RNA–Protein interactions for RNA: ENST00000343533.9

ATP7A-202, Transcript of ATPase copper transporting alpha, humanhuman

TSL 5 BASIC

Gene ATP7A, Length 8,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7A-202ENST00000343533 DCAF8L2P0C7V8 631 aa9.25□□□□□ -0.93
ATP7A-202ENST00000343533 EHMT2Q96KQ7 1210 aa8.75□□□□□ -1.01
ATP7A-202ENST00000343533 SHROOM4Q9ULL8 1493 aa8.33□□□□□ -1.08
ATP7A-202ENST00000343533 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
ATP7A-202ENST00000343533 SUPT5HO00267 1087 aaKnown RBP8.32□□□□□ -1.08
ATP7A-202ENST00000343533 RANGAP1P46060 587 aaPredicted RBP8.27□□□□□ -1.09
ATP7A-202ENST00000343533 ATP1B4Q9UN42 357 aaPredicted RBP8.07□□□□□ -1.12
ATP7A-202ENST00000343533 CHIC1Q5VXU3 224 aa8.06□□□□□ -1.12
ATP7A-202ENST00000343533 FAM9AQ8IZU1 332 aaPredicted RBP8.05□□□□□ -1.12
ATP7A-202ENST00000343533 MYT1LQ9UL68 1186 aa7.86□□□□□ -1.15
ATP7A-202ENST00000343533 CNGB1Q14028 1251 aaPredicted RBP7.83□□□□□ -1.16
ATP7A-202ENST00000343533 PPARGC1BQ86YN6 1023 aaKnown RBP7.8□□□□□ -1.16
ATP7A-202ENST00000343533 PLPPR3Q6T4P5 718 aa7.76□□□□□ -1.17
ATP7A-202ENST00000343533 APLP2Q06481 763 aa7.76□□□□□ -1.17
ATP7A-202ENST00000343533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.69□□□□□ -1.18
ATP7A-202ENST00000343533 HNRNPUL2Q1KMD3 747 aaKnown RBP7.69□□□□□ -1.18
ATP7A-202ENST00000343533 POLR3GLQ9BT43 218 aa7.69□□□□□ -1.18
ATP7A-202ENST00000343533 PCGF6Q9BYE7 350 aa7.67□□□□□ -1.18
ATP7A-202ENST00000343533 SLC4A1APQ9BWU0 796 aaKnown RBP7.64□□□□□ -1.19
ATP7A-202ENST00000343533 ITGAEP38570 1179 aa7.63□□□□□ -1.19
ATP7A-202ENST00000343533 YTHDC1Q96MU7 727 aaKnown RBP7.56□□□□□ -1.2
ATP7A-202ENST00000343533 UBTFP17480 764 aaKnown RBP7.56□□□□□ -1.2
ATP7A-202ENST00000343533 MYT1Q01538 1121 aa7.56□□□□□ -1.2
ATP7A-202ENST00000343533 BCL11AQ9H165 835 aa7.55□□□□□ -1.2
ATP7A-202ENST00000343533 SENP3Q9H4L4 574 aaPredicted RBP7.52□□□□□ -1.21
ATP7A-202ENST00000343533 ARID3CA6NKF2 412 aa7.49□□□□□ -1.21
ATP7A-202ENST00000343533 FBLN2P98095 1184 aa7.49□□□□□ -1.21
ATP7A-202ENST00000343533 PABPN1Q86U42 306 aaKnown RBP eCLIP7.48□□□□□ -1.21
ATP7A-202ENST00000343533 PLEKHG5O94827 1062 aa7.48□□□□□ -1.21
ATP7A-202ENST00000343533 SLC24A1O60721 1099 aa7.48□□□□□ -1.21
ATP7A-202ENST00000343533 TRIM41Q8WV44 630 aa7.44□□□□□ -1.22
ATP7A-202ENST00000343533 NISCHQ9Y2I1 1504 aa7.44□□□□□ -1.22
ATP7A-202ENST00000343533 BCANQ96GW7 911 aa7.43□□□□□ -1.22
ATP7A-202ENST00000343533 CCER1Q8TC90 406 aaPredicted RBP7.42□□□□□ -1.22
ATP7A-202ENST00000343533 PELP1Q8IZL8 1130 aaKnown RBP7.39□□□□□ -1.23
ATP7A-202ENST00000343533 ERICH6Q7L0X2 663 aa7.39□□□□□ -1.23
ATP7A-202ENST00000343533 A0A0G2JS52 829 aa7.33□□□□□ -1.24
ATP7A-202ENST00000343533 SCAF1Q9H7N4 1312 aaKnown RBP7.3□□□□□ -1.24
ATP7A-202ENST00000343533 ZNF326Q5BKZ1 582 aaKnown RBP7.29□□□□□ -1.24
ATP7A-202ENST00000343533 ABCC9O60706 1549 aa7.26□□□□□ -1.25
ATP7A-202ENST00000343533 P3H3Q8IVL6 736 aa7.25□□□□□ -1.25
ATP7A-202ENST00000343533 FAM50AQ14320 339 aaKnown RBP7.23□□□□□ -1.25
ATP7A-202ENST00000343533 ZBTB7CA1YPR0 619 aa7.23□□□□□ -1.25
ATP7A-202ENST00000343533 LOC105371045A0A1W2PR82 267 aa7.22□□□□□ -1.25
ATP7A-202ENST00000343533 TRIM52Q96A61 297 aa7.21□□□□□ -1.26
ATP7A-202ENST00000343533 NEUROD1Q13562 356 aa7.2□□□□□ -1.26
ATP7A-202ENST00000343533 ZNF777Q9ULD5 760 aaPredicted RBP7.17□□□□□ -1.26
ATP7A-202ENST00000343533 CHGAP10645 457 aaKnown RBP7.16□□□□□ -1.26
ATP7A-202ENST00000343533 NEFLP07196 543 aa7.12□□□□□ -1.27
ATP7A-202ENST00000343533 CLSPNQ9HAW4 1339 aa7.11□□□□□ -1.27
ATP7A-202ENST00000343533 STAG3Q9UJ98 1225 aa7.09□□□□□ -1.27
ATP7A-202ENST00000343533 TRHP20396 242 aaPredicted RBP7.08□□□□□ -1.28
ATP7A-202ENST00000343533 ESF1Q9H501 851 aaKnown RBP7.08□□□□□ -1.28
ATP7A-202ENST00000343533 DAXXQ9UER7 740 aaPredicted RBP7.08□□□□□ -1.28
ATP7A-202ENST00000343533 TULP1O00294 542 aaPredicted RBP7.06□□□□□ -1.28
ATP7A-202ENST00000343533 SENP3-EIF4A1A0A087X0R7 540 aa7.06□□□□□ -1.28
ATP7A-202ENST00000343533 C14orf37Q86TY3 774 aa7.06□□□□□ -1.28
ATP7A-202ENST00000343533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.04□□□□□ -1.28
ATP7A-202ENST00000343533 ARXQ96QS3 562 aa7.02□□□□□ -1.29
ATP7A-202ENST00000343533 SALL2Q9Y467 1007 aaPredicted RBP7.02□□□□□ -1.29
ATP7A-202ENST00000343533 ARID4BQ4LE39 1312 aaPredicted RBP7.01□□□□□ -1.29
ATP7A-202ENST00000343533 CENPBP07199 599 aaPredicted RBP7□□□□□ -1.29
ATP7A-202ENST00000343533 TAOK2Q9UL54 1235 aa6.99□□□□□ -1.29
ATP7A-202ENST00000343533 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.97□□□□□ -1.29
ATP7A-202ENST00000343533 AMER1Q5JTC6 1135 aaPredicted RBP6.97□□□□□ -1.29
ATP7A-202ENST00000343533 NCBP3Q53F19 620 aaKnown RBP6.97□□□□□ -1.29
ATP7A-202ENST00000343533 TRIM26Q12899 539 aaPredicted RBP6.96□□□□□ -1.29
ATP7A-202ENST00000343533 KCNH8Q96L42 1107 aa6.96□□□□□ -1.29
ATP7A-202ENST00000343533 CANXP27824 592 aaKnown RBP6.95□□□□□ -1.3
ATP7A-202ENST00000343533 HAP1P54257 671 aaPredicted RBP6.95□□□□□ -1.3
ATP7A-202ENST00000343533 ZNF316A6NFI3 1004 aaPredicted RBP6.94□□□□□ -1.3
ATP7A-202ENST00000343533 LMOD2Q6P5Q4 547 aa6.94□□□□□ -1.3
ATP7A-202ENST00000343533 MLECQ14165 292 aa6.93□□□□□ -1.3
ATP7A-202ENST00000343533 CHIC2Q9UKJ5 165 aa6.92□□□□□ -1.3
ATP7A-202ENST00000343533 NPM1P06748 294 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATP7A-202ENST00000343533 TPRNQ4KMQ1 711 aa6.91□□□□□ -1.3
ATP7A-202ENST00000343533 ZBTB47Q9UFB7 747 aaPredicted RBP6.9□□□□□ -1.3
ATP7A-202ENST00000343533 KDM2AQ9Y2K7 1162 aa6.9□□□□□ -1.31
ATP7A-202ENST00000343533 NPM2Q86SE8 214 aaKnown RBP6.87□□□□□ -1.31
ATP7A-202ENST00000343533 SOX12O15370 315 aa6.87□□□□□ -1.31
ATP7A-202ENST00000343533 HIRIP3Q9BW71 556 aaPredicted RBP6.86□□□□□ -1.31
ATP7A-202ENST00000343533 AEBP2Q6ZN18 517 aaPredicted RBP6.84□□□□□ -1.31
ATP7A-202ENST00000343533 NPHP1O15259 732 aa6.84□□□□□ -1.31
ATP7A-202ENST00000343533 PPM1GO15355 546 aaPredicted RBP6.83□□□□□ -1.32
ATP7A-202ENST00000343533 NEFMP07197 916 aa6.82□□□□□ -1.32
ATP7A-202ENST00000343533 PPP1R15AO75807 674 aaPredicted RBP6.81□□□□□ -1.32
ATP7A-202ENST00000343533 CHMP7Q8WUX9 453 aaPredicted RBP6.79□□□□□ -1.32
ATP7A-202ENST00000343533 HRCP23327 699 aa6.78□□□□□ -1.32
ATP7A-202ENST00000343533 ANO8Q9HCE9 1232 aaPredicted RBP6.78□□□□□ -1.32
ATP7A-202ENST00000343533 ZEB1P37275 1124 aaPredicted RBP6.78□□□□□ -1.32
ATP7A-202ENST00000343533 PHF23Q9BUL5 403 aaPredicted RBP6.78□□□□□ -1.32
ATP7A-202ENST00000343533 SCRIBQ14160 1630 aa6.77□□□□□ -1.33
ATP7A-202ENST00000343533 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
ATP7A-202ENST00000343533 RGL3Q3MIN7 710 aa6.77□□□□□ -1.33
ATP7A-202ENST00000343533 TNNT2P45379 298 aaPredicted RBP6.76□□□□□ -1.33
ATP7A-202ENST00000343533 SAFB2Q14151 953 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATP7A-202ENST00000343533 TMC1Q8TDI8 760 aa6.75□□□□□ -1.33
ATP7A-202ENST00000343533 FAM9BQ8IZU0 186 aa6.75□□□□□ -1.33
ATP7A-202ENST00000343533 KLHL34Q8N239 644 aa6.75□□□□□ -1.33
ATP7A-202ENST00000343533 LAS1LQ9Y4W2 734 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms