RNA–Protein interactions for RNA: ENSMUST00000185651.1

Trav1-202, Transcript of T cell receptor alpha variable 1 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav1, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1-202ENSMUST00000185651 Gm35339A0A140LHH9 1649 aa16.51■□□□□ 0.23
Trav1-202ENSMUST00000185651 Abcc9P70170 1546 aa16.1■□□□□ 0.17
Trav1-202ENSMUST00000185651 NischQ80TM9 1593 aa16.04■□□□□ 0.16
Trav1-202ENSMUST00000185651 Abcc8B2RUS7 1588 aa15.66■□□□□ 0.1
Trav1-202ENSMUST00000185651 ScribQ80U72 1612 aa15.55■□□□□ 0.08
Trav1-202ENSMUST00000185651 Dnajc5bQ9CQ94 199 aa15.17■□□□□ 0.02
Trav1-202ENSMUST00000185651 NacadQ5SWP3 1504 aa14.87□□□□□ -0.03
Trav1-202ENSMUST00000185651 Kdm5dQ62240 1548 aa14.86□□□□□ -0.03
Trav1-202ENSMUST00000185651 Sycp2Q9CUU3 1500 aa14.63□□□□□ -0.07
Trav1-202ENSMUST00000185651 BicraF8VPZ9 1578 aa14.6□□□□□ -0.07
Trav1-202ENSMUST00000185651 Thoc2B1AZI6 1594 aaKnown RBP14.4□□□□□ -0.1
Trav1-202ENSMUST00000185651 Dcaf1Q80TR8 1506 aa14.26□□□□□ -0.13
Trav1-202ENSMUST00000185651 Dnajc5P60904 198 aa14.23□□□□□ -0.13
Trav1-202ENSMUST00000185651 Pds5bQ4VA53 1446 aaKnown RBP14.2□□□□□ -0.14
Trav1-202ENSMUST00000185651 Cc2d2aQ8CFW7 1633 aa14.17□□□□□ -0.14
Trav1-202ENSMUST00000185651 Trim41Q5NCC3 630 aa13.97□□□□□ -0.17
Trav1-202ENSMUST00000185651 Atad2bE9Q166 1460 aaKnown RBP13.96□□□□□ -0.17
Trav1-202ENSMUST00000185651 Rb1cc1Q9ESK9 1588 aa13.96□□□□□ -0.18
Trav1-202ENSMUST00000185651 Ercc6F8VPZ5 1481 aa13.93□□□□□ -0.18
Trav1-202ENSMUST00000185651 Fam135aQ6NS59 1506 aa13.91□□□□□ -0.18
Trav1-202ENSMUST00000185651 Smarca2Q6DIC0 1577 aa13.78□□□□□ -0.2
Trav1-202ENSMUST00000185651 Iqgap2Q3UQ44 1575 aa13.68□□□□□ -0.22
Trav1-202ENSMUST00000185651 Baz1aO88379 1555 aa13.66□□□□□ -0.22
Trav1-202ENSMUST00000185651 Smarca4Q3TKT4 1613 aaKnown RBP13.65□□□□□ -0.22
Trav1-202ENSMUST00000185651 Phldb1Q6PDH0 1371 aaKnown RBP13.65□□□□□ -0.22
Trav1-202ENSMUST00000185651 Wdr62Q3U3T8 1523 aa13.64□□□□□ -0.23
Trav1-202ENSMUST00000185651 Frmpd1A2AKB4 1549 aa13.64□□□□□ -0.23
Trav1-202ENSMUST00000185651 Zcchc6Q5BLK4 1491 aaKnown RBP13.62□□□□□ -0.23
Trav1-202ENSMUST00000185651 Ubl4bQ9CQ84 188 aa13.6□□□□□ -0.23
Trav1-202ENSMUST00000185651 Crybg2B7ZCC2 1516 aa13.59□□□□□ -0.23
Trav1-202ENSMUST00000185651 Mrc2Q64449 1479 aa13.59□□□□□ -0.23
Trav1-202ENSMUST00000185651 Baz1bQ9Z277 1479 aa13.58□□□□□ -0.24
Trav1-202ENSMUST00000185651 Unc13aQ4KUS2 1712 aa13.54□□□□□ -0.24
Trav1-202ENSMUST00000185651 Ccdc180J3QNE4 1664 aa13.52□□□□□ -0.25
Trav1-202ENSMUST00000185651 Cecr2E9Q2Z1 1453 aa13.48□□□□□ -0.25
Trav1-202ENSMUST00000185651 Lrriq1Q0P5X1 1673 aa13.41□□□□□ -0.26
Trav1-202ENSMUST00000185651 Shroom2A2ALU4 1481 aa13.3□□□□□ -0.28
Trav1-202ENSMUST00000185651 Rhox8Q6VSS7 320 aa13.3□□□□□ -0.28
Trav1-202ENSMUST00000185651 Col17a1Q07563 1470 aa13.29□□□□□ -0.28
Trav1-202ENSMUST00000185651 Rsf1E9PWW9 1441 aaKnown RBP13.28□□□□□ -0.28
Trav1-202ENSMUST00000185651 Kif21aQ9QXL2 1672 aa13.18□□□□□ -0.3
Trav1-202ENSMUST00000185651 Eif4g3Q80XI3 1579 aaKnown RBP13.17□□□□□ -0.3
Trav1-202ENSMUST00000185651 Top2bQ64511 1612 aa13.1□□□□□ -0.31
Trav1-202ENSMUST00000185651 Pabpn1Q8CCS6 302 aaKnown RBP13.08□□□□□ -0.32
Trav1-202ENSMUST00000185651 Cux2P70298 1426 aa13.07□□□□□ -0.32
Trav1-202ENSMUST00000185651 Pcdh10E9PXQ7 1057 aa13.06□□□□□ -0.32
Trav1-202ENSMUST00000185651 Cttnbp2B9EJA2 1648 aa13.02□□□□□ -0.33
Trav1-202ENSMUST00000185651 Pelp1Q9DBD5 1123 aaKnown RBP13.01□□□□□ -0.33
Trav1-202ENSMUST00000185651 CftrP26361 1476 aa13□□□□□ -0.33
Trav1-202ENSMUST00000185651 Synj1Q8CHC4 1574 aa12.97□□□□□ -0.33
Trav1-202ENSMUST00000185651 Kif15Q6P9L6 1387 aa12.94□□□□□ -0.34
Trav1-202ENSMUST00000185651 Zcchc11B2RX14 1644 aaKnown RBP12.94□□□□□ -0.34
Trav1-202ENSMUST00000185651 Urb2E9Q7L1 1524 aaKnown RBP12.91□□□□□ -0.34
Trav1-202ENSMUST00000185651 Arhgef5E9Q7D5 1581 aa12.89□□□□□ -0.35
Trav1-202ENSMUST00000185651 Plb1Q3TTY0 1478 aa12.88□□□□□ -0.35
Trav1-202ENSMUST00000185651 Npm1Q61937 292 aaKnown RBP12.86□□□□□ -0.35
Trav1-202ENSMUST00000185651 Ttbk1Q6PCN3 1308 aa12.8□□□□□ -0.36
Trav1-202ENSMUST00000185651 Cep164Q5DU05 1446 aa12.77□□□□□ -0.37
Trav1-202ENSMUST00000185651 Rusc2Q80U22 1514 aa12.77□□□□□ -0.37
Trav1-202ENSMUST00000185651 Esf1Q3V1V3 845 aaKnown RBP12.76□□□□□ -0.37
Trav1-202ENSMUST00000185651 Lamc3Q9R0B6 1581 aa12.76□□□□□ -0.37
Trav1-202ENSMUST00000185651 Dhx29Q6PGC1 1365 aaKnown RBP12.75□□□□□ -0.37
Trav1-202ENSMUST00000185651 Adgrl3Q80TS3 1537 aa12.74□□□□□ -0.37
Trav1-202ENSMUST00000185651 Brd4Q9ESU6 1400 aaKnown RBP12.74□□□□□ -0.37
Trav1-202ENSMUST00000185651 Crocc2F6XLV1 1638 aa12.7□□□□□ -0.38
Trav1-202ENSMUST00000185651 Il27Q8K3I6 234 aa12.67□□□□□ -0.38
Trav1-202ENSMUST00000185651 PtprtQ99M80 1454 aa12.65□□□□□ -0.38
Trav1-202ENSMUST00000185651 Cep170Q6A065 1588 aa12.64□□□□□ -0.39
Trav1-202ENSMUST00000185651 Ift140E9PY46 1464 aa12.63□□□□□ -0.39
Trav1-202ENSMUST00000185651 PtprkP35822 1457 aa12.62□□□□□ -0.39
Trav1-202ENSMUST00000185651 Gm156Q58A37 223 aa12.61□□□□□ -0.39
Trav1-202ENSMUST00000185651 Setd1bQ8CFT2 1985 aa12.6□□□□□ -0.39
Trav1-202ENSMUST00000185651 LrpprcQ6PB66 1392 aaKnown RBP12.59□□□□□ -0.39
Trav1-202ENSMUST00000185651 Ccdc136Q3TVA9 1136 aa12.59□□□□□ -0.39
Trav1-202ENSMUST00000185651 Gapvd1Q6PAR5 1458 aa12.57□□□□□ -0.4
Trav1-202ENSMUST00000185651 Plekhg3Q4VAC9 1341 aa12.56□□□□□ -0.4
Trav1-202ENSMUST00000185651 Ccdc18Q640L5 1455 aa12.55□□□□□ -0.4
Trav1-202ENSMUST00000185651 Rtl1Q7M732 1744 aa12.54□□□□□ -0.4
Trav1-202ENSMUST00000185651 Pprc1Q6NZN1 1644 aa12.54□□□□□ -0.4
Trav1-202ENSMUST00000185651 Camsap1A2AHC3 1581 aa12.49□□□□□ -0.41
Trav1-202ENSMUST00000185651 Disp1Q3TDN0 1521 aa12.49□□□□□ -0.41
Trav1-202ENSMUST00000185651 PogzQ8BZH4 1409 aaKnown RBP12.47□□□□□ -0.41
Trav1-202ENSMUST00000185651 TnnQ80Z71 1560 aa12.44□□□□□ -0.42
Trav1-202ENSMUST00000185651 Nup160Q9Z0W3 1402 aaKnown RBP12.43□□□□□ -0.42
Trav1-202ENSMUST00000185651 Duox2A2AQ99 1517 aa12.42□□□□□ -0.42
Trav1-202ENSMUST00000185651 Cc2d2bA0A286YDU8 1405 aa12.42□□□□□ -0.42
Trav1-202ENSMUST00000185651 Golga3P55937 1487 aa12.41□□□□□ -0.42
Trav1-202ENSMUST00000185651 Fgd6Q69ZL1 1399 aa12.41□□□□□ -0.42
Trav1-202ENSMUST00000185651 Rapgef2Q8CHG7 1496 aa12.4□□□□□ -0.42
Trav1-202ENSMUST00000185651 Pbrm1Q8BSQ9 1634 aaKnown RBP12.4□□□□□ -0.42
Trav1-202ENSMUST00000185651 Ppp1r18Q8BQ30 594 aa12.38□□□□□ -0.43
Trav1-202ENSMUST00000185651 Samd9lQ69Z37 1561 aa12.38□□□□□ -0.43
Trav1-202ENSMUST00000185651 Ythdc2B2RR83 1445 aaKnown RBP12.37□□□□□ -0.43
Trav1-202ENSMUST00000185651 AknaQ80VW7 1404 aa12.37□□□□□ -0.43
Trav1-202ENSMUST00000185651 Abcc1O35379 1528 aa12.37□□□□□ -0.43
Trav1-202ENSMUST00000185651 Chd1P40201 1711 aa12.37□□□□□ -0.43
Trav1-202ENSMUST00000185651 Ak9G3UYQ4 1894 aa12.35□□□□□ -0.43
Trav1-202ENSMUST00000185651 Setbp1Q9Z180 1582 aa12.35□□□□□ -0.43
Trav1-202ENSMUST00000185651 AqrQ8CFQ3 1481 aaKnown RBP12.33□□□□□ -0.44
Trav1-202ENSMUST00000185651 Top2aQ01320 1528 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms