RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
FCF1-201ENST00000341162 CCDC180Q9P1Z9 1646 aa14.02□□□□□ -0.16
FCF1-201ENST00000341162 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
FCF1-201ENST00000341162 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
FCF1-201ENST00000341162 MYO15BQ96JP2 1530 aa13.22□□□□□ -0.29
FCF1-201ENST00000341162 NACADO15069 1562 aa12.83□□□□□ -0.36
FCF1-201ENST00000341162 ABCC9O60706 1549 aa12.69□□□□□ -0.38
FCF1-201ENST00000341162 RB1CC1Q8TDY2 1594 aa12.57□□□□□ -0.4
FCF1-201ENST00000341162 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
FCF1-201ENST00000341162 SCRIBQ14160 1630 aa12.43□□□□□ -0.42
FCF1-201ENST00000341162 UNC13AQ9UPW8 1703 aa12.33□□□□□ -0.44
FCF1-201ENST00000341162 BAZ1AQ9NRL2 1556 aaPredicted RBP12.27□□□□□ -0.45
FCF1-201ENST00000341162 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
FCF1-201ENST00000341162 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
FCF1-201ENST00000341162 SMARCA4P51532 1647 aa12.16□□□□□ -0.46
FCF1-201ENST00000341162 EIF4G1Q04637 1599 aaKnown RBP12.14□□□□□ -0.47
FCF1-201ENST00000341162 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
FCF1-201ENST00000341162 TOP2AP11388 1531 aaKnown RBP12.12□□□□□ -0.47
FCF1-201ENST00000341162 BICRAQ9NZM4 1560 aa12.11□□□□□ -0.47
FCF1-201ENST00000341162 SUPT5HO00267 1087 aaKnown RBP12.09□□□□□ -0.47
FCF1-201ENST00000341162 MROH2BQ7Z745 1585 aa12.09□□□□□ -0.47
FCF1-201ENST00000341162 WIZO95785 1651 aa12.03□□□□□ -0.48
FCF1-201ENST00000341162 CHIC1Q5VXU3 224 aa12.02□□□□□ -0.48
FCF1-201ENST00000341162 CECR2Q9BXF3 1484 aa12.01□□□□□ -0.49
FCF1-201ENST00000341162 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
FCF1-201ENST00000341162 HMGXB3Q12766 1538 aa11.88□□□□□ -0.51
FCF1-201ENST00000341162 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
FCF1-201ENST00000341162 EEA1Q15075 1411 aa11.79□□□□□ -0.52
FCF1-201ENST00000341162 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
FCF1-201ENST00000341162 ATAD2BQ9ULI0 1458 aa11.77□□□□□ -0.53
FCF1-201ENST00000341162 NCAPD3P42695 1498 aa11.72□□□□□ -0.53
FCF1-201ENST00000341162 BAZ1BQ9UIG0 1483 aaKnown RBP11.69□□□□□ -0.54
FCF1-201ENST00000341162 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
FCF1-201ENST00000341162 KIF21BO75037 1637 aa11.63□□□□□ -0.55
FCF1-201ENST00000341162 TOP2BQ02880 1626 aa11.61□□□□□ -0.55
FCF1-201ENST00000341162 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
FCF1-201ENST00000341162 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
FCF1-201ENST00000341162 SYNJ1O43426 1573 aa11.51□□□□□ -0.57
FCF1-201ENST00000341162 CFTRP13569 1480 aa11.51□□□□□ -0.57
FCF1-201ENST00000341162 ERICH3Q5RHP9 1530 aa11.5□□□□□ -0.57
FCF1-201ENST00000341162 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
FCF1-201ENST00000341162 TNIKQ9UKE5 1360 aa11.47□□□□□ -0.57
FCF1-201ENST00000341162 GOLGA3Q08378 1498 aa11.46□□□□□ -0.57
FCF1-201ENST00000341162 CEP164Q9UPV0 1460 aa11.46□□□□□ -0.58
FCF1-201ENST00000341162 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
FCF1-201ENST00000341162 CC2D2AQ9P2K1 1620 aa11.38□□□□□ -0.59
FCF1-201ENST00000341162 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
FCF1-201ENST00000341162 LAMC3Q9Y6N6 1575 aa11.36□□□□□ -0.59
FCF1-201ENST00000341162 CUX1P39880 1505 aa11.35□□□□□ -0.59
FCF1-201ENST00000341162 PRXQ9BXM0 1461 aa11.32□□□□□ -0.6
FCF1-201ENST00000341162 HRCP23327 699 aa11.31□□□□□ -0.6
FCF1-201ENST00000341162 WDR97A6NE52 1622 aa11.31□□□□□ -0.6
FCF1-201ENST00000341162 DNMBPQ6XZF7 1577 aa11.31□□□□□ -0.6
FCF1-201ENST00000341162 CEP162Q5TB80 1403 aa11.31□□□□□ -0.6
FCF1-201ENST00000341162 SOGA1O94964 1423 aa11.3□□□□□ -0.6
FCF1-201ENST00000341162 CADPSQ9ULU8 1353 aa11.29□□□□□ -0.6
FCF1-201ENST00000341162 CSRNP3Q8WYN3 585 aa11.28□□□□□ -0.6
FCF1-201ENST00000341162 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
FCF1-201ENST00000341162 CUL7Q14999 1698 aa11.27□□□□□ -0.61
FCF1-201ENST00000341162 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
FCF1-201ENST00000341162 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
FCF1-201ENST00000341162 MAP3K1Q13233 1512 aa11.24□□□□□ -0.61
FCF1-201ENST00000341162 VPS8Q8N3P4 1428 aa11.2□□□□□ -0.62
FCF1-201ENST00000341162 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
FCF1-201ENST00000341162 ABCA10Q8WWZ4 1543 aa11.2□□□□□ -0.62
FCF1-201ENST00000341162 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
FCF1-201ENST00000341162 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
FCF1-201ENST00000341162 EFCAB5A4FU69 1503 aa11.16□□□□□ -0.62
FCF1-201ENST00000341162 ABCA5Q8WWZ7 1642 aa11.16□□□□□ -0.62
FCF1-201ENST00000341162 CTTNBP2Q8WZ74 1663 aa11.15□□□□□ -0.62
FCF1-201ENST00000341162 RAPGEF2Q9Y4G8 1499 aa11.15□□□□□ -0.63
FCF1-201ENST00000341162 CLIP1P30622 1438 aa11.14□□□□□ -0.63
FCF1-201ENST00000341162 FGD5Q6ZNL6 1462 aa11.13□□□□□ -0.63
FCF1-201ENST00000341162 TOPBP1Q92547 1522 aa11.12□□□□□ -0.63
FCF1-201ENST00000341162 CFAP43Q8NDM7 1665 aa11.12□□□□□ -0.63
FCF1-201ENST00000341162 PCGF6Q9BYE7 350 aa11.1□□□□□ -0.63
FCF1-201ENST00000341162 AQRO60306 1485 aaKnown RBP eCLIP11.1□□□□□ -0.63
FCF1-201ENST00000341162 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
FCF1-201ENST00000341162 ARAP1Q96P48 1450 aa11.09□□□□□ -0.63
FCF1-201ENST00000341162 PDS5BQ9NTI5 1447 aa11.08□□□□□ -0.64
FCF1-201ENST00000341162 POLA1P09884 1462 aaPredicted RBP11.05□□□□□ -0.64
FCF1-201ENST00000341162 TARBP1Q13395 1621 aaKnown RBP11.05□□□□□ -0.64
FCF1-201ENST00000341162 CUX2O14529 1486 aa11.04□□□□□ -0.64
FCF1-201ENST00000341162 SAMD9Q5K651 1589 aa11.04□□□□□ -0.64
FCF1-201ENST00000341162 FAM9AQ8IZU1 332 aaPredicted RBP11.03□□□□□ -0.64
FCF1-201ENST00000341162 PBRM1Q86U86 1689 aa11.02□□□□□ -0.64
FCF1-201ENST00000341162 IGF1RP08069 1367 aa11.02□□□□□ -0.64
FCF1-201ENST00000341162 URB2Q14146 1524 aaKnown RBP11.01□□□□□ -0.65
FCF1-201ENST00000341162 WDR62O43379 1518 aa11.01□□□□□ -0.65
FCF1-201ENST00000341162 ARHGAP35Q9NRY4 1499 aa11□□□□□ -0.65
FCF1-201ENST00000341162 FHAD1B1AJZ9 1412 aa11□□□□□ -0.65
FCF1-201ENST00000341162 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
FCF1-201ENST00000341162 RRBP1Q9P2E9 1410 aaKnown RBP10.99□□□□□ -0.65
FCF1-201ENST00000341162 FYCO1Q9BQS8 1478 aa10.99□□□□□ -0.65
FCF1-201ENST00000341162 MRC2Q9UBG0 1479 aa10.97□□□□□ -0.65
FCF1-201ENST00000341162 CARMIL1Q5VZK9 1371 aa10.96□□□□□ -0.66
FCF1-201ENST00000341162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.95□□□□□ -0.66
FCF1-201ENST00000341162 CLSPNQ9HAW4 1339 aa10.95□□□□□ -0.66
FCF1-201ENST00000341162 ADAMTS12P58397 1594 aa10.95□□□□□ -0.66
FCF1-201ENST00000341162 UBTFP17480 764 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms