RNA–Protein interactions for RNA: ENST00000246006.4

CD93-201, Transcript of CD93 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD93, Length 6,708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD93-201ENST00000246006 DCAF8L2P0C7V8 631 aa25.42■■□□□ 1.66
CD93-201ENST00000246006 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.44
CD93-201ENST00000246006 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
CD93-201ENST00000246006 TTBK1Q5TCY1 1321 aaPredicted RBP23.16■■□□□ 1.3
CD93-201ENST00000246006 PELP1Q8IZL8 1130 aaKnown RBP23.08■■□□□ 1.28
CD93-201ENST00000246006 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
CD93-201ENST00000246006 RANGAP1P46060 587 aaPredicted RBP22.83■■□□□ 1.25
CD93-201ENST00000246006 APLP2Q06481 763 aa22.78■■□□□ 1.24
CD93-201ENST00000246006 ERICH6Q7L0X2 663 aa22.73■■□□□ 1.23
CD93-201ENST00000246006 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
CD93-201ENST00000246006 ATP1B4Q9UN42 357 aaPredicted RBP22.6■■□□□ 1.21
CD93-201ENST00000246006 PCGF6Q9BYE7 350 aa22.32■■□□□ 1.16
CD93-201ENST00000246006 MYT1Q01538 1121 aa22.3■■□□□ 1.16
CD93-201ENST00000246006 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
CD93-201ENST00000246006 YTHDC1Q96MU7 727 aaKnown RBP22.11■■□□□ 1.13
CD93-201ENST00000246006 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
CD93-201ENST00000246006 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
CD93-201ENST00000246006 CNGB1Q14028 1251 aaPredicted RBP21.92■■□□□ 1.1
CD93-201ENST00000246006 POLR3GLQ9BT43 218 aa21.89■■□□□ 1.09
CD93-201ENST00000246006 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
CD93-201ENST00000246006 NEFLP07196 543 aa21.77■■□□□ 1.08
CD93-201ENST00000246006 PPARGC1BQ86YN6 1023 aaKnown RBP21.77■■□□□ 1.07
CD93-201ENST00000246006 SLC4A1APQ9BWU0 796 aaKnown RBP21.67■■□□□ 1.06
CD93-201ENST00000246006 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
CD93-201ENST00000246006 DAXXQ9UER7 740 aaPredicted RBP21.62■■□□□ 1.05
CD93-201ENST00000246006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
CD93-201ENST00000246006 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
CD93-201ENST00000246006 ITGAEP38570 1179 aa21.51■■□□□ 1.03
CD93-201ENST00000246006 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
CD93-201ENST00000246006 BCL11AQ9H165 835 aa21.27■■□□□ 1
CD93-201ENST00000246006 CLSPNQ9HAW4 1339 aa21.16■□□□□ 0.98
CD93-201ENST00000246006 SLC24A1O60721 1099 aa21.15■□□□□ 0.98
CD93-201ENST00000246006 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
CD93-201ENST00000246006 ZNF316A6NFI3 1004 aaPredicted RBP21.11■□□□□ 0.97
CD93-201ENST00000246006 NISCHQ9Y2I1 1504 aa20.96■□□□□ 0.95
CD93-201ENST00000246006 BCANQ96GW7 911 aa20.79■□□□□ 0.92
CD93-201ENST00000246006 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
CD93-201ENST00000246006 RTL5Q5HYW3 569 aaPredicted RBP20.78■□□□□ 0.92
CD93-201ENST00000246006 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
CD93-201ENST00000246006 TRIM52Q96A61 297 aa20.65■□□□□ 0.9
CD93-201ENST00000246006 ZBTB47Q9UFB7 747 aaPredicted RBP20.64■□□□□ 0.9
CD93-201ENST00000246006 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
CD93-201ENST00000246006 NEUROD1Q13562 356 aa20.6■□□□□ 0.89
CD93-201ENST00000246006 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
CD93-201ENST00000246006 FBLN2P98095 1184 aa20.46■□□□□ 0.87
CD93-201ENST00000246006 LOC105371045A0A1W2PR82 267 aa20.45■□□□□ 0.86
CD93-201ENST00000246006 HRCP23327 699 aa20.45■□□□□ 0.86
CD93-201ENST00000246006 TRIM26Q12899 539 aaPredicted RBP20.44■□□□□ 0.86
CD93-201ENST00000246006 ARID3CA6NKF2 412 aa20.41■□□□□ 0.86
CD93-201ENST00000246006 A0A0G2JS52 829 aa20.3■□□□□ 0.84
CD93-201ENST00000246006 NPM2Q86SE8 214 aaKnown RBP20.29■□□□□ 0.84
CD93-201ENST00000246006 PLEKHG5O94827 1062 aa20.27■□□□□ 0.84
CD93-201ENST00000246006 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
CD93-201ENST00000246006 NEFMP07197 916 aa20.2■□□□□ 0.82
CD93-201ENST00000246006 DIEXFQ68CQ4 756 aaKnown RBP20.2■□□□□ 0.82
CD93-201ENST00000246006 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
CD93-201ENST00000246006 CDK11AQ9UQ88 783 aaPredicted RBP20.13■□□□□ 0.81
CD93-201ENST00000246006 ARXQ96QS3 562 aa20.1■□□□□ 0.81
CD93-201ENST00000246006 CHGAP10645 457 aaKnown RBP20.08■□□□□ 0.81
CD93-201ENST00000246006 TULP1O00294 542 aaPredicted RBP20.07■□□□□ 0.8
CD93-201ENST00000246006 ANP32CO43423 234 aa20.07■□□□□ 0.8
CD93-201ENST00000246006 ZNF777Q9ULD5 760 aaPredicted RBP20.06■□□□□ 0.8
CD93-201ENST00000246006 EIF5BO60841 1220 aaKnown RBP20.05■□□□□ 0.8
CD93-201ENST00000246006 ZBTB7CA1YPR0 619 aa20.05■□□□□ 0.8
CD93-201ENST00000246006 STAG3Q9UJ98 1225 aa20.03■□□□□ 0.8
CD93-201ENST00000246006 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
CD93-201ENST00000246006 ESF1Q9H501 851 aaKnown RBP20.03■□□□□ 0.8
CD93-201ENST00000246006 HSP90AA1P07900 732 aaKnown RBP20.01■□□□□ 0.79
CD93-201ENST00000246006 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
CD93-201ENST00000246006 SALL2Q9Y467 1007 aaPredicted RBP19.98■□□□□ 0.79
CD93-201ENST00000246006 GTF3C3Q9Y5Q9 886 aa19.92■□□□□ 0.78
CD93-201ENST00000246006 ANP32BQ92688 251 aaKnown RBP19.85■□□□□ 0.77
CD93-201ENST00000246006 ANP32AP39687 249 aaKnown RBP19.84■□□□□ 0.77
CD93-201ENST00000246006 NCBP3Q53F19 620 aaKnown RBP19.81■□□□□ 0.76
CD93-201ENST00000246006 CDK11BP21127 795 aaKnown RBP19.8■□□□□ 0.76
CD93-201ENST00000246006 TPRNQ4KMQ1 711 aa19.8■□□□□ 0.76
CD93-201ENST00000246006 C14orf37Q86TY3 774 aa19.76■□□□□ 0.75
CD93-201ENST00000246006 TAOK2Q9UL54 1235 aa19.75■□□□□ 0.75
CD93-201ENST00000246006 NBR1Q14596 966 aa19.7■□□□□ 0.74
CD93-201ENST00000246006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.69■□□□□ 0.74
CD93-201ENST00000246006 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
CD93-201ENST00000246006 UPF2Q9HAU5 1272 aaKnown RBP19.59■□□□□ 0.73
CD93-201ENST00000246006 FKBP8Q14318 412 aa19.57■□□□□ 0.72
CD93-201ENST00000246006 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
CD93-201ENST00000246006 HAP1P54257 671 aaPredicted RBP19.55■□□□□ 0.72
CD93-201ENST00000246006 KDM2AQ9Y2K7 1162 aa19.5■□□□□ 0.71
CD93-201ENST00000246006 IRX6P78412 446 aaPredicted RBP19.47■□□□□ 0.71
CD93-201ENST00000246006 NPM1P06748 294 aaKnown RBP eCLIP19.45■□□□□ 0.7
CD93-201ENST00000246006 HNRNPUQ00839 825 aaKnown RBP eCLIP19.45■□□□□ 0.7
CD93-201ENST00000246006 NPHP1O15259 732 aa19.44■□□□□ 0.7
CD93-201ENST00000246006 CHIC2Q9UKJ5 165 aa19.43■□□□□ 0.7
CD93-201ENST00000246006 ABCC9O60706 1549 aa19.41■□□□□ 0.7
CD93-201ENST00000246006 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
CD93-201ENST00000246006 NCLP19338 710 aaKnown RBP19.37■□□□□ 0.69
CD93-201ENST00000246006 CLSTN1O94985 981 aa19.37■□□□□ 0.69
CD93-201ENST00000246006 MYH16Q9H6N6 1097 aa19.35■□□□□ 0.69
CD93-201ENST00000246006 DDX10Q13206 875 aaKnown RBP19.33■□□□□ 0.68
CD93-201ENST00000246006 LMOD2Q6P5Q4 547 aa19.33■□□□□ 0.68
CD93-201ENST00000246006 AMER1Q5JTC6 1135 aaPredicted RBP19.32■□□□□ 0.68
CD93-201ENST00000246006 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms