RNA–Protein interactions for RNA: ENSMUST00000181618.1

6530411M01Rik-201, mousemouse

TSL 1 (best) BASIC

Gene 6530411M01Rik, Length 1,033 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
6530411M01Rik-201ENSMUST00000181618 Gm35339A0A140LHH9 1649 aa21.8■■□□□ 1.08
6530411M01Rik-201ENSMUST00000181618 Abcc9P70170 1546 aa21.55■■□□□ 1.04
6530411M01Rik-201ENSMUST00000181618 NischQ80TM9 1593 aa21.03■□□□□ 0.96
6530411M01Rik-201ENSMUST00000181618 ScribQ80U72 1612 aa20.72■□□□□ 0.91
6530411M01Rik-201ENSMUST00000181618 Dnajc5bQ9CQ94 199 aa20.7■□□□□ 0.9
6530411M01Rik-201ENSMUST00000181618 Abcc8B2RUS7 1588 aa20.67■□□□□ 0.9
6530411M01Rik-201ENSMUST00000181618 NacadQ5SWP3 1504 aa19.7■□□□□ 0.74
6530411M01Rik-201ENSMUST00000181618 Kdm5dQ62240 1548 aa19.68■□□□□ 0.74
6530411M01Rik-201ENSMUST00000181618 Dnajc5P60904 198 aa19.61■□□□□ 0.73
6530411M01Rik-201ENSMUST00000181618 BicraF8VPZ9 1578 aa19.47■□□□□ 0.71
6530411M01Rik-201ENSMUST00000181618 Sycp2Q9CUU3 1500 aa19.42■□□□□ 0.7
6530411M01Rik-201ENSMUST00000181618 Thoc2B1AZI6 1594 aaKnown RBP19.34■□□□□ 0.69
6530411M01Rik-201ENSMUST00000181618 Cc2d2aQ8CFW7 1633 aa19■□□□□ 0.63
6530411M01Rik-201ENSMUST00000181618 Trim41Q5NCC3 630 aa18.97■□□□□ 0.63
6530411M01Rik-201ENSMUST00000181618 Pds5bQ4VA53 1446 aaKnown RBP18.91■□□□□ 0.62
6530411M01Rik-201ENSMUST00000181618 Dcaf1Q80TR8 1506 aa18.74■□□□□ 0.59
6530411M01Rik-201ENSMUST00000181618 Fam135aQ6NS59 1506 aa18.6■□□□□ 0.57
6530411M01Rik-201ENSMUST00000181618 Atad2bE9Q166 1460 aaKnown RBP18.55■□□□□ 0.56
6530411M01Rik-201ENSMUST00000181618 Ercc6F8VPZ5 1481 aa18.51■□□□□ 0.55
6530411M01Rik-201ENSMUST00000181618 Smarca2Q6DIC0 1577 aa18.28■□□□□ 0.52
6530411M01Rik-201ENSMUST00000181618 Rb1cc1Q9ESK9 1588 aa18.26■□□□□ 0.51
6530411M01Rik-201ENSMUST00000181618 Phldb1Q6PDH0 1371 aaKnown RBP18.16■□□□□ 0.5
6530411M01Rik-201ENSMUST00000181618 Mrc2Q64449 1479 aa18.15■□□□□ 0.5
6530411M01Rik-201ENSMUST00000181618 Frmpd1A2AKB4 1549 aa18.13■□□□□ 0.49
6530411M01Rik-201ENSMUST00000181618 Wdr62Q3U3T8 1523 aa18.13■□□□□ 0.49
6530411M01Rik-201ENSMUST00000181618 Iqgap2Q3UQ44 1575 aa18.13■□□□□ 0.49
6530411M01Rik-201ENSMUST00000181618 Ubl4bQ9CQ84 188 aa18.1■□□□□ 0.49
6530411M01Rik-201ENSMUST00000181618 Chic1Q8CBW7 227 aa18.09■□□□□ 0.49
6530411M01Rik-201ENSMUST00000181618 Baz1bQ9Z277 1479 aa18.07■□□□□ 0.48
6530411M01Rik-201ENSMUST00000181618 Col17a1Q07563 1470 aa18.03■□□□□ 0.48
6530411M01Rik-201ENSMUST00000181618 Smarca4Q3TKT4 1613 aaKnown RBP18.02■□□□□ 0.48
6530411M01Rik-201ENSMUST00000181618 Unc13aQ4KUS2 1712 aa17.98■□□□□ 0.47
6530411M01Rik-201ENSMUST00000181618 Shroom2A2ALU4 1481 aa17.97■□□□□ 0.47
6530411M01Rik-201ENSMUST00000181618 Lrriq1Q0P5X1 1673 aa17.96■□□□□ 0.47
6530411M01Rik-201ENSMUST00000181618 Baz1aO88379 1555 aa17.86■□□□□ 0.45
6530411M01Rik-201ENSMUST00000181618 Zcchc6Q5BLK4 1491 aaKnown RBP17.85■□□□□ 0.45
6530411M01Rik-201ENSMUST00000181618 Crybg2B7ZCC2 1516 aa17.81■□□□□ 0.44
6530411M01Rik-201ENSMUST00000181618 Pcdh10E9PXQ7 1057 aa17.8■□□□□ 0.44
6530411M01Rik-201ENSMUST00000181618 Cecr2E9Q2Z1 1453 aa17.78■□□□□ 0.44
6530411M01Rik-201ENSMUST00000181618 Rsf1E9PWW9 1441 aaKnown RBP17.78■□□□□ 0.44
6530411M01Rik-201ENSMUST00000181618 Mapk8ip2Q9ERE9 830 aa17.69■□□□□ 0.42
6530411M01Rik-201ENSMUST00000181618 Eif4g3Q80XI3 1579 aaKnown RBP17.61■□□□□ 0.41
6530411M01Rik-201ENSMUST00000181618 Ccdc180J3QNE4 1664 aa17.59■□□□□ 0.41
6530411M01Rik-201ENSMUST00000181618 Top2bQ64511 1612 aa17.58■□□□□ 0.41
6530411M01Rik-201ENSMUST00000181618 Pabpn1Q8CCS6 302 aaKnown RBP17.56■□□□□ 0.4
6530411M01Rik-201ENSMUST00000181618 Kif21aQ9QXL2 1672 aa17.55■□□□□ 0.4
6530411M01Rik-201ENSMUST00000181618 Pelp1Q9DBD5 1123 aaKnown RBP17.42■□□□□ 0.38
6530411M01Rik-201ENSMUST00000181618 Zcchc11B2RX14 1644 aaKnown RBP17.42■□□□□ 0.38
6530411M01Rik-201ENSMUST00000181618 Arhgef5E9Q7D5 1581 aa17.41■□□□□ 0.38
6530411M01Rik-201ENSMUST00000181618 Cux2P70298 1426 aa17.31■□□□□ 0.36
6530411M01Rik-201ENSMUST00000181618 Plb1Q3TTY0 1478 aa17.18■□□□□ 0.34
6530411M01Rik-201ENSMUST00000181618 Ttbk1Q6PCN3 1308 aa17.17■□□□□ 0.34
6530411M01Rik-201ENSMUST00000181618 Urb2E9Q7L1 1524 aaKnown RBP17.16■□□□□ 0.34
6530411M01Rik-201ENSMUST00000181618 Cypt1Q8CH20 168 aa17.13■□□□□ 0.33
6530411M01Rik-201ENSMUST00000181618 Adgrl3Q80TS3 1537 aa17.11■□□□□ 0.33
6530411M01Rik-201ENSMUST00000181618 Kif15Q6P9L6 1387 aa17.07■□□□□ 0.32
6530411M01Rik-201ENSMUST00000181618 Rhox8Q6VSS7 320 aa17.07■□□□□ 0.32
6530411M01Rik-201ENSMUST00000181618 CftrP26361 1476 aa17.05■□□□□ 0.32
6530411M01Rik-201ENSMUST00000181618 Cttnbp2B9EJA2 1648 aa17.04■□□□□ 0.32
6530411M01Rik-201ENSMUST00000181618 PtprtQ99M80 1454 aa17.01■□□□□ 0.31
6530411M01Rik-201ENSMUST00000181618 Plekhg3Q4VAC9 1341 aa16.99■□□□□ 0.31
6530411M01Rik-201ENSMUST00000181618 Rusc2Q80U22 1514 aa16.99■□□□□ 0.31
6530411M01Rik-201ENSMUST00000181618 Synj1Q8CHC4 1574 aa16.98■□□□□ 0.31
6530411M01Rik-201ENSMUST00000181618 Npm1Q61937 292 aaKnown RBP16.96■□□□□ 0.31
6530411M01Rik-201ENSMUST00000181618 Gm156Q58A37 223 aa16.92■□□□□ 0.3
6530411M01Rik-201ENSMUST00000181618 Cep170Q6A065 1588 aa16.91■□□□□ 0.3
6530411M01Rik-201ENSMUST00000181618 PtprkP35822 1457 aa16.88■□□□□ 0.29
6530411M01Rik-201ENSMUST00000181618 Dhx29Q6PGC1 1365 aaKnown RBP16.87■□□□□ 0.29
6530411M01Rik-201ENSMUST00000181618 Pprc1Q6NZN1 1644 aa16.85■□□□□ 0.29
6530411M01Rik-201ENSMUST00000181618 Cep164Q5DU05 1446 aa16.81■□□□□ 0.28
6530411M01Rik-201ENSMUST00000181618 Gapvd1Q6PAR5 1458 aa16.79■□□□□ 0.28
6530411M01Rik-201ENSMUST00000181618 Crocc2F6XLV1 1638 aa16.78■□□□□ 0.28
6530411M01Rik-201ENSMUST00000181618 Lamc3Q9R0B6 1581 aa16.78■□□□□ 0.28
6530411M01Rik-201ENSMUST00000181618 Ift140E9PY46 1464 aa16.73■□□□□ 0.27
6530411M01Rik-201ENSMUST00000181618 Setd1bQ8CFT2 1985 aa16.69■□□□□ 0.26
6530411M01Rik-201ENSMUST00000181618 Il27Q8K3I6 234 aa16.65■□□□□ 0.26
6530411M01Rik-201ENSMUST00000181618 Esf1Q3V1V3 845 aaKnown RBP16.62■□□□□ 0.25
6530411M01Rik-201ENSMUST00000181618 LrpprcQ6PB66 1392 aaKnown RBP16.6■□□□□ 0.25
6530411M01Rik-201ENSMUST00000181618 Alpk3Q924C5 1678 aa16.59■□□□□ 0.25
6530411M01Rik-201ENSMUST00000181618 Rapgef2Q8CHG7 1496 aa16.58■□□□□ 0.24
6530411M01Rik-201ENSMUST00000181618 Brd4Q9ESU6 1400 aaKnown RBP16.57■□□□□ 0.24
6530411M01Rik-201ENSMUST00000181618 Disp1Q3TDN0 1521 aa16.55■□□□□ 0.24
6530411M01Rik-201ENSMUST00000181618 Ppp1r18Q8BQ30 594 aa16.54■□□□□ 0.24
6530411M01Rik-201ENSMUST00000181618 Setbp1Q9Z180 1582 aa16.51■□□□□ 0.23
6530411M01Rik-201ENSMUST00000181618 Camsap1A2AHC3 1581 aa16.51■□□□□ 0.23
6530411M01Rik-201ENSMUST00000181618 Fbxo41Q6NS60 873 aa16.5■□□□□ 0.23
6530411M01Rik-201ENSMUST00000181618 Ythdc2B2RR83 1445 aaKnown RBP16.5■□□□□ 0.23
6530411M01Rik-201ENSMUST00000181618 Cyb5rlB1AS42 316 aa16.48■□□□□ 0.23
6530411M01Rik-201ENSMUST00000181618 Plppr3Q7TPB0 716 aa16.47■□□□□ 0.23
6530411M01Rik-201ENSMUST00000181618 Ccdc88bQ4QRL3 1481 aa16.47■□□□□ 0.23
6530411M01Rik-201ENSMUST00000181618 Nup160Q9Z0W3 1402 aaKnown RBP16.46■□□□□ 0.23
6530411M01Rik-201ENSMUST00000181618 Ccdc18Q640L5 1455 aa16.46■□□□□ 0.23
6530411M01Rik-201ENSMUST00000181618 Fgd6Q69ZL1 1399 aa16.45■□□□□ 0.22
6530411M01Rik-201ENSMUST00000181618 Ak9G3UYQ4 1894 aa16.45■□□□□ 0.22
6530411M01Rik-201ENSMUST00000181618 Abcc1O35379 1528 aa16.45■□□□□ 0.22
6530411M01Rik-201ENSMUST00000181618 PogzQ8BZH4 1409 aaKnown RBP16.44■□□□□ 0.22
6530411M01Rik-201ENSMUST00000181618 Hecw2Q6I6G8 1578 aa16.43■□□□□ 0.22
6530411M01Rik-201ENSMUST00000181618 Chd1P40201 1711 aa16.42■□□□□ 0.22
6530411M01Rik-201ENSMUST00000181618 Cc2d2bA0A286YDU8 1405 aa16.42■□□□□ 0.22
6530411M01Rik-201ENSMUST00000181618 Ercc6l2Q9JIM3 1537 aa16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms