RNA–Protein interactions for RNA: ENSMUST00000218686.1

Trappc6b-207, Transcript of Trafficking protein particle complex subunit 6B, mousemouse

TSL 3 BASIC

Gene Trappc6b, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6b-207ENSMUST00000218686 Gm35339A0A140LHH9 1649 aa51.53■■■■■ 5.84
Trappc6b-207ENSMUST00000218686 NischQ80TM9 1593 aa50.27■■■■■ 5.64
Trappc6b-207ENSMUST00000218686 Abcc9P70170 1546 aa49.43■■■■■ 5.5
Trappc6b-207ENSMUST00000218686 Abcc8B2RUS7 1588 aa48.98■■■■■ 5.43
Trappc6b-207ENSMUST00000218686 ScribQ80U72 1612 aa48.14■■■■■ 5.3
Trappc6b-207ENSMUST00000218686 NacadQ5SWP3 1504 aa46.26■■■■■ 5
Trappc6b-207ENSMUST00000218686 Kdm5dQ62240 1548 aa46.17■■■■■ 4.98
Trappc6b-207ENSMUST00000218686 Dnajc5bQ9CQ94 199 aa45.91■■■■■ 4.94
Trappc6b-207ENSMUST00000218686 Sycp2Q9CUU3 1500 aa45.47■■■■■ 4.87
Trappc6b-207ENSMUST00000218686 BicraF8VPZ9 1578 aa45.16■■■■■ 4.82
Trappc6b-207ENSMUST00000218686 Dcaf1Q80TR8 1506 aa44.78■■■■■ 4.76
Trappc6b-207ENSMUST00000218686 Thoc2B1AZI6 1594 aaKnown RBP44.24■■■■■ 4.67
Trappc6b-207ENSMUST00000218686 Pds5bQ4VA53 1446 aaKnown RBP43.97■■■■■ 4.63
Trappc6b-207ENSMUST00000218686 Rb1cc1Q9ESK9 1588 aa43.74■■■■■ 4.59
Trappc6b-207ENSMUST00000218686 Cc2d2aQ8CFW7 1633 aa43.48■■■■■ 4.55
Trappc6b-207ENSMUST00000218686 Atad2bE9Q166 1460 aaKnown RBP43.32■■■■■ 4.53
Trappc6b-207ENSMUST00000218686 Ercc6F8VPZ5 1481 aa43.04■■■■■ 4.48
Trappc6b-207ENSMUST00000218686 Baz1aO88379 1555 aa42.96■■■■■ 4.47
Trappc6b-207ENSMUST00000218686 Fam135aQ6NS59 1506 aa42.92■■■■■ 4.46
Trappc6b-207ENSMUST00000218686 Crybg2B7ZCC2 1516 aa42.87■■■■■ 4.45
Trappc6b-207ENSMUST00000218686 Smarca2Q6DIC0 1577 aa42.74■■■■■ 4.43
Trappc6b-207ENSMUST00000218686 Ccdc180J3QNE4 1664 aa42.68■■■■■ 4.42
Trappc6b-207ENSMUST00000218686 Dnajc5P60904 198 aa42.68■■■■■ 4.42
Trappc6b-207ENSMUST00000218686 Zcchc6Q5BLK4 1491 aaKnown RBP42.62■■■■■ 4.41
Trappc6b-207ENSMUST00000218686 Smarca4Q3TKT4 1613 aaKnown RBP42.5■■■■■ 4.39
Trappc6b-207ENSMUST00000218686 Iqgap2Q3UQ44 1575 aa42.5■■■■■ 4.39
Trappc6b-207ENSMUST00000218686 Wdr62Q3U3T8 1523 aa42.33■■■■■ 4.37
Trappc6b-207ENSMUST00000218686 Frmpd1A2AKB4 1549 aa42.29■■■■■ 4.36
Trappc6b-207ENSMUST00000218686 Phldb1Q6PDH0 1371 aaKnown RBP42.25■■■■■ 4.35
Trappc6b-207ENSMUST00000218686 Baz1bQ9Z277 1479 aa42.16■■■■■ 4.34
Trappc6b-207ENSMUST00000218686 Rhox8Q6VSS7 320 aa42.13■■■■■ 4.33
Trappc6b-207ENSMUST00000218686 Cecr2E9Q2Z1 1453 aa42.11■■■■■ 4.33
Trappc6b-207ENSMUST00000218686 Trim41Q5NCC3 630 aa42.08■■■■■ 4.33
Trappc6b-207ENSMUST00000218686 Ubl4bQ9CQ84 188 aa41.95■■■■■ 4.31
Trappc6b-207ENSMUST00000218686 Mrc2Q64449 1479 aa41.89■■■■■ 4.3
Trappc6b-207ENSMUST00000218686 Unc13aQ4KUS2 1712 aa41.79■■■■■ 4.28
Trappc6b-207ENSMUST00000218686 Lrriq1Q0P5X1 1673 aa41.17■■■■■ 4.18
Trappc6b-207ENSMUST00000218686 Rsf1E9PWW9 1441 aaKnown RBP40.89■■■■■ 4.14
Trappc6b-207ENSMUST00000218686 CftrP26361 1476 aa40.81■■■■■ 4.12
Trappc6b-207ENSMUST00000218686 Cttnbp2B9EJA2 1648 aa40.8■■■■■ 4.12
Trappc6b-207ENSMUST00000218686 Shroom2A2ALU4 1481 aa40.7■■■■■ 4.11
Trappc6b-207ENSMUST00000218686 Kif21aQ9QXL2 1672 aa40.67■■■■■ 4.1
Trappc6b-207ENSMUST00000218686 Synj1Q8CHC4 1574 aa40.66■■■■■ 4.1
Trappc6b-207ENSMUST00000218686 Cux2P70298 1426 aa40.59■■■■■ 4.09
Trappc6b-207ENSMUST00000218686 Eif4g3Q80XI3 1579 aaKnown RBP40.52■■■■■ 4.08
Trappc6b-207ENSMUST00000218686 Col17a1Q07563 1470 aa40.47■■■■■ 4.07
Trappc6b-207ENSMUST00000218686 Kif15Q6P9L6 1387 aa40.31■■■■■ 4.04
Trappc6b-207ENSMUST00000218686 Brd4Q9ESU6 1400 aaKnown RBP40.24■■■■■ 4.03
Trappc6b-207ENSMUST00000218686 Top2bQ64511 1612 aa40.03■■■■■ 4
Trappc6b-207ENSMUST00000218686 Pabpn1Q8CCS6 302 aaKnown RBP40.02■■■■■ 4
Trappc6b-207ENSMUST00000218686 Npm1Q61937 292 aaKnown RBP39.97■■■■□ 3.99
Trappc6b-207ENSMUST00000218686 Esf1Q3V1V3 845 aaKnown RBP39.94■■■■□ 3.98
Trappc6b-207ENSMUST00000218686 Urb2E9Q7L1 1524 aaKnown RBP39.93■■■■□ 3.98
Trappc6b-207ENSMUST00000218686 Lamc3Q9R0B6 1581 aa39.91■■■■□ 3.98
Trappc6b-207ENSMUST00000218686 Rtl1Q7M732 1744 aa39.81■■■■□ 3.96
Trappc6b-207ENSMUST00000218686 Plb1Q3TTY0 1478 aa39.79■■■■□ 3.96
Trappc6b-207ENSMUST00000218686 Cep164Q5DU05 1446 aa39.76■■■■□ 3.96
Trappc6b-207ENSMUST00000218686 Ccdc136Q3TVA9 1136 aa39.73■■■■□ 3.95
Trappc6b-207ENSMUST00000218686 Pelp1Q9DBD5 1123 aaKnown RBP39.71■■■■□ 3.95
Trappc6b-207ENSMUST00000218686 Dhx29Q6PGC1 1365 aaKnown RBP39.63■■■■□ 3.93
Trappc6b-207ENSMUST00000218686 Zcchc11B2RX14 1644 aaKnown RBP39.63■■■■□ 3.93
Trappc6b-207ENSMUST00000218686 Pcdh10E9PXQ7 1057 aa39.49■■■■□ 3.91
Trappc6b-207ENSMUST00000218686 Rusc2Q80U22 1514 aa39.49■■■■□ 3.91
Trappc6b-207ENSMUST00000218686 Crocc2F6XLV1 1638 aa39.45■■■■□ 3.91
Trappc6b-207ENSMUST00000218686 Il27Q8K3I6 234 aa39.36■■■■□ 3.89
Trappc6b-207ENSMUST00000218686 LrpprcQ6PB66 1392 aaKnown RBP39.3■■■■□ 3.88
Trappc6b-207ENSMUST00000218686 Ift140E9PY46 1464 aa39.26■■■■□ 3.88
Trappc6b-207ENSMUST00000218686 Ccdc18Q640L5 1455 aa39.25■■■■□ 3.87
Trappc6b-207ENSMUST00000218686 Arhgef5E9Q7D5 1581 aa39.23■■■■□ 3.87
Trappc6b-207ENSMUST00000218686 TnnQ80Z71 1560 aa39.1■■■■□ 3.85
Trappc6b-207ENSMUST00000218686 Camsap1A2AHC3 1581 aa39.09■■■■□ 3.85
Trappc6b-207ENSMUST00000218686 Adgrl3Q80TS3 1537 aa39.06■■■■□ 3.84
Trappc6b-207ENSMUST00000218686 PogzQ8BZH4 1409 aaKnown RBP38.98■■■■□ 3.83
Trappc6b-207ENSMUST00000218686 Ttbk1Q6PCN3 1308 aa38.95■■■■□ 3.83
Trappc6b-207ENSMUST00000218686 Disp1Q3TDN0 1521 aa38.87■■■■□ 3.81
Trappc6b-207ENSMUST00000218686 Setd1bQ8CFT2 1985 aa38.86■■■■□ 3.81
Trappc6b-207ENSMUST00000218686 PtprkP35822 1457 aa38.82■■■■□ 3.81
Trappc6b-207ENSMUST00000218686 Cep170Q6A065 1588 aa38.82■■■■□ 3.8
Trappc6b-207ENSMUST00000218686 Duox2A2AQ99 1517 aa38.79■■■■□ 3.8
Trappc6b-207ENSMUST00000218686 PtprtQ99M80 1454 aa38.77■■■■□ 3.8
Trappc6b-207ENSMUST00000218686 Gm156Q58A37 223 aa38.73■■■■□ 3.79
Trappc6b-207ENSMUST00000218686 Golga3P55937 1487 aa38.7■■■■□ 3.79
Trappc6b-207ENSMUST00000218686 Nup160Q9Z0W3 1402 aaKnown RBP38.7■■■■□ 3.79
Trappc6b-207ENSMUST00000218686 Gapvd1Q6PAR5 1458 aa38.69■■■■□ 3.78
Trappc6b-207ENSMUST00000218686 Cc2d2bA0A286YDU8 1405 aa38.65■■■■□ 3.78
Trappc6b-207ENSMUST00000218686 Pbrm1Q8BSQ9 1634 aaKnown RBP38.61■■■■□ 3.77
Trappc6b-207ENSMUST00000218686 Samd9lQ69Z37 1561 aa38.56■■■■□ 3.76
Trappc6b-207ENSMUST00000218686 Fgd6Q69ZL1 1399 aa38.47■■■■□ 3.75
Trappc6b-207ENSMUST00000218686 Pprc1Q6NZN1 1644 aa38.46■■■■□ 3.75
Trappc6b-207ENSMUST00000218686 Grin2bQ01097 1482 aa38.4■■■■□ 3.74
Trappc6b-207ENSMUST00000218686 AqrQ8CFQ3 1481 aaKnown RBP38.37■■■■□ 3.73
Trappc6b-207ENSMUST00000218686 Cngb1E1AZ71 1325 aa38.32■■■■□ 3.72
Trappc6b-207ENSMUST00000218686 Rad54l2Q99NG0 1466 aa38.31■■■■□ 3.72
Trappc6b-207ENSMUST00000218686 Abcc1O35379 1528 aa38.27■■■■□ 3.72
Trappc6b-207ENSMUST00000218686 Grin2aP35436 1464 aa38.26■■■■□ 3.72
Trappc6b-207ENSMUST00000218686 AknaQ80VW7 1404 aa38.24■■■■□ 3.71
Trappc6b-207ENSMUST00000218686 Fmn1Q05860 1466 aa38.23■■■■□ 3.71
Trappc6b-207ENSMUST00000218686 Rapgef2Q8CHG7 1496 aa38.23■■■■□ 3.71
Trappc6b-207ENSMUST00000218686 Magi3Q9EQJ9 1476 aa38.22■■■■□ 3.71
Trappc6b-207ENSMUST00000218686 Ythdc2B2RR83 1445 aaKnown RBP38.22■■■■□ 3.71
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms