RNA–Protein interactions for RNA: ENSMUST00000204020.1

3300002P13Rik-201, mousemouse

TSL 1 (best) BASIC

Gene 3300002P13Rik, Length 1,092 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
3300002P13Rik-201ENSMUST00000204020 Gm35339A0A140LHH9 1649 aa28.22■■■□□ 2.11
3300002P13Rik-201ENSMUST00000204020 NischQ80TM9 1593 aa27.36■■□□□ 1.97
3300002P13Rik-201ENSMUST00000204020 Abcc9P70170 1546 aa27.35■■□□□ 1.97
3300002P13Rik-201ENSMUST00000204020 Abcc8B2RUS7 1588 aa26.8■■□□□ 1.88
3300002P13Rik-201ENSMUST00000204020 ScribQ80U72 1612 aa26.55■■□□□ 1.84
3300002P13Rik-201ENSMUST00000204020 Dnajc5bQ9CQ94 199 aa25.85■■□□□ 1.73
3300002P13Rik-201ENSMUST00000204020 NacadQ5SWP3 1504 aa25.39■■□□□ 1.66
3300002P13Rik-201ENSMUST00000204020 Kdm5dQ62240 1548 aa25.34■■□□□ 1.65
3300002P13Rik-201ENSMUST00000204020 Sycp2Q9CUU3 1500 aa25■■□□□ 1.59
3300002P13Rik-201ENSMUST00000204020 BicraF8VPZ9 1578 aa24.93■■□□□ 1.58
3300002P13Rik-201ENSMUST00000204020 Thoc2B1AZI6 1594 aaKnown RBP24.57■■□□□ 1.52
3300002P13Rik-201ENSMUST00000204020 Dcaf1Q80TR8 1506 aa24.42■■□□□ 1.5
3300002P13Rik-201ENSMUST00000204020 Dnajc5P60904 198 aa24.25■■□□□ 1.47
3300002P13Rik-201ENSMUST00000204020 Pds5bQ4VA53 1446 aaKnown RBP24.24■■□□□ 1.47
3300002P13Rik-201ENSMUST00000204020 Cc2d2aQ8CFW7 1633 aa24.11■■□□□ 1.45
3300002P13Rik-201ENSMUST00000204020 Atad2bE9Q166 1460 aaKnown RBP23.84■■□□□ 1.41
3300002P13Rik-201ENSMUST00000204020 Rb1cc1Q9ESK9 1588 aa23.75■■□□□ 1.39
3300002P13Rik-201ENSMUST00000204020 Fam135aQ6NS59 1506 aa23.74■■□□□ 1.39
3300002P13Rik-201ENSMUST00000204020 Ercc6F8VPZ5 1481 aa23.67■■□□□ 1.38
3300002P13Rik-201ENSMUST00000204020 Trim41Q5NCC3 630 aa23.57■■□□□ 1.36
3300002P13Rik-201ENSMUST00000204020 Smarca2Q6DIC0 1577 aa23.49■■□□□ 1.35
3300002P13Rik-201ENSMUST00000204020 Crybg2B7ZCC2 1516 aa23.34■■□□□ 1.33
3300002P13Rik-201ENSMUST00000204020 Baz1aO88379 1555 aa23.32■■□□□ 1.32
3300002P13Rik-201ENSMUST00000204020 Iqgap2Q3UQ44 1575 aa23.31■■□□□ 1.32
3300002P13Rik-201ENSMUST00000204020 Frmpd1A2AKB4 1549 aa23.29■■□□□ 1.32
3300002P13Rik-201ENSMUST00000204020 Wdr62Q3U3T8 1523 aa23.29■■□□□ 1.32
3300002P13Rik-201ENSMUST00000204020 Phldb1Q6PDH0 1371 aaKnown RBP23.28■■□□□ 1.32
3300002P13Rik-201ENSMUST00000204020 Smarca4Q3TKT4 1613 aaKnown RBP23.26■■□□□ 1.31
3300002P13Rik-201ENSMUST00000204020 Baz1bQ9Z277 1479 aa23.25■■□□□ 1.31
3300002P13Rik-201ENSMUST00000204020 Zcchc6Q5BLK4 1491 aaKnown RBP23.15■■□□□ 1.3
3300002P13Rik-201ENSMUST00000204020 Mrc2Q64449 1479 aa23.15■■□□□ 1.3
3300002P13Rik-201ENSMUST00000204020 Ubl4bQ9CQ84 188 aa23.12■■□□□ 1.29
3300002P13Rik-201ENSMUST00000204020 Ccdc180J3QNE4 1664 aa23.12■■□□□ 1.29
3300002P13Rik-201ENSMUST00000204020 Cecr2E9Q2Z1 1453 aa23.03■■□□□ 1.28
3300002P13Rik-201ENSMUST00000204020 Unc13aQ4KUS2 1712 aa23.01■■□□□ 1.27
3300002P13Rik-201ENSMUST00000204020 Lrriq1Q0P5X1 1673 aa22.81■■□□□ 1.24
3300002P13Rik-201ENSMUST00000204020 Shroom2A2ALU4 1481 aa22.71■■□□□ 1.23
3300002P13Rik-201ENSMUST00000204020 Col17a1Q07563 1470 aa22.66■■□□□ 1.22
3300002P13Rik-201ENSMUST00000204020 Rsf1E9PWW9 1441 aaKnown RBP22.64■■□□□ 1.21
3300002P13Rik-201ENSMUST00000204020 Rhox8Q6VSS7 320 aa22.5■■□□□ 1.19
3300002P13Rik-201ENSMUST00000204020 Kif21aQ9QXL2 1672 aa22.41■■□□□ 1.18
3300002P13Rik-201ENSMUST00000204020 Eif4g3Q80XI3 1579 aaKnown RBP22.41■■□□□ 1.18
3300002P13Rik-201ENSMUST00000204020 Cux2P70298 1426 aa22.26■■□□□ 1.15
3300002P13Rik-201ENSMUST00000204020 Top2bQ64511 1612 aa22.24■■□□□ 1.15
3300002P13Rik-201ENSMUST00000204020 Pabpn1Q8CCS6 302 aaKnown RBP22.22■■□□□ 1.15
3300002P13Rik-201ENSMUST00000204020 Pcdh10E9PXQ7 1057 aa22.21■■□□□ 1.15
3300002P13Rik-201ENSMUST00000204020 CftrP26361 1476 aa22.21■■□□□ 1.15
3300002P13Rik-201ENSMUST00000204020 Cttnbp2B9EJA2 1648 aa22.17■■□□□ 1.14
3300002P13Rik-201ENSMUST00000204020 Synj1Q8CHC4 1574 aa22.1■■□□□ 1.13
3300002P13Rik-201ENSMUST00000204020 Zcchc11B2RX14 1644 aaKnown RBP22.06■■□□□ 1.12
3300002P13Rik-201ENSMUST00000204020 Kif15Q6P9L6 1387 aa22.01■■□□□ 1.11
3300002P13Rik-201ENSMUST00000204020 Urb2E9Q7L1 1524 aaKnown RBP22■■□□□ 1.11
3300002P13Rik-201ENSMUST00000204020 Pelp1Q9DBD5 1123 aaKnown RBP21.96■■□□□ 1.11
3300002P13Rik-201ENSMUST00000204020 Plb1Q3TTY0 1478 aa21.93■■□□□ 1.1
3300002P13Rik-201ENSMUST00000204020 Arhgef5E9Q7D5 1581 aa21.88■■□□□ 1.09
3300002P13Rik-201ENSMUST00000204020 Npm1Q61937 292 aaKnown RBP21.85■■□□□ 1.09
3300002P13Rik-201ENSMUST00000204020 Lamc3Q9R0B6 1581 aa21.78■■□□□ 1.08
3300002P13Rik-201ENSMUST00000204020 Rusc2Q80U22 1514 aa21.75■■□□□ 1.07
3300002P13Rik-201ENSMUST00000204020 Brd4Q9ESU6 1400 aaKnown RBP21.73■■□□□ 1.07
3300002P13Rik-201ENSMUST00000204020 Cep164Q5DU05 1446 aa21.72■■□□□ 1.07
3300002P13Rik-201ENSMUST00000204020 Dhx29Q6PGC1 1365 aaKnown RBP21.71■■□□□ 1.07
3300002P13Rik-201ENSMUST00000204020 Adgrl3Q80TS3 1537 aa21.67■■□□□ 1.06
3300002P13Rik-201ENSMUST00000204020 Crocc2F6XLV1 1638 aa21.6■■□□□ 1.05
3300002P13Rik-201ENSMUST00000204020 Esf1Q3V1V3 845 aaKnown RBP21.6■■□□□ 1.05
3300002P13Rik-201ENSMUST00000204020 Ttbk1Q6PCN3 1308 aa21.56■■□□□ 1.04
3300002P13Rik-201ENSMUST00000204020 Mapk8ip2Q9ERE9 830 aa21.55■■□□□ 1.04
3300002P13Rik-201ENSMUST00000204020 PtprtQ99M80 1454 aa21.55■■□□□ 1.04
3300002P13Rik-201ENSMUST00000204020 Ift140E9PY46 1464 aa21.53■■□□□ 1.04
3300002P13Rik-201ENSMUST00000204020 Gm156Q58A37 223 aa21.49■■□□□ 1.03
3300002P13Rik-201ENSMUST00000204020 LrpprcQ6PB66 1392 aaKnown RBP21.48■■□□□ 1.03
3300002P13Rik-201ENSMUST00000204020 Cep170Q6A065 1588 aa21.48■■□□□ 1.03
3300002P13Rik-201ENSMUST00000204020 PtprkP35822 1457 aa21.47■■□□□ 1.03
3300002P13Rik-201ENSMUST00000204020 Il27Q8K3I6 234 aa21.43■■□□□ 1.02
3300002P13Rik-201ENSMUST00000204020 Gapvd1Q6PAR5 1458 aa21.38■■□□□ 1.01
3300002P13Rik-201ENSMUST00000204020 Pprc1Q6NZN1 1644 aa21.37■■□□□ 1.01
3300002P13Rik-201ENSMUST00000204020 Setd1bQ8CFT2 1985 aa21.37■■□□□ 1.01
3300002P13Rik-201ENSMUST00000204020 Ccdc18Q640L5 1455 aa21.35■■□□□ 1.01
3300002P13Rik-201ENSMUST00000204020 Ccdc136Q3TVA9 1136 aa21.35■■□□□ 1.01
3300002P13Rik-201ENSMUST00000204020 Disp1Q3TDN0 1521 aa21.34■■□□□ 1.01
3300002P13Rik-201ENSMUST00000204020 PogzQ8BZH4 1409 aaKnown RBP21.29■■□□□ 1
3300002P13Rik-201ENSMUST00000204020 Camsap1A2AHC3 1581 aa21.29■■□□□ 1
3300002P13Rik-201ENSMUST00000204020 TnnQ80Z71 1560 aa21.27■□□□□ 0.99
3300002P13Rik-201ENSMUST00000204020 Nup160Q9Z0W3 1402 aaKnown RBP21.23■□□□□ 0.99
3300002P13Rik-201ENSMUST00000204020 Rtl1Q7M732 1744 aa21.22■□□□□ 0.99
3300002P13Rik-201ENSMUST00000204020 Plekhg3Q4VAC9 1341 aa21.22■□□□□ 0.99
3300002P13Rik-201ENSMUST00000204020 Duox2A2AQ99 1517 aa21.19■□□□□ 0.98
3300002P13Rik-201ENSMUST00000204020 Cc2d2bA0A286YDU8 1405 aa21.18■□□□□ 0.98
3300002P13Rik-201ENSMUST00000204020 Golga3P55937 1487 aa21.17■□□□□ 0.98
3300002P13Rik-201ENSMUST00000204020 Rapgef2Q8CHG7 1496 aa21.14■□□□□ 0.98
3300002P13Rik-201ENSMUST00000204020 Fgd6Q69ZL1 1399 aa21.13■□□□□ 0.97
3300002P13Rik-201ENSMUST00000204020 Pbrm1Q8BSQ9 1634 aaKnown RBP21.11■□□□□ 0.97
3300002P13Rik-201ENSMUST00000204020 Ythdc2B2RR83 1445 aaKnown RBP21.09■□□□□ 0.97
3300002P13Rik-201ENSMUST00000204020 Samd9lQ69Z37 1561 aa21.07■□□□□ 0.96
3300002P13Rik-201ENSMUST00000204020 Setbp1Q9Z180 1582 aa21.06■□□□□ 0.96
3300002P13Rik-201ENSMUST00000204020 Abcc1O35379 1528 aa21.06■□□□□ 0.96
3300002P13Rik-201ENSMUST00000204020 AqrQ8CFQ3 1481 aaKnown RBP21.02■□□□□ 0.96
3300002P13Rik-201ENSMUST00000204020 Chd1P40201 1711 aa20.99■□□□□ 0.95
3300002P13Rik-201ENSMUST00000204020 AknaQ80VW7 1404 aa20.98■□□□□ 0.95
3300002P13Rik-201ENSMUST00000204020 Ppp1r18Q8BQ30 594 aa20.95■□□□□ 0.94
3300002P13Rik-201ENSMUST00000204020 Rad54l2Q99NG0 1466 aa20.94■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms