP1O00294 542 aaPredicted RBP10.12□□□□□ -0.79
RNU6-729P-201ENST00000384399 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
RNU6-729P-201ENST00000384399 FOXD4L1Q9NU39 408 aa9.99□□□□□ -0.81
RNU6-729P-201ENST00000384399 HOMEZQ8IX15 550 aa9.92□□□□□ -0.82
RNU6-729P-201ENST00000384399 VSIG10Q8N0Z9 540 aa9.91□□□□□ -0.82
RNU6-729P-201ENST00000384399 GTF3C3Q9Y5Q9 886 aa9.9□□□□□ -0.82
RNU6-729P-201ENST00000384399 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
RNU6-729P-201ENST00000384399 FBLN2P98095 1184 aa9.75□□□□□ -0.85
RNU6-729P-201ENST00000384399 FOXD1Q16676 465 aa9.74□□□□□ -0.85
RNU6-729P-201ENST00000384399 RANGAP1P46060 587 aaPredicted RBP9.7□□□□□ -0.86
RNU6-729P-201ENST00000384399 TMEM132AQ24JP5 1023 aa9.69□□□□□ -0.86
RNU6-729P-201ENST00000384399 DCAF8L2P0C7V8 631 aa9.67□□□□□ -0.86
RNU6-729P-201ENST00000384399 ERICH6Q7L0X2 663 aa9.66□□□□□ -0.86
RNU6-729P-201ENST00000384399 PODXL2Q9NZ53 605 aa9.66□□□□□ -0.86
RNU6-729P-201ENST00000384399 CNKSR2Q8WXI2 1034 aa9.61□□□□□ -0.87
RNU6-729P-201ENST00000384399 C14orf37Q86TY3 774 aa9.59□□□□□ -0.87
RNU6-729P-201ENST00000384399 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
RNU6-729P-201ENST00000384399 DNAJC5BQ9UF47 199 aa9.53□□□□□ -0.88
RNU6-729P-201ENST00000384399 APLP2Q06481 763 aa9.49□□□□□ -0.89
RNU6-729P-201ENST00000384399 PAXIP1Q6ZW49 1069 aaPredicted RBP9.47□□□□□ -0.89
RNU6-729P-201ENST00000384399 ATXN8OSP0DMR3 200 aa9.45□□□□□ -0.9
RNU6-729P-201ENST00000384399 CFAP44Q96MT7 982 aa9.44□□□□□ -0.9
RNU6-729P-201ENST00000384399 SUPT5HO00267 1087 aaKnown RBP9.43□□□□□ -0.9
RNU6-729P-201ENST00000384399 TSHZ2Q9NRE2 1034 aa9.43□□□□□ -0.9
RNU6-729P-201ENST00000384399 PKD2Q13563 968 aa9.42□□□□□ -0.9
RNU6-729P-201ENST00000384399 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
RNU6-729P-201ENST00000384399 NPM2Q86SE8 214 aaKnown RBP9.4□□□□□ -0.9
RNU6-729P-201ENST00000384399 BBXQ8WY36 941 aaPredicted RBP9.4□□□□□ -0.9
RNU6-729P-201ENST00000384399 PIAS4Q8N2W9 510 aaPredicted RBP9.39□□□□□ -0.91
RNU6-729P-201ENST00000384399 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.39□□□□□ -0.91
RNU6-729P-201ENST00000384399 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
RNU6-729P-201ENST00000384399 NBR1Q14596 966 aa9.37□□□□□ -0.91
RNU6-729P-201ENST00000384399 TRIM26Q12899 539 aaPredicted RBP9.36□□□□□ -0.91
RNU6-729P-201ENST00000384399 UBTFP17480 764 aaKnown RBP9.31□□□□□ -0.92
RNU6-729P-201ENST00000384399 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
RNU6-729P-201ENST00000384399 HRCP23327 699 aa9.27□□□□□ -0.93
RNU6-729P-201ENST00000384399 FBXO3Q9UK99 471 aa9.27□□□□□ -0.93
RNU6-729P-201ENST00000384399 MYCNP04198 464 aaPredicted RBP9.26□□□□□ -0.93
RNU6-729P-201ENST00000384399 VASPP50552 380 aaPredicted RBP9.26□□□□□ -0.93
RNU6-729P-201ENST00000384399 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
RNU6-729P-201ENST00000384399 PELP1Q8IZL8 1130 aaKnown RBP9.23□□□□□ -0.93
RNU6-729P-201ENST00000384399 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.94
RNU6-729P-201ENST00000384399 SCAF1Q9H7N4 1312 aaKnown RBP9.19□□□□□ -0.94
RNU6-729P-201ENST00000384399 ATF5Q9Y2D1 282 aaPredicted RBP9.16□□□□□ -0.94
RNU6-729P-201ENST00000384399 TTBK1Q5TCY1 1321 aaPredicted RBP9.15□□□□□ -0.94
RNU6-729P-201ENST00000384399 RNF216Q9NWF9 866 aaPredicted RBP9.14□□□□□ -0.95
RNU6-729P-201ENST00000384399 MAPK8IP2Q13387 824 aaPredicted RBP9.11□□□□□ -0.95
RNU6-729P-201ENST00000384399 ECM2O94769 699 aaPredicted RBP9.08□□□□□ -0.96
RNU6-729P-201ENST00000384399 RGL2O15211 777 aa9.05□□□□□ -0.96
RNU6-729P-201ENST00000384399 TRHP20396 242 aaPredicted RBP9.04□□□□□ -0.96
RNU6-729P-201ENST00000384399 MYT1Q01538 1121 aa9.03□□□□□ -0.96
RNU6-729P-201ENST00000384399 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
RNU6-729P-201ENST00000384399 PROM2Q8N271 834 aa9.02□□□□□ -0.97
RNU6-729P-201ENST00000384399 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
RNU6-729P-201ENST00000384399 SPDYE4A6NLX3 237 aa9□□□□□ -0.97
RNU6-729P-201ENST00000384399 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
RNU6-729P-201ENST00000384399 ARID3AQ99856 593 aa8.89□□□□□ -0.99
RNU6-729P-201ENST00000384399 EIF5BO60841 1220 aaKnown RBP8.88□□□□□ -0.99
RNU6-729P-201ENST00000384399 SPOCK2Q92563 424 aa8.88□□□□□ -0.99
RNU6-729P-201ENST00000384399 ZMYND15Q9H091 742 aa8.85□□□□□ -0.99
RNU6-729P-201ENST00000384399 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
RNU6-729P-201ENST00000384399 HOXD11P31277 338 aaPredicted RBP8.84□□□□□ -0.99
RNU6-729P-201ENST00000384399 NEUROD2Q15784 382 aa8.84□□□□□ -0.99
RNU6-729P-201ENST00000384399 C1orf115Q9H7X2 142 aa8.84□□□□□ -0.99
RNU6-729P-201ENST00000384399 LMOD2Q6P5Q4 547 aa8.82□□□□□ -1
RNU6-729P-201ENST00000384399 NECTIN2Q92692 538 aa8.81□□□□□ -1
RNU6-729P-201ENST00000384399 RSPH6AQ9H0K4 717 aa8.81□□□□□ -1
RNU6-729P-201ENST00000384399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.8□□□□□ -1
RNU6-729P-201ENST00000384399 IGSF3O75054 1194 aa8.77□□□□□ -1.01
RNU6-729P-201ENST00000384399 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
RNU6-729P-201ENST00000384399 ZBTB7CA1YPR0 619 aa8.76□□□□□ -1.01
RNU6-729P-201ENST00000384399 NKX1-1Q15270 411 aaPredicted RBP8.73□□□□□ -1.01
RNU6-729P-201ENST00000384399 HS6ST3Q8IZP7 471 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms