RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 KHSRPQ92945 711 aaKnown RBP eCLIP11.89□□□□□ -0.511e-19■■■■□ 21.5
GSE1-201ENST00000253458 YBX3P16989 372 aaKnown RBP eCLIP13.22□□□□□ -0.299e-14■□□□□ 10.4
GSE1-201ENST00000253458 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.32□□□□□ -0.441e-13■■■■■ 164.5
GSE1-201ENST00000253458 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.121e-12■■■■■ 35.3
GSE1-201ENST00000253458 CPSF6Q16630 551 aaKnown RBP eCLIP13.07□□□□□ -0.322e-12■■■■□ 25.7
GSE1-201ENST00000253458 PUS1Q9Y606 427 aaKnown RBP eCLIP12.22□□□□□ -0.454e-12■■■■■ 30
GSE1-201ENST00000253458 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.42□□□□□ -0.428e-12■■■□□ 18.1
GSE1-201ENST00000253458 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.34e-11■■■■□ 24.5
GSE1-201ENST00000253458 SRSF1Q07955 248 aaKnown RBP eCLIP10.6□□□□□ -0.714e-11■■■□□ 18.6
GSE1-201ENST00000253458 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.356e-10■■■□□ 17.1
GSE1-201ENST00000253458 PCBP1Q15365 356 aaKnown RBP eCLIP12.62□□□□□ -0.392e-9■■■■□ 26.7
GSE1-201ENST00000253458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.472e-9■■□□□ 11.9
GSE1-201ENST00000253458 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.15■□□□□ 0.023e-9■■□□□ 14.2
GSE1-201ENST00000253458 EWSR1Q01844 656 aaKnown RBP eCLIP11.13□□□□□ -0.637e-9■■■■■ 34.3
GSE1-201ENST00000253458 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.92□□□□□ -0.182e-8■■■■□ 24.9
GSE1-201ENST00000253458 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.5□□□□□ -0.094e-8■■□□□ 13.7
GSE1-201ENST00000253458 NPM1P06748 294 aaKnown RBP eCLIP17.79■□□□□ 0.445e-8■■■■■ 57.5
GSE1-201ENST00000253458 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.53□□□□□ -0.085e-8■■■□□ 17.1
GSE1-201ENST00000253458 EIF3HO15372 352 aaKnown RBP eCLIP13.06□□□□□ -0.326e-8■■■■□ 26.3
GSE1-201ENST00000253458 PPIGQ13427 754 aaKnown RBP eCLIP12.9□□□□□ -0.357e-8■■□□□ 12.4
GSE1-201ENST00000253458 FMR1Q06787 632 aaKnown RBP eCLIP13.43□□□□□ -0.268e-8■■□□□ 14.1
GSE1-201ENST00000253458 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.98□□□□□ -0.651e-7■■■□□ 15.1
GSE1-201ENST00000253458 TARDBPQ13148 414 aaKnown RBP eCLIP12.7□□□□□ -0.381e-7■■■□□ 16.8
GSE1-201ENST00000253458 AQRO60306 1485 aaKnown RBP eCLIP15.41■□□□□ 0.061e-7■■■■■ 31.5
GSE1-201ENST00000253458 XRCC6P12956 609 aaKnown RBP eCLIP14.4□□□□□ -0.11e-7■■■■□ 19.5
GSE1-201ENST00000253458 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.52□□□□□ -0.41e-7■■□□□ 11.6
GSE1-201ENST00000253458 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.29□□□□□ -0.122e-7■■■■■ 30.3
GSE1-201ENST00000253458 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■■□□□ 13.1
GSE1-201ENST00000253458 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.342e-7■□□□□ 9.6
GSE1-201ENST00000253458 PCBP2Q15366 365 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■■■■■ 38
GSE1-201ENST00000253458 PUM1Q14671 1186 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■□□□ 14.4
GSE1-201ENST00000253458 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.132e-7■■□□□ 14
GSE1-201ENST00000253458 EFTUD2Q15029 972 aaKnown RBP eCLIP13.65□□□□□ -0.223e-7■■■□□ 18.9
GSE1-201ENST00000253458 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.233e-7■□□□□ 9.6
GSE1-201ENST00000253458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.243e-7■■□□□ 14.3
GSE1-201ENST00000253458 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.86□□□□□ -0.354e-7■■■■□ 20.3
GSE1-201ENST00000253458 NONOQ15233 471 aaKnown RBP eCLIP14.3□□□□□ -0.124e-7■■■■□ 23
GSE1-201ENST00000253458 SF3B4Q15427 424 aaKnown RBP eCLIP12.04□□□□□ -0.484e-7■■■■□ 23.4
GSE1-201ENST00000253458 GTF2F1P35269 517 aaKnown RBP eCLIP14.66□□□□□ -0.064e-7■■■■□ 22
GSE1-201ENST00000253458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.064e-7■■■■■ 77
GSE1-201ENST00000253458 SF3A3Q12874 501 aaKnown RBP eCLIP14.74□□□□□ -0.054e-7■■■■■ 29.3
GSE1-201ENST00000253458 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.49□□□□□ -0.255e-7■■■□□ 17.8
GSE1-201ENST00000253458 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.9□□□□□ -0.355e-7■■■■□ 25.2
GSE1-201ENST00000253458 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.93■□□□□ 0.145e-7■■■■■ 105.5
GSE1-201ENST00000253458 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.39□□□□□ -0.276e-7■■■□□ 19.2
GSE1-201ENST00000253458 ZNF622Q969S3 477 aaKnown RBP eCLIP15.38■□□□□ 0.056e-7■□□□□ 10.2
GSE1-201ENST00000253458 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.06□□□□□ -0.326e-7■□□□□ 10.5
GSE1-201ENST00000253458 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.36■□□□□ 0.056e-7■■□□□ 14.3
GSE1-201ENST00000253458 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.357e-7■■■■■ 91.9
GSE1-201ENST00000253458 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.63□□□□□ -0.237e-7■■■■□ 19.7
GSE1-201ENST00000253458 RBFOX2O43251 390 aaKnown RBP eCLIP11.16□□□□□ -0.627e-7■■■■■ 55.6
GSE1-201ENST00000253458 LSM11P83369 360 aaKnown RBP eCLIP11.5□□□□□ -0.577e-7■■■■□ 21.2
GSE1-201ENST00000253458 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.8□□□□□ -0.367e-7■■■□□ 18.2
GSE1-201ENST00000253458 FTOQ9C0B1 505 aaKnown RBP eCLIP14.31□□□□□ -0.127e-7■■■□□ 18.9
GSE1-201ENST00000253458 RBM22Q9NW64 420 aaKnown RBP eCLIP13.31□□□□□ -0.288e-7■■■■□ 21.2
GSE1-201ENST00000253458 AGGF1Q8N302 714 aaeCLIP13.04□□□□□ -0.328e-7■■■□□ 15.3
GSE1-201ENST00000253458 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.228e-7■■■■■ 30.9
GSE1-201ENST00000253458 YWHAGP61981 247 aaKnown RBP eCLIP14.13□□□□□ -0.158e-7■■□□□ 12
GSE1-201ENST00000253458 TIA1P31483 386 aaKnown RBP eCLIP12.25□□□□□ -0.458e-7■■■□□ 14.8
GSE1-201ENST00000253458 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.16■□□□□ 0.028e-7■■■□□ 18.9
GSE1-201ENST00000253458 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.96□□□□□ -0.349e-7■■■■□ 20.2
GSE1-201ENST00000253458 PTBP1P26599 531 aaKnown RBP eCLIP11.5□□□□□ -0.579e-7■■■■□ 20.2
GSE1-201ENST00000253458 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.41□□□□□ -0.269e-7■■■□□ 18.9
GSE1-201ENST00000253458 FUBP3Q96I24 572 aaKnown RBP eCLIP12.44□□□□□ -0.429e-7■■■■□ 24.3
GSE1-201ENST00000253458 FUSP35637 526 aaKnown RBP eCLIP10.2□□□□□ -0.789e-7■■■□□ 17.1
GSE1-201ENST00000253458 SMNDC1O75940 238 aaKnown RBP eCLIP13.45□□□□□ -0.269e-7■■■■□ 26.7
GSE1-201ENST00000253458 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■■□□ 15.3
GSE1-201ENST00000253458 NKRFO15226 690 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■■□□ 15.3
GSE1-201ENST00000253458 EIF4G2P78344 907 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■■■□□ 15
GSE1-201ENST00000253458 EIF3DO15371 548 aaKnown RBP eCLIP13.23□□□□□ -0.291e-6■■□□□ 12
GSE1-201ENST00000253458 SFPQP23246 707 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■■■□□ 16.1
GSE1-201ENST00000253458 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■■■□□ 17.5
GSE1-201ENST00000253458 TAF15Q92804 592 aaKnown RBP eCLIP10.91□□□□□ -0.661e-6■■□□□ 14.3
GSE1-201ENST00000253458 FKBP4Q02790 459 aaKnown RBP eCLIP15.6■□□□□ 0.091e-6■■■■□ 23.5
GSE1-201ENST00000253458 SF3B1O75533 1304 aaKnown RBP eCLIP13.08□□□□□ -0.321e-6■■■■■ 65.9
GSE1-201ENST00000253458 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■■□□□ 12.7
GSE1-201ENST00000253458 LARP4Q71RC2 724 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■□□□ 13.9
GSE1-201ENST00000253458 HNRNPKP61978 463 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■■■■□ 24.6
GSE1-201ENST00000253458 ZC3H11AO75152 810 aaKnown RBP eCLIP13.7□□□□□ -0.221e-6■■□□□ 13.2
GSE1-201ENST00000253458 TRA2AQ13595 282 aaKnown RBP eCLIP11.42□□□□□ -0.581e-6■□□□□ 8.4
GSE1-201ENST00000253458 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■■□□ 15.5
GSE1-201ENST00000253458 METAP2P50579 478 aaKnown RBP eCLIP14.89□□□□□ -0.031e-6■■■□□ 16.5
GSE1-201ENST00000253458 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■■■■ 49.4
GSE1-201ENST00000253458 ZRANB2O95218 330 aaKnown RBP eCLIP14.52□□□□□ -0.092e-6■■■□□ 16.9
GSE1-201ENST00000253458 AARSP49588 968 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■■■■□ 23.9
GSE1-201ENST00000253458 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.2□□□□□ -0.142e-6■■■□□ 14.9
GSE1-201ENST00000253458 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.45□□□□□ -0.422e-6■■■■■ 27.6
GSE1-201ENST00000253458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.41□□□□□ -0.262e-6■■■■□ 21.7
GSE1-201ENST00000253458 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.212e-6■■■□□ 16.3
GSE1-201ENST00000253458 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.86□□□□□ -0.512e-6■■■■□ 23.1
GSE1-201ENST00000253458 NOLC1Q14978 699 aaKnown RBP eCLIP14.32□□□□□ -0.122e-6■■□□□ 12.3
GSE1-201ENST00000253458 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.352e-6■■■■□ 23.7
GSE1-201ENST00000253458 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.64□□□□□ -0.552e-6■■■□□ 18.9
GSE1-201ENST00000253458 RBM5P52756 815 aaKnown RBP eCLIP15.86■□□□□ 0.132e-6■■■■□ 19.3
GSE1-201ENST00000253458 NCBP2P52298 156 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■■■ 27.5
GSE1-201ENST00000253458 NIPBLQ6KC79 2804 aaeCLIP6.85□□□□□ -1.313e-6■■■□□ 17
GSE1-201ENST00000253458 GPKOWQ92917 476 aaPredicted RBP eCLIP14.4□□□□□ -0.13e-6■□□□□ 10.9
GSE1-201ENST00000253458 PRPF4O43172 522 aaKnown RBP eCLIP13.94□□□□□ -0.183e-6■■■■□ 20
GSE1-201ENST00000253458 AATFQ9NY61 560 aaKnown RBP eCLIP14.69□□□□□ -0.063e-6■■■□□ 16.8
GSE1-201ENST00000253458 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.193e-6■■■■□ 26.6
Retrieved 100 of 110 RNA–protein pairs in 18.1 ms