RNA–Protein interactions for RNA: ENSMUST00000172501.7

1110038B12Rik-201, mousemouse

TSL 1 (best) BASIC

Gene 1110038B12Rik, Length 579 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
1110038B12Rik-201ENSMUST00000172501 Gm35339A0A140LHH9 1649 aa16.41■□□□□ 0.22
1110038B12Rik-201ENSMUST00000172501 NischQ80TM9 1593 aa15.92■□□□□ 0.14
1110038B12Rik-201ENSMUST00000172501 Abcc9P70170 1546 aa15.58■□□□□ 0.08
1110038B12Rik-201ENSMUST00000172501 Abcc8B2RUS7 1588 aa15.53■□□□□ 0.08
1110038B12Rik-201ENSMUST00000172501 ScribQ80U72 1612 aa15.2■□□□□ 0.02
1110038B12Rik-201ENSMUST00000172501 NacadQ5SWP3 1504 aa14.77□□□□□ -0.04
1110038B12Rik-201ENSMUST00000172501 Kdm5dQ62240 1548 aa14.6□□□□□ -0.07
1110038B12Rik-201ENSMUST00000172501 Dnajc5bQ9CQ94 199 aa14.49□□□□□ -0.09
1110038B12Rik-201ENSMUST00000172501 Sycp2Q9CUU3 1500 aa14.47□□□□□ -0.09
1110038B12Rik-201ENSMUST00000172501 BicraF8VPZ9 1578 aa14.3□□□□□ -0.12
1110038B12Rik-201ENSMUST00000172501 Dcaf1Q80TR8 1506 aa14.29□□□□□ -0.12
1110038B12Rik-201ENSMUST00000172501 Pds5bQ4VA53 1446 aaKnown RBP14.11□□□□□ -0.15
1110038B12Rik-201ENSMUST00000172501 Thoc2B1AZI6 1594 aaKnown RBP14.09□□□□□ -0.15
1110038B12Rik-201ENSMUST00000172501 Atad2bE9Q166 1460 aaKnown RBP13.85□□□□□ -0.19
1110038B12Rik-201ENSMUST00000172501 Crybg2B7ZCC2 1516 aa13.84□□□□□ -0.19
1110038B12Rik-201ENSMUST00000172501 Rb1cc1Q9ESK9 1588 aa13.81□□□□□ -0.2
1110038B12Rik-201ENSMUST00000172501 Cc2d2aQ8CFW7 1633 aa13.8□□□□□ -0.2
1110038B12Rik-201ENSMUST00000172501 Baz1bQ9Z277 1479 aa13.79□□□□□ -0.2
1110038B12Rik-201ENSMUST00000172501 Dnajc5P60904 198 aa13.76□□□□□ -0.21
1110038B12Rik-201ENSMUST00000172501 Ccdc180J3QNE4 1664 aa13.73□□□□□ -0.21
1110038B12Rik-201ENSMUST00000172501 Ercc6F8VPZ5 1481 aa13.72□□□□□ -0.21
1110038B12Rik-201ENSMUST00000172501 Fam135aQ6NS59 1506 aa13.69□□□□□ -0.22
1110038B12Rik-201ENSMUST00000172501 Baz1aO88379 1555 aa13.62□□□□□ -0.23
1110038B12Rik-201ENSMUST00000172501 Smarca2Q6DIC0 1577 aa13.6□□□□□ -0.23
1110038B12Rik-201ENSMUST00000172501 Phldb1Q6PDH0 1371 aaKnown RBP13.55□□□□□ -0.24
1110038B12Rik-201ENSMUST00000172501 Smarca4Q3TKT4 1613 aaKnown RBP13.51□□□□□ -0.25
1110038B12Rik-201ENSMUST00000172501 Iqgap2Q3UQ44 1575 aa13.47□□□□□ -0.25
1110038B12Rik-201ENSMUST00000172501 Wdr62Q3U3T8 1523 aa13.46□□□□□ -0.25
1110038B12Rik-201ENSMUST00000172501 Frmpd1A2AKB4 1549 aa13.43□□□□□ -0.26
1110038B12Rik-201ENSMUST00000172501 Zcchc6Q5BLK4 1491 aaKnown RBP13.4□□□□□ -0.26
1110038B12Rik-201ENSMUST00000172501 Ubl4bQ9CQ84 188 aa13.38□□□□□ -0.27
1110038B12Rik-201ENSMUST00000172501 Mrc2Q64449 1479 aa13.36□□□□□ -0.27
1110038B12Rik-201ENSMUST00000172501 Trim41Q5NCC3 630 aa13.24□□□□□ -0.29
1110038B12Rik-201ENSMUST00000172501 Cecr2E9Q2Z1 1453 aa13.23□□□□□ -0.29
1110038B12Rik-201ENSMUST00000172501 Unc13aQ4KUS2 1712 aa13.18□□□□□ -0.3
1110038B12Rik-201ENSMUST00000172501 Rhox8Q6VSS7 320 aa13.15□□□□□ -0.3
1110038B12Rik-201ENSMUST00000172501 Rsf1E9PWW9 1441 aaKnown RBP13.11□□□□□ -0.31
1110038B12Rik-201ENSMUST00000172501 Shroom2A2ALU4 1481 aa13.1□□□□□ -0.31
1110038B12Rik-201ENSMUST00000172501 Lrriq1Q0P5X1 1673 aa13.05□□□□□ -0.32
1110038B12Rik-201ENSMUST00000172501 Col17a1Q07563 1470 aa12.94□□□□□ -0.34
1110038B12Rik-201ENSMUST00000172501 Cttnbp2B9EJA2 1648 aa12.94□□□□□ -0.34
1110038B12Rik-201ENSMUST00000172501 CftrP26361 1476 aa12.93□□□□□ -0.34
1110038B12Rik-201ENSMUST00000172501 Eif4g3Q80XI3 1579 aaKnown RBP12.91□□□□□ -0.34
1110038B12Rik-201ENSMUST00000172501 Cux2P70298 1426 aa12.88□□□□□ -0.35
1110038B12Rik-201ENSMUST00000172501 Pabpn1Q8CCS6 302 aaKnown RBP12.84□□□□□ -0.35
1110038B12Rik-201ENSMUST00000172501 Kif21aQ9QXL2 1672 aa12.83□□□□□ -0.35
1110038B12Rik-201ENSMUST00000172501 Top2bQ64511 1612 aa12.83□□□□□ -0.36
1110038B12Rik-201ENSMUST00000172501 Brd4Q9ESU6 1400 aaKnown RBP12.82□□□□□ -0.36
1110038B12Rik-201ENSMUST00000172501 Zcchc11B2RX14 1644 aaKnown RBP12.8□□□□□ -0.36
1110038B12Rik-201ENSMUST00000172501 Synj1Q8CHC4 1574 aa12.77□□□□□ -0.36
1110038B12Rik-201ENSMUST00000172501 Kif15Q6P9L6 1387 aa12.76□□□□□ -0.37
1110038B12Rik-201ENSMUST00000172501 Npm1Q61937 292 aaKnown RBP12.75□□□□□ -0.37
1110038B12Rik-201ENSMUST00000172501 Cep164Q5DU05 1446 aa12.7□□□□□ -0.38
1110038B12Rik-201ENSMUST00000172501 Lamc3Q9R0B6 1581 aa12.69□□□□□ -0.38
1110038B12Rik-201ENSMUST00000172501 Plb1Q3TTY0 1478 aa12.65□□□□□ -0.38
1110038B12Rik-201ENSMUST00000172501 Urb2E9Q7L1 1524 aaKnown RBP12.64□□□□□ -0.39
1110038B12Rik-201ENSMUST00000172501 Esf1Q3V1V3 845 aaKnown RBP12.63□□□□□ -0.39
1110038B12Rik-201ENSMUST00000172501 Dhx29Q6PGC1 1365 aaKnown RBP12.57□□□□□ -0.4
1110038B12Rik-201ENSMUST00000172501 Rtl1Q7M732 1744 aa12.57□□□□□ -0.4
1110038B12Rik-201ENSMUST00000172501 Ift140E9PY46 1464 aa12.56□□□□□ -0.4
1110038B12Rik-201ENSMUST00000172501 Pelp1Q9DBD5 1123 aaKnown RBP12.55□□□□□ -0.4
1110038B12Rik-201ENSMUST00000172501 Rusc2Q80U22 1514 aa12.55□□□□□ -0.4
1110038B12Rik-201ENSMUST00000172501 Arhgef5E9Q7D5 1581 aa12.54□□□□□ -0.4
1110038B12Rik-201ENSMUST00000172501 Ccdc18Q640L5 1455 aa12.53□□□□□ -0.4
1110038B12Rik-201ENSMUST00000172501 LrpprcQ6PB66 1392 aaKnown RBP12.53□□□□□ -0.4
1110038B12Rik-201ENSMUST00000172501 Crocc2F6XLV1 1638 aa12.51□□□□□ -0.41
1110038B12Rik-201ENSMUST00000172501 Pcdh10E9PXQ7 1057 aa12.49□□□□□ -0.41
1110038B12Rik-201ENSMUST00000172501 Adgrl3Q80TS3 1537 aa12.44□□□□□ -0.42
1110038B12Rik-201ENSMUST00000172501 Cc2d2bA0A286YDU8 1405 aa12.39□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 PogzQ8BZH4 1409 aaKnown RBP12.39□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 Ccdc136Q3TVA9 1136 aa12.39□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 PtprkP35822 1457 aa12.39□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 TnnQ80Z71 1560 aa12.38□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 Gm156Q58A37 223 aa12.37□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 PtprtQ99M80 1454 aa12.37□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 Pbrm1Q8BSQ9 1634 aaKnown RBP12.37□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 Golga3P55937 1487 aa12.36□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 Camsap1A2AHC3 1581 aa12.35□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 Ttbk1Q6PCN3 1308 aa12.35□□□□□ -0.43
1110038B12Rik-201ENSMUST00000172501 Disp1Q3TDN0 1521 aa12.33□□□□□ -0.44
1110038B12Rik-201ENSMUST00000172501 Il27Q8K3I6 234 aa12.33□□□□□ -0.44
1110038B12Rik-201ENSMUST00000172501 Nup160Q9Z0W3 1402 aaKnown RBP12.33□□□□□ -0.44
1110038B12Rik-201ENSMUST00000172501 Cep170Q6A065 1588 aa12.32□□□□□ -0.44
1110038B12Rik-201ENSMUST00000172501 Gapvd1Q6PAR5 1458 aa12.31□□□□□ -0.44
1110038B12Rik-201ENSMUST00000172501 Duox2A2AQ99 1517 aa12.31□□□□□ -0.44
1110038B12Rik-201ENSMUST00000172501 Fgd6Q69ZL1 1399 aa12.3□□□□□ -0.44
1110038B12Rik-201ENSMUST00000172501 Setd1bQ8CFT2 1985 aa12.29□□□□□ -0.44
1110038B12Rik-201ENSMUST00000172501 Efcab5A0JP43 1406 aa12.21□□□□□ -0.45
1110038B12Rik-201ENSMUST00000172501 AqrQ8CFQ3 1481 aaKnown RBP12.21□□□□□ -0.46
1110038B12Rik-201ENSMUST00000172501 Pprc1Q6NZN1 1644 aa12.19□□□□□ -0.46
1110038B12Rik-201ENSMUST00000172501 CadpsQ80TJ1 1355 aa12.18□□□□□ -0.46
1110038B12Rik-201ENSMUST00000172501 Plekhg3Q4VAC9 1341 aa12.18□□□□□ -0.46
1110038B12Rik-201ENSMUST00000172501 Grin2bQ01097 1482 aa12.17□□□□□ -0.46
1110038B12Rik-201ENSMUST00000172501 Ythdc2B2RR83 1445 aaKnown RBP12.16□□□□□ -0.46
1110038B12Rik-201ENSMUST00000172501 Rapgef2Q8CHG7 1496 aa12.15□□□□□ -0.46
1110038B12Rik-201ENSMUST00000172501 Abcc1O35379 1528 aa12.15□□□□□ -0.46
1110038B12Rik-201ENSMUST00000172501 Grin2aP35436 1464 aa12.14□□□□□ -0.47
1110038B12Rik-201ENSMUST00000172501 Samd9lQ69Z37 1561 aa12.13□□□□□ -0.47
1110038B12Rik-201ENSMUST00000172501 Setbp1Q9Z180 1582 aa12.13□□□□□ -0.47
1110038B12Rik-201ENSMUST00000172501 Fmn1Q05860 1466 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms