RNA–Protein interactions for RNA: ENST00000355848.7

C1D-201, Transcript of C1D nuclear receptor corepressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1D, Length 2,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1D-201ENST00000355848 AEBP2Q6ZN18 517 aaPredicted RBP14.77□□□□□ -0.05
C1D-201ENST00000355848 POTEDQ86YR6 584 aa14.77□□□□□ -0.05
C1D-201ENST00000355848 CHIC1Q5VXU3 224 aa14.41□□□□□ -0.1
C1D-201ENST00000355848 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
C1D-201ENST00000355848 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
C1D-201ENST00000355848 MSH5O43196 834 aa12.45□□□□□ -0.42
C1D-201ENST00000355848 FOXD1Q16676 465 aa12.29□□□□□ -0.44
C1D-201ENST00000355848 PLPPR3Q6T4P5 718 aa11.95□□□□□ -0.5
C1D-201ENST00000355848 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
C1D-201ENST00000355848 POTEHQ6S545 545 aa11.29□□□□□ -0.6
C1D-201ENST00000355848 ADRA2BP18089 450 aa11.19□□□□□ -0.62
C1D-201ENST00000355848 PIAS4Q8N2W9 510 aaPredicted RBP11.14□□□□□ -0.63
C1D-201ENST00000355848 PPP6R1Q9UPN7 881 aa11.08□□□□□ -0.64
C1D-201ENST00000355848 KCNA4P22459 653 aa10.99□□□□□ -0.65
C1D-201ENST00000355848 EHMT2Q96KQ7 1210 aa10.92□□□□□ -0.66
C1D-201ENST00000355848 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
C1D-201ENST00000355848 SLC4A1APQ9BWU0 796 aaKnown RBP10.56□□□□□ -0.72
C1D-201ENST00000355848 CSRNP3Q8WYN3 585 aa10.52□□□□□ -0.73
C1D-201ENST00000355848 NCBP3Q53F19 620 aaKnown RBP10.48□□□□□ -0.73
C1D-201ENST00000355848 NPM3O75607 178 aaKnown RBP10.33□□□□□ -0.76
C1D-201ENST00000355848 RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
C1D-201ENST00000355848 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
C1D-201ENST00000355848 CNKSR2Q8WXI2 1034 aa10.18□□□□□ -0.78
C1D-201ENST00000355848 DMRT2Q9Y5R5 561 aa10.14□□□□□ -0.79
C1D-201ENST00000355848 SCAF1Q9H7N4 1312 aaKnown RBP10.14□□□□□ -0.79
C1D-201ENST00000355848 ZBTB22O15209 634 aa10.11□□□□□ -0.79
C1D-201ENST00000355848 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
C1D-201ENST00000355848 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
C1D-201ENST00000355848 MAPK8IP2Q13387 824 aaPredicted RBP9.91□□□□□ -0.82
C1D-201ENST00000355848 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.83
C1D-201ENST00000355848 RNF216Q9NWF9 866 aaPredicted RBP9.84□□□□□ -0.83
C1D-201ENST00000355848 SP7Q8TDD2 431 aaPredicted RBP9.83□□□□□ -0.84
C1D-201ENST00000355848 DCAF8L1A6NGE4 600 aa9.71□□□□□ -0.85
C1D-201ENST00000355848 HOXD11P31277 338 aaPredicted RBP9.64□□□□□ -0.87
C1D-201ENST00000355848 SLC4A2P04920 1241 aa9.62□□□□□ -0.87
C1D-201ENST00000355848 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
C1D-201ENST00000355848 AMER1Q5JTC6 1135 aaPredicted RBP9.59□□□□□ -0.87
C1D-201ENST00000355848 SLC24A1O60721 1099 aa9.57□□□□□ -0.88
C1D-201ENST00000355848 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
C1D-201ENST00000355848 ATXN8OSP0DMR3 200 aa9.53□□□□□ -0.88
C1D-201ENST00000355848 FKBP8Q14318 412 aa9.48□□□□□ -0.89
C1D-201ENST00000355848 ATF5Q9Y2D1 282 aaPredicted RBP9.25□□□□□ -0.93
C1D-201ENST00000355848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.23□□□□□ -0.93
C1D-201ENST00000355848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.2□□□□□ -0.94
C1D-201ENST00000355848 HNRNPUL2Q1KMD3 747 aaKnown RBP9.2□□□□□ -0.94
C1D-201ENST00000355848 SAMD1Q6SPF0 538 aaPredicted RBP9.19□□□□□ -0.94
C1D-201ENST00000355848 CHRDL2Q6WN34 429 aa9.19□□□□□ -0.94
C1D-201ENST00000355848 LHX8Q68G74 356 aa9.18□□□□□ -0.94
C1D-201ENST00000355848 U3KPZ7 1027 aaPredicted RBP9.12□□□□□ -0.95
C1D-201ENST00000355848 DSG3P32926 999 aa9.03□□□□□ -0.96
C1D-201ENST00000355848 ZNF219Q9P2Y4 722 aaPredicted RBP9.03□□□□□ -0.96
C1D-201ENST00000355848 FBXO3Q9UK99 471 aa8.99□□□□□ -0.97
C1D-201ENST00000355848 PCDH10Q9P2E7 1040 aa8.97□□□□□ -0.97
C1D-201ENST00000355848 APLP2Q06481 763 aa8.96□□□□□ -0.98
C1D-201ENST00000355848 SPDYE4A6NLX3 237 aa8.95□□□□□ -0.98
C1D-201ENST00000355848 RBM42Q9BTD8 480 aaKnown RBP8.93□□□□□ -0.98
C1D-201ENST00000355848 HAX1O00165 279 aa8.9□□□□□ -0.98
C1D-201ENST00000355848 MKRN4PQ13434 485 aaPredicted RBP8.86□□□□□ -0.99
C1D-201ENST00000355848 VASPP50552 380 aaPredicted RBP8.84□□□□□ -0.99
C1D-201ENST00000355848 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
C1D-201ENST00000355848 PROM2Q8N271 834 aa8.84□□□□□ -0.99
C1D-201ENST00000355848 FBLN2P98095 1184 aa8.82□□□□□ -1
C1D-201ENST00000355848 IFNLR1Q8IU57 520 aaPredicted RBP8.78□□□□□ -1
C1D-201ENST00000355848 DCAF8L2P0C7V8 631 aa8.77□□□□□ -1.01
C1D-201ENST00000355848 TRHP20396 242 aaPredicted RBP8.77□□□□□ -1.01
C1D-201ENST00000355848 POLA2Q14181 598 aa8.74□□□□□ -1.01
C1D-201ENST00000355848 HAP1P54257 671 aaPredicted RBP8.73□□□□□ -1.01
C1D-201ENST00000355848 SPINK5Q9NQ38 1064 aaPredicted RBP8.73□□□□□ -1.01
C1D-201ENST00000355848 CAPN15O75808 1086 aa8.71□□□□□ -1.02
C1D-201ENST00000355848 POTEMA6NI47 508 aa8.7□□□□□ -1.02
C1D-201ENST00000355848 PKD2Q13563 968 aa8.68□□□□□ -1.02
C1D-201ENST00000355848 POTEGQ6S5H5 508 aa8.61□□□□□ -1.03
C1D-201ENST00000355848 BCANQ96GW7 911 aa8.61□□□□□ -1.03
C1D-201ENST00000355848 ZBTB12Q9Y330 459 aaPredicted RBP8.61□□□□□ -1.03
C1D-201ENST00000355848 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
C1D-201ENST00000355848 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
C1D-201ENST00000355848 SPOCK2Q92563 424 aa8.57□□□□□ -1.04
C1D-201ENST00000355848 ABCB7O75027 752 aa8.55□□□□□ -1.04
C1D-201ENST00000355848 PIP4P2Q8N4L2 257 aa8.55□□□□□ -1.04
C1D-201ENST00000355848 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.55□□□□□ -1.04
C1D-201ENST00000355848 ECM2O94769 699 aaPredicted RBP8.54□□□□□ -1.04
C1D-201ENST00000355848 BBXQ8WY36 941 aaPredicted RBP8.53□□□□□ -1.04
C1D-201ENST00000355848 ZNF692Q9BU19 519 aaPredicted RBP8.5□□□□□ -1.05
C1D-201ENST00000355848 STAG3Q9UJ98 1225 aa8.5□□□□□ -1.05
C1D-201ENST00000355848 PRKCSHP14314 528 aaPredicted RBP8.49□□□□□ -1.05
C1D-201ENST00000355848 PAXIP1Q6ZW49 1069 aaPredicted RBP8.49□□□□□ -1.05
C1D-201ENST00000355848 PLCD3Q8N3E9 789 aa8.49□□□□□ -1.05
C1D-201ENST00000355848 TAOK2Q9UL54 1235 aa8.49□□□□□ -1.05
C1D-201ENST00000355848 NPM1P06748 294 aaKnown RBP eCLIP8.48□□□□□ -1.05
C1D-201ENST00000355848 CFAP44Q96MT7 982 aa8.48□□□□□ -1.05
C1D-201ENST00000355848 KDM2AQ9Y2K7 1162 aa8.46□□□□□ -1.06
C1D-201ENST00000355848 RGL2O15211 777 aa8.44□□□□□ -1.06
C1D-201ENST00000355848 MIER1Q8N108 512 aa8.44□□□□□ -1.06
C1D-201ENST00000355848 SPDYE2BA6NHP3 402 aa8.43□□□□□ -1.06
C1D-201ENST00000355848 SPDYE6P0CI01 402 aa8.43□□□□□ -1.06
C1D-201ENST00000355848 SPDYE2Q495Y8 402 aa8.43□□□□□ -1.06
C1D-201ENST00000355848 OSCARQ8IYS5 282 aa8.42□□□□□ -1.06
C1D-201ENST00000355848 EVX2Q03828 476 aa8.42□□□□□ -1.06
C1D-201ENST00000355848 SSUH2Q9Y2M2 353 aa8.41□□□□□ -1.06
C1D-201ENST00000355848 PABPN1Q86U42 306 aaKnown RBP eCLIP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms