RNA–Protein interactions for RNA: ENST00000364028.1

RNU6-1243P-201, Transcript of RNA, U6 small nuclear 1243, pseudogene, humanhuman

BASIC

Gene RNU6-1243P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1243P-201ENST00000364028 CHIC1Q5VXU3 224 aa13.84□□□□□ -0.19
RNU6-1243P-201ENST00000364028 AEBP2Q6ZN18 517 aaPredicted RBP13.64□□□□□ -0.23
RNU6-1243P-201ENST00000364028 PHF23Q9BUL5 403 aaPredicted RBP12.24□□□□□ -0.45
RNU6-1243P-201ENST00000364028 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
RNU6-1243P-201ENST00000364028 SENP3Q9H4L4 574 aaPredicted RBP11.67□□□□□ -0.54
RNU6-1243P-201ENST00000364028 PLPPR3Q6T4P5 718 aa11.55□□□□□ -0.56
RNU6-1243P-201ENST00000364028 FOXD1Q16676 465 aa11.1□□□□□ -0.63
RNU6-1243P-201ENST00000364028 EHMT2Q96KQ7 1210 aa10.87□□□□□ -0.67
RNU6-1243P-201ENST00000364028 ADRA2BP18089 450 aa10.8□□□□□ -0.68
RNU6-1243P-201ENST00000364028 KCNA4P22459 653 aa10.77□□□□□ -0.69
RNU6-1243P-201ENST00000364028 MSH5O43196 834 aa10.65□□□□□ -0.7
RNU6-1243P-201ENST00000364028 PPP6R1Q9UPN7 881 aa10.6□□□□□ -0.71
RNU6-1243P-201ENST00000364028 CSRNP3Q8WYN3 585 aa10.4□□□□□ -0.74
RNU6-1243P-201ENST00000364028 SLC4A1APQ9BWU0 796 aaKnown RBP10.39□□□□□ -0.75
RNU6-1243P-201ENST00000364028 PPP4R3CPQ6ZMV5 832 aa10.27□□□□□ -0.77
RNU6-1243P-201ENST00000364028 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
RNU6-1243P-201ENST00000364028 PIAS4Q8N2W9 510 aaPredicted RBP10.06□□□□□ -0.8
RNU6-1243P-201ENST00000364028 NPM3O75607 178 aaKnown RBP10.03□□□□□ -0.8
RNU6-1243P-201ENST00000364028 ZBTB22O15209 634 aa9.9□□□□□ -0.82
RNU6-1243P-201ENST00000364028 SLC24A1O60721 1099 aa9.84□□□□□ -0.83
RNU6-1243P-201ENST00000364028 CNKSR2Q8WXI2 1034 aa9.83□□□□□ -0.84
RNU6-1243P-201ENST00000364028 CACNB1Q02641 598 aaPredicted RBP9.8□□□□□ -0.84
RNU6-1243P-201ENST00000364028 SCAF1Q9H7N4 1312 aaKnown RBP9.76□□□□□ -0.85
RNU6-1243P-201ENST00000364028 FOXD4L1Q9NU39 408 aa9.72□□□□□ -0.85
RNU6-1243P-201ENST00000364028 AMER1Q5JTC6 1135 aaPredicted RBP9.71□□□□□ -0.86
RNU6-1243P-201ENST00000364028 RTN4Q9NQC3 1192 aaKnown RBP9.69□□□□□ -0.86
RNU6-1243P-201ENST00000364028 DNAJC5BQ9UF47 199 aa9.59□□□□□ -0.87
RNU6-1243P-201ENST00000364028 MAPK8IP2Q13387 824 aaPredicted RBP9.46□□□□□ -0.9
RNU6-1243P-201ENST00000364028 RNF216Q9NWF9 866 aaPredicted RBP9.46□□□□□ -0.9
RNU6-1243P-201ENST00000364028 FKBP8Q14318 412 aa9.38□□□□□ -0.91
RNU6-1243P-201ENST00000364028 ATXN8OSP0DMR3 200 aa9.33□□□□□ -0.92
RNU6-1243P-201ENST00000364028 POTEHQ6S545 545 aa9.31□□□□□ -0.92
RNU6-1243P-201ENST00000364028 SLC4A2P04920 1241 aa9.3□□□□□ -0.92
RNU6-1243P-201ENST00000364028 MYCNP04198 464 aaPredicted RBP9.26□□□□□ -0.93
RNU6-1243P-201ENST00000364028 HOXD11P31277 338 aaPredicted RBP9.24□□□□□ -0.93
RNU6-1243P-201ENST00000364028 DMRT2Q9Y5R5 561 aa9.18□□□□□ -0.94
RNU6-1243P-201ENST00000364028 RNF39Q9H2S5 420 aa9.05□□□□□ -0.96
RNU6-1243P-201ENST00000364028 ATF5Q9Y2D1 282 aaPredicted RBP8.95□□□□□ -0.98
RNU6-1243P-201ENST00000364028 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
RNU6-1243P-201ENST00000364028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.89□□□□□ -0.99
RNU6-1243P-201ENST00000364028 HNRNPUL2Q1KMD3 747 aaKnown RBP8.89□□□□□ -0.99
RNU6-1243P-201ENST00000364028 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
RNU6-1243P-201ENST00000364028 SAMD1Q6SPF0 538 aaPredicted RBP8.88□□□□□ -0.99
RNU6-1243P-201ENST00000364028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.86□□□□□ -0.99
RNU6-1243P-201ENST00000364028 HAP1P54257 671 aaPredicted RBP8.83□□□□□ -1
RNU6-1243P-201ENST00000364028 C1QBPQ07021 282 aaKnown RBP8.83□□□□□ -1
RNU6-1243P-201ENST00000364028 DCAF8L1A6NGE4 600 aa8.81□□□□□ -1
RNU6-1243P-201ENST00000364028 BCANQ96GW7 911 aa8.79□□□□□ -1
RNU6-1243P-201ENST00000364028 DCAF8L2P0C7V8 631 aa8.77□□□□□ -1.01
RNU6-1243P-201ENST00000364028 SPDYE4A6NLX3 237 aa8.75□□□□□ -1.01
RNU6-1243P-201ENST00000364028 ZNF219Q9P2Y4 722 aaPredicted RBP8.75□□□□□ -1.01
RNU6-1243P-201ENST00000364028 U3KPZ7 1027 aaPredicted RBP8.75□□□□□ -1.01
RNU6-1243P-201ENST00000364028 VASPP50552 380 aaPredicted RBP8.72□□□□□ -1.01
RNU6-1243P-201ENST00000364028 PRKCSHP14314 528 aaPredicted RBP8.71□□□□□ -1.02
RNU6-1243P-201ENST00000364028 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
RNU6-1243P-201ENST00000364028 TAOK2Q9UL54 1235 aa8.68□□□□□ -1.02
RNU6-1243P-201ENST00000364028 APLP2Q06481 763 aa8.65□□□□□ -1.02
RNU6-1243P-201ENST00000364028 IFNLR1Q8IU57 520 aaPredicted RBP8.64□□□□□ -1.03
RNU6-1243P-201ENST00000364028 PROM2Q8N271 834 aa8.64□□□□□ -1.03
RNU6-1243P-201ENST00000364028 PKD2Q13563 968 aa8.61□□□□□ -1.03
RNU6-1243P-201ENST00000364028 MKRN4PQ13434 485 aaPredicted RBP8.59□□□□□ -1.03
RNU6-1243P-201ENST00000364028 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.58□□□□□ -1.04
RNU6-1243P-201ENST00000364028 FBLN2P98095 1184 aa8.57□□□□□ -1.04
RNU6-1243P-201ENST00000364028 TPRNQ4KMQ1 711 aa8.55□□□□□ -1.04
RNU6-1243P-201ENST00000364028 BBXQ8WY36 941 aaPredicted RBP8.54□□□□□ -1.04
RNU6-1243P-201ENST00000364028 KDM2AQ9Y2K7 1162 aa8.52□□□□□ -1.05
RNU6-1243P-201ENST00000364028 PAXIP1Q6ZW49 1069 aaPredicted RBP8.51□□□□□ -1.05
RNU6-1243P-201ENST00000364028 CFAP44Q96MT7 982 aa8.49□□□□□ -1.05
RNU6-1243P-201ENST00000364028 ECM2O94769 699 aaPredicted RBP8.48□□□□□ -1.05
RNU6-1243P-201ENST00000364028 KLHL34Q8N239 644 aa8.48□□□□□ -1.05
RNU6-1243P-201ENST00000364028 SPOCK2Q92563 424 aa8.46□□□□□ -1.06
RNU6-1243P-201ENST00000364028 NPM1P06748 294 aaKnown RBP eCLIP8.44□□□□□ -1.06
RNU6-1243P-201ENST00000364028 TRHP20396 242 aaPredicted RBP8.41□□□□□ -1.06
RNU6-1243P-201ENST00000364028 POLA2Q14181 598 aa8.41□□□□□ -1.06
RNU6-1243P-201ENST00000364028 SPRYD3Q8NCJ5 442 aa8.41□□□□□ -1.06
RNU6-1243P-201ENST00000364028 TSHZ2Q9NRE2 1034 aa8.37□□□□□ -1.07
RNU6-1243P-201ENST00000364028 RGL2O15211 777 aa8.34□□□□□ -1.07
RNU6-1243P-201ENST00000364028 PLCD3Q8N3E9 789 aa8.32□□□□□ -1.08
RNU6-1243P-201ENST00000364028 SPINK5Q9NQ38 1064 aaPredicted RBP8.32□□□□□ -1.08
RNU6-1243P-201ENST00000364028 STAG3Q9UJ98 1225 aa8.32□□□□□ -1.08
RNU6-1243P-201ENST00000364028 ZBTB12Q9Y330 459 aaPredicted RBP8.32□□□□□ -1.08
RNU6-1243P-201ENST00000364028 NBR1Q14596 966 aa8.3□□□□□ -1.08
RNU6-1243P-201ENST00000364028 CAPN15O75808 1086 aa8.29□□□□□ -1.08
RNU6-1243P-201ENST00000364028 CHGAP10645 457 aaKnown RBP8.28□□□□□ -1.08
RNU6-1243P-201ENST00000364028 MIER1Q8N108 512 aa8.26□□□□□ -1.09
RNU6-1243P-201ENST00000364028 SP7Q8TDD2 431 aaPredicted RBP8.25□□□□□ -1.09
RNU6-1243P-201ENST00000364028 CIZ1Q9ULV3 898 aaPredicted RBP8.24□□□□□ -1.09
RNU6-1243P-201ENST00000364028 ZNF692Q9BU19 519 aaPredicted RBP8.23□□□□□ -1.09
RNU6-1243P-201ENST00000364028 DNAJC5Q9H3Z4 198 aa8.21□□□□□ -1.1
RNU6-1243P-201ENST00000364028 TULP1O00294 542 aaPredicted RBP8.19□□□□□ -1.1
RNU6-1243P-201ENST00000364028 ABCB7O75027 752 aa8.18□□□□□ -1.1
RNU6-1243P-201ENST00000364028 TIMELESSQ9UNS1 1208 aa8.18□□□□□ -1.1
RNU6-1243P-201ENST00000364028 PLEKHG5O94827 1062 aa8.17□□□□□ -1.1
RNU6-1243P-201ENST00000364028 DSG3P32926 999 aa8.16□□□□□ -1.1
RNU6-1243P-201ENST00000364028 TRIM41Q8WV44 630 aa8.16□□□□□ -1.1
RNU6-1243P-201ENST00000364028 ZBTB47Q9UFB7 747 aaPredicted RBP8.16□□□□□ -1.1
RNU6-1243P-201ENST00000364028 GTF3C3Q9Y5Q9 886 aa8.16□□□□□ -1.1
RNU6-1243P-201ENST00000364028 HS6ST3Q8IZP7 471 aa8.15□□□□□ -1.1
RNU6-1243P-201ENST00000364028 SPDYE2BA6NHP3 402 aa8.13□□□□□ -1.11
RNU6-1243P-201ENST00000364028 SPDYE6P0CI01 402 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms