RNA–Protein interactions for RNA: ENSMUST00000184650.1

Trav6-4-202, Transcript of T cell receptor alpha variable 6-4 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav6-4, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4-202ENSMUST00000184650 Gm35339A0A140LHH9 1649 aa13.95□□□□□ -0.18
Trav6-4-202ENSMUST00000184650 Abcc9P70170 1546 aa13.69□□□□□ -0.22
Trav6-4-202ENSMUST00000184650 NischQ80TM9 1593 aa13.62□□□□□ -0.23
Trav6-4-202ENSMUST00000184650 Abcc8B2RUS7 1588 aa13.35□□□□□ -0.27
Trav6-4-202ENSMUST00000184650 ScribQ80U72 1612 aa13.17□□□□□ -0.3
Trav6-4-202ENSMUST00000184650 Dnajc5bQ9CQ94 199 aa13.06□□□□□ -0.32
Trav6-4-202ENSMUST00000184650 NacadQ5SWP3 1504 aa12.68□□□□□ -0.38
Trav6-4-202ENSMUST00000184650 Kdm5dQ62240 1548 aa12.61□□□□□ -0.39
Trav6-4-202ENSMUST00000184650 Sycp2Q9CUU3 1500 aa12.48□□□□□ -0.41
Trav6-4-202ENSMUST00000184650 BicraF8VPZ9 1578 aa12.42□□□□□ -0.42
Trav6-4-202ENSMUST00000184650 Dnajc5P60904 198 aa12.29□□□□□ -0.44
Trav6-4-202ENSMUST00000184650 Thoc2B1AZI6 1594 aaKnown RBP12.22□□□□□ -0.45
Trav6-4-202ENSMUST00000184650 Pds5bQ4VA53 1446 aaKnown RBP12.16□□□□□ -0.46
Trav6-4-202ENSMUST00000184650 Dcaf1Q80TR8 1506 aa12.11□□□□□ -0.47
Trav6-4-202ENSMUST00000184650 Cc2d2aQ8CFW7 1633 aa12.02□□□□□ -0.49
Trav6-4-202ENSMUST00000184650 Atad2bE9Q166 1460 aaKnown RBP11.94□□□□□ -0.5
Trav6-4-202ENSMUST00000184650 Trim41Q5NCC3 630 aa11.91□□□□□ -0.5
Trav6-4-202ENSMUST00000184650 Fam135aQ6NS59 1506 aa11.82□□□□□ -0.52
Trav6-4-202ENSMUST00000184650 Ercc6F8VPZ5 1481 aa11.82□□□□□ -0.52
Trav6-4-202ENSMUST00000184650 Chic1Q8CBW7 227 aa11.81□□□□□ -0.52
Trav6-4-202ENSMUST00000184650 Rb1cc1Q9ESK9 1588 aa11.77□□□□□ -0.53
Trav6-4-202ENSMUST00000184650 Smarca2Q6DIC0 1577 aa11.72□□□□□ -0.53
Trav6-4-202ENSMUST00000184650 Phldb1Q6PDH0 1371 aaKnown RBP11.7□□□□□ -0.54
Trav6-4-202ENSMUST00000184650 Ubl4bQ9CQ84 188 aa11.69□□□□□ -0.54
Trav6-4-202ENSMUST00000184650 Crybg2B7ZCC2 1516 aa11.67□□□□□ -0.54
Trav6-4-202ENSMUST00000184650 Frmpd1A2AKB4 1549 aa11.64□□□□□ -0.55
Trav6-4-202ENSMUST00000184650 Baz1bQ9Z277 1479 aa11.62□□□□□ -0.55
Trav6-4-202ENSMUST00000184650 Wdr62Q3U3T8 1523 aa11.6□□□□□ -0.55
Trav6-4-202ENSMUST00000184650 Baz1aO88379 1555 aa11.58□□□□□ -0.55
Trav6-4-202ENSMUST00000184650 Iqgap2Q3UQ44 1575 aa11.58□□□□□ -0.55
Trav6-4-202ENSMUST00000184650 Mrc2Q64449 1479 aa11.57□□□□□ -0.56
Trav6-4-202ENSMUST00000184650 Smarca4Q3TKT4 1613 aaKnown RBP11.57□□□□□ -0.56
Trav6-4-202ENSMUST00000184650 Mapk8ip2Q9ERE9 830 aa11.56□□□□□ -0.56
Trav6-4-202ENSMUST00000184650 Zcchc6Q5BLK4 1491 aaKnown RBP11.55□□□□□ -0.56
Trav6-4-202ENSMUST00000184650 Cecr2E9Q2Z1 1453 aa11.51□□□□□ -0.57
Trav6-4-202ENSMUST00000184650 Ccdc180J3QNE4 1664 aa11.4□□□□□ -0.58
Trav6-4-202ENSMUST00000184650 Col17a1Q07563 1470 aa11.38□□□□□ -0.59
Trav6-4-202ENSMUST00000184650 Shroom2A2ALU4 1481 aa11.36□□□□□ -0.59
Trav6-4-202ENSMUST00000184650 Unc13aQ4KUS2 1712 aa11.35□□□□□ -0.59
Trav6-4-202ENSMUST00000184650 Rsf1E9PWW9 1441 aaKnown RBP11.34□□□□□ -0.59
Trav6-4-202ENSMUST00000184650 Lrriq1Q0P5X1 1673 aa11.33□□□□□ -0.6
Trav6-4-202ENSMUST00000184650 Rhox8Q6VSS7 320 aa11.31□□□□□ -0.6
Trav6-4-202ENSMUST00000184650 Pabpn1Q8CCS6 302 aaKnown RBP11.24□□□□□ -0.61
Trav6-4-202ENSMUST00000184650 Pcdh10E9PXQ7 1057 aa11.23□□□□□ -0.61
Trav6-4-202ENSMUST00000184650 Cux2P70298 1426 aa11.16□□□□□ -0.62
Trav6-4-202ENSMUST00000184650 Eif4g3Q80XI3 1579 aaKnown RBP11.13□□□□□ -0.63
Trav6-4-202ENSMUST00000184650 Kif21aQ9QXL2 1672 aa11.11□□□□□ -0.63
Trav6-4-202ENSMUST00000184650 Top2bQ64511 1612 aa11.09□□□□□ -0.63
Trav6-4-202ENSMUST00000184650 CftrP26361 1476 aa11.08□□□□□ -0.64
Trav6-4-202ENSMUST00000184650 Pelp1Q9DBD5 1123 aaKnown RBP11.07□□□□□ -0.64
Trav6-4-202ENSMUST00000184650 Kif15Q6P9L6 1387 aa11.03□□□□□ -0.64
Trav6-4-202ENSMUST00000184650 Npm1Q61937 292 aaKnown RBP11.03□□□□□ -0.64
Trav6-4-202ENSMUST00000184650 Zcchc11B2RX14 1644 aaKnown RBP11.02□□□□□ -0.65
Trav6-4-202ENSMUST00000184650 Plb1Q3TTY0 1478 aa11□□□□□ -0.65
Trav6-4-202ENSMUST00000184650 Urb2E9Q7L1 1524 aaKnown RBP10.99□□□□□ -0.65
Trav6-4-202ENSMUST00000184650 Synj1Q8CHC4 1574 aa10.99□□□□□ -0.65
Trav6-4-202ENSMUST00000184650 Cttnbp2B9EJA2 1648 aa10.98□□□□□ -0.65
Trav6-4-202ENSMUST00000184650 Arhgef5E9Q7D5 1581 aa10.92□□□□□ -0.66
Trav6-4-202ENSMUST00000184650 Cep164Q5DU05 1446 aa10.9□□□□□ -0.66
Trav6-4-202ENSMUST00000184650 Esf1Q3V1V3 845 aaKnown RBP10.89□□□□□ -0.67
Trav6-4-202ENSMUST00000184650 Dhx29Q6PGC1 1365 aaKnown RBP10.89□□□□□ -0.67
Trav6-4-202ENSMUST00000184650 Ttbk1Q6PCN3 1308 aa10.87□□□□□ -0.67
Trav6-4-202ENSMUST00000184650 Adgrl3Q80TS3 1537 aa10.86□□□□□ -0.67
Trav6-4-202ENSMUST00000184650 Gm156Q58A37 223 aa10.86□□□□□ -0.67
Trav6-4-202ENSMUST00000184650 Brd4Q9ESU6 1400 aaKnown RBP10.85□□□□□ -0.67
Trav6-4-202ENSMUST00000184650 Lamc3Q9R0B6 1581 aa10.85□□□□□ -0.67
Trav6-4-202ENSMUST00000184650 PtprtQ99M80 1454 aa10.81□□□□□ -0.68
Trav6-4-202ENSMUST00000184650 Rusc2Q80U22 1514 aa10.81□□□□□ -0.68
Trav6-4-202ENSMUST00000184650 Il27Q8K3I6 234 aa10.8□□□□□ -0.68
Trav6-4-202ENSMUST00000184650 LrpprcQ6PB66 1392 aaKnown RBP10.78□□□□□ -0.68
Trav6-4-202ENSMUST00000184650 PtprkP35822 1457 aa10.78□□□□□ -0.68
Trav6-4-202ENSMUST00000184650 Ift140E9PY46 1464 aa10.77□□□□□ -0.69
Trav6-4-202ENSMUST00000184650 Ccdc136Q3TVA9 1136 aa10.75□□□□□ -0.69
Trav6-4-202ENSMUST00000184650 Crocc2F6XLV1 1638 aa10.73□□□□□ -0.69
Trav6-4-202ENSMUST00000184650 Plekhg3Q4VAC9 1341 aa10.72□□□□□ -0.69
Trav6-4-202ENSMUST00000184650 Cep170Q6A065 1588 aa10.7□□□□□ -0.7
Trav6-4-202ENSMUST00000184650 Gapvd1Q6PAR5 1458 aa10.69□□□□□ -0.7
Trav6-4-202ENSMUST00000184650 Disp1Q3TDN0 1521 aa10.68□□□□□ -0.7
Trav6-4-202ENSMUST00000184650 Ccdc18Q640L5 1455 aa10.67□□□□□ -0.7
Trav6-4-202ENSMUST00000184650 PogzQ8BZH4 1409 aaKnown RBP10.66□□□□□ -0.7
Trav6-4-202ENSMUST00000184650 Pprc1Q6NZN1 1644 aa10.64□□□□□ -0.71
Trav6-4-202ENSMUST00000184650 Fgd6Q69ZL1 1399 aa10.62□□□□□ -0.71
Trav6-4-202ENSMUST00000184650 Cc2d2bA0A286YDU8 1405 aa10.61□□□□□ -0.71
Trav6-4-202ENSMUST00000184650 Nup160Q9Z0W3 1402 aaKnown RBP10.61□□□□□ -0.71
Trav6-4-202ENSMUST00000184650 Phf23Q8BSN5 401 aa10.61□□□□□ -0.71
Trav6-4-202ENSMUST00000184650 Ythdc2B2RR83 1445 aaKnown RBP10.59□□□□□ -0.71
Trav6-4-202ENSMUST00000184650 Duox2A2AQ99 1517 aa10.59□□□□□ -0.71
Trav6-4-202ENSMUST00000184650 Golga3P55937 1487 aa10.58□□□□□ -0.72
Trav6-4-202ENSMUST00000184650 Rapgef2Q8CHG7 1496 aa10.57□□□□□ -0.72
Trav6-4-202ENSMUST00000184650 Ppp1r18Q8BQ30 594 aa10.57□□□□□ -0.72
Trav6-4-202ENSMUST00000184650 Camsap1A2AHC3 1581 aa10.56□□□□□ -0.72
Trav6-4-202ENSMUST00000184650 Setd1bQ8CFT2 1985 aa10.54□□□□□ -0.72
Trav6-4-202ENSMUST00000184650 TnnQ80Z71 1560 aa10.53□□□□□ -0.72
Trav6-4-202ENSMUST00000184650 Abcc1O35379 1528 aa10.52□□□□□ -0.73
Trav6-4-202ENSMUST00000184650 AknaQ80VW7 1404 aa10.51□□□□□ -0.73
Trav6-4-202ENSMUST00000184650 Cypt1Q8CH20 168 aa10.51□□□□□ -0.73
Trav6-4-202ENSMUST00000184650 Setbp1Q9Z180 1582 aa10.51□□□□□ -0.73
Trav6-4-202ENSMUST00000184650 AqrQ8CFQ3 1481 aaKnown RBP10.49□□□□□ -0.73
Trav6-4-202ENSMUST00000184650 CadpsQ80TJ1 1355 aa10.48□□□□□ -0.73
Trav6-4-202ENSMUST00000184650 Rad54l2Q99NG0 1466 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms