RNA–Protein interactions for RNA: ENST00000286190.9

ALS2CR12-201, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ALS2CR12, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-201ENST00000286190 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
ALS2CR12-201ENST00000286190 CHIC1Q5VXU3 224 aa15.64■□□□□ 0.09
ALS2CR12-201ENST00000286190 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
ALS2CR12-201ENST00000286190 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
ALS2CR12-201ENST00000286190 SENP3Q9H4L4 574 aaPredicted RBP13.7□□□□□ -0.22
ALS2CR12-201ENST00000286190 FOXD1Q16676 465 aa12.76□□□□□ -0.37
ALS2CR12-201ENST00000286190 PLPPR3Q6T4P5 718 aa12.65□□□□□ -0.38
ALS2CR12-201ENST00000286190 MSH5O43196 834 aa12.36□□□□□ -0.43
ALS2CR12-201ENST00000286190 PPP6R1Q9UPN7 881 aa12.2□□□□□ -0.46
ALS2CR12-201ENST00000286190 ADRA2BP18089 450 aa12.2□□□□□ -0.46
ALS2CR12-201ENST00000286190 PIAS4Q8N2W9 510 aaPredicted RBP12.02□□□□□ -0.49
ALS2CR12-201ENST00000286190 EHMT2Q96KQ7 1210 aa11.59□□□□□ -0.55
ALS2CR12-201ENST00000286190 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
ALS2CR12-201ENST00000286190 POTEHQ6S545 545 aa11.33□□□□□ -0.59
ALS2CR12-201ENST00000286190 KCNA4P22459 653 aa11.25□□□□□ -0.61
ALS2CR12-201ENST00000286190 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
ALS2CR12-201ENST00000286190 MAPK8IP2Q13387 824 aaPredicted RBP11.11□□□□□ -0.63
ALS2CR12-201ENST00000286190 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
ALS2CR12-201ENST00000286190 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
ALS2CR12-201ENST00000286190 SLC24A1O60721 1099 aa10.94□□□□□ -0.66
ALS2CR12-201ENST00000286190 DMRT2Q9Y5R5 561 aa10.91□□□□□ -0.66
ALS2CR12-201ENST00000286190 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
ALS2CR12-201ENST00000286190 CNKSR2Q8WXI2 1034 aa10.85□□□□□ -0.67
ALS2CR12-201ENST00000286190 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
ALS2CR12-201ENST00000286190 NPM3O75607 178 aaKnown RBP10.67□□□□□ -0.7
ALS2CR12-201ENST00000286190 RNF216Q9NWF9 866 aaPredicted RBP10.65□□□□□ -0.7
ALS2CR12-201ENST00000286190 HOXD11P31277 338 aaPredicted RBP10.63□□□□□ -0.71
ALS2CR12-201ENST00000286190 RTN4Q9NQC3 1192 aaKnown RBP10.58□□□□□ -0.72
ALS2CR12-201ENST00000286190 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
ALS2CR12-201ENST00000286190 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
ALS2CR12-201ENST00000286190 ZBTB22O15209 634 aa10.39□□□□□ -0.75
ALS2CR12-201ENST00000286190 DNAJC5BQ9UF47 199 aa10.29□□□□□ -0.76
ALS2CR12-201ENST00000286190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.19□□□□□ -0.78
ALS2CR12-201ENST00000286190 RNF39Q9H2S5 420 aa10.16□□□□□ -0.78
ALS2CR12-201ENST00000286190 SLC4A2P04920 1241 aa10.11□□□□□ -0.79
ALS2CR12-201ENST00000286190 C1QBPQ07021 282 aaKnown RBP10.11□□□□□ -0.79
ALS2CR12-201ENST00000286190 PLSCR2Q9NRY7 297 aa10.07□□□□□ -0.8
ALS2CR12-201ENST00000286190 FOXD4L1Q9NU39 408 aa10.03□□□□□ -0.8
ALS2CR12-201ENST00000286190 U3KPZ7 1027 aaPredicted RBP9.99□□□□□ -0.81
ALS2CR12-201ENST00000286190 FKBP8Q14318 412 aa9.89□□□□□ -0.83
ALS2CR12-201ENST00000286190 MYCNP04198 464 aaPredicted RBP9.86□□□□□ -0.83
ALS2CR12-201ENST00000286190 SP7Q8TDD2 431 aaPredicted RBP9.82□□□□□ -0.84
ALS2CR12-201ENST00000286190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.79□□□□□ -0.84
ALS2CR12-201ENST00000286190 HNRNPUL2Q1KMD3 747 aaKnown RBP9.79□□□□□ -0.84
ALS2CR12-201ENST00000286190 SPINK5Q9NQ38 1064 aaPredicted RBP9.78□□□□□ -0.84
ALS2CR12-201ENST00000286190 SAMD1Q6SPF0 538 aaPredicted RBP9.76□□□□□ -0.85
ALS2CR12-201ENST00000286190 CAPN15O75808 1086 aa9.75□□□□□ -0.85
ALS2CR12-201ENST00000286190 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
ALS2CR12-201ENST00000286190 ATXN8OSP0DMR3 200 aa9.7□□□□□ -0.86
ALS2CR12-201ENST00000286190 APLP2Q06481 763 aa9.7□□□□□ -0.86
ALS2CR12-201ENST00000286190 TRHP20396 242 aaPredicted RBP9.68□□□□□ -0.86
ALS2CR12-201ENST00000286190 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
ALS2CR12-201ENST00000286190 ATF5Q9Y2D1 282 aaPredicted RBP9.63□□□□□ -0.87
ALS2CR12-201ENST00000286190 ZNF219Q9P2Y4 722 aaPredicted RBP9.62□□□□□ -0.87
ALS2CR12-201ENST00000286190 ABCB7O75027 752 aa9.57□□□□□ -0.88
ALS2CR12-201ENST00000286190 DSG3P32926 999 aa9.57□□□□□ -0.88
ALS2CR12-201ENST00000286190 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
ALS2CR12-201ENST00000286190 BCANQ96GW7 911 aa9.54□□□□□ -0.88
ALS2CR12-201ENST00000286190 TAOK2Q9UL54 1235 aa9.54□□□□□ -0.88
ALS2CR12-201ENST00000286190 POLA2Q14181 598 aa9.48□□□□□ -0.89
ALS2CR12-201ENST00000286190 TPRNQ4KMQ1 711 aa9.41□□□□□ -0.9
ALS2CR12-201ENST00000286190 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
ALS2CR12-201ENST00000286190 VSIG10Q8N0Z9 540 aa9.33□□□□□ -0.92
ALS2CR12-201ENST00000286190 ZBTB12Q9Y330 459 aaPredicted RBP9.26□□□□□ -0.93
ALS2CR12-201ENST00000286190 KDM2AQ9Y2K7 1162 aa9.25□□□□□ -0.93
ALS2CR12-201ENST00000286190 TIMELESSQ9UNS1 1208 aa9.24□□□□□ -0.93
ALS2CR12-201ENST00000286190 FBLN2P98095 1184 aa9.22□□□□□ -0.93
ALS2CR12-201ENST00000286190 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
ALS2CR12-201ENST00000286190 DAXXQ9UER7 740 aaPredicted RBP9.19□□□□□ -0.94
ALS2CR12-201ENST00000286190 FBXO3Q9UK99 471 aa9.18□□□□□ -0.94
ALS2CR12-201ENST00000286190 TULP1O00294 542 aaPredicted RBP9.17□□□□□ -0.94
ALS2CR12-201ENST00000286190 LHX8Q68G74 356 aa9.17□□□□□ -0.94
ALS2CR12-201ENST00000286190 OSCARQ8IYS5 282 aa9.17□□□□□ -0.94
ALS2CR12-201ENST00000286190 PKD2Q13563 968 aa9.12□□□□□ -0.95
ALS2CR12-201ENST00000286190 VASPP50552 380 aaPredicted RBP9.11□□□□□ -0.95
ALS2CR12-201ENST00000286190 CHRDL2Q6WN34 429 aa9.11□□□□□ -0.95
ALS2CR12-201ENST00000286190 IFNLR1Q8IU57 520 aaPredicted RBP9.1□□□□□ -0.95
ALS2CR12-201ENST00000286190 RBM42Q9BTD8 480 aaKnown RBP9.1□□□□□ -0.95
ALS2CR12-201ENST00000286190 PAXIP1Q6ZW49 1069 aaPredicted RBP9.07□□□□□ -0.96
ALS2CR12-201ENST00000286190 ARXQ96QS3 562 aa9.07□□□□□ -0.96
ALS2CR12-201ENST00000286190 CFAP44Q96MT7 982 aa9.06□□□□□ -0.96
ALS2CR12-201ENST00000286190 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.06□□□□□ -0.96
ALS2CR12-201ENST00000286190 PCDH10Q9P2E7 1040 aa9.04□□□□□ -0.96
ALS2CR12-201ENST00000286190 GTF3C3Q9Y5Q9 886 aa9.04□□□□□ -0.96
ALS2CR12-201ENST00000286190 SPDYE4A6NLX3 237 aa9.03□□□□□ -0.96
ALS2CR12-201ENST00000286190 NPM1P06748 294 aaKnown RBP eCLIP9.03□□□□□ -0.96
ALS2CR12-201ENST00000286190 BBXQ8WY36 941 aaPredicted RBP9.03□□□□□ -0.96
ALS2CR12-201ENST00000286190 SPDYE2BA6NHP3 402 aa9.01□□□□□ -0.97
ALS2CR12-201ENST00000286190 SPDYE6P0CI01 402 aa9.01□□□□□ -0.97
ALS2CR12-201ENST00000286190 SPDYE2Q495Y8 402 aa9.01□□□□□ -0.97
ALS2CR12-201ENST00000286190 ZNF692Q9BU19 519 aaPredicted RBP9□□□□□ -0.97
ALS2CR12-201ENST00000286190 TSHZ2Q9NRE2 1034 aa8.99□□□□□ -0.97
ALS2CR12-201ENST00000286190 AKT1S1Q96B36 256 aa8.97□□□□□ -0.97
ALS2CR12-201ENST00000286190 PROM2Q8N271 834 aa8.94□□□□□ -0.98
ALS2CR12-201ENST00000286190 SSUH2Q9Y2M2 353 aa8.92□□□□□ -0.98
ALS2CR12-201ENST00000286190 REM2Q8IYK8 340 aaPredicted RBP8.91□□□□□ -0.98
ALS2CR12-201ENST00000286190 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
ALS2CR12-201ENST00000286190 NBR1Q14596 966 aa8.89□□□□□ -0.99
ALS2CR12-201ENST00000286190 SPRYD3Q8NCJ5 442 aa8.89□□□□□ -0.99
ALS2CR12-201ENST00000286190 PABPN1Q86U42 306 aaKnown RBP eCLIP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms