RNA–Protein interactions for RNA: ENSMUST00000143870.1

Gm13490-201, mousemouse

TSL 1 (best) BASIC

Gene Gm13490, Length 2,409 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm13490-201ENSMUST00000143870 Rpgrip1Q9EPQ2 1331 aa15.43■□□□□ 0.06
Gm13490-201ENSMUST00000143870 Pcgf6Q99NA9 353 aa14.78□□□□□ -0.04
Gm13490-201ENSMUST00000143870 Myt1Q8CFC2 1127 aa14.71□□□□□ -0.06
Gm13490-201ENSMUST00000143870 DiexfQ8BTT6 772 aaKnown RBP14.53□□□□□ -0.08
Gm13490-201ENSMUST00000143870 Las1lA2BE28 776 aaKnown RBP14.47□□□□□ -0.09
Gm13490-201ENSMUST00000143870 CenpbP27790 599 aa14.42□□□□□ -0.1
Gm13490-201ENSMUST00000143870 Acin1Q9JIX8 1338 aaKnown RBP14.42□□□□□ -0.1
Gm13490-201ENSMUST00000143870 Bcl11aQ9QYE3 773 aa14.11□□□□□ -0.15
Gm13490-201ENSMUST00000143870 Neurod1Q60867 357 aa14.06□□□□□ -0.16
Gm13490-201ENSMUST00000143870 1700123L14RikQ3V2K7 440 aa13.98□□□□□ -0.17
Gm13490-201ENSMUST00000143870 Amer1Q7TS75 1132 aa13.97□□□□□ -0.17
Gm13490-201ENSMUST00000143870 Rtl1Q7M732 1744 aa13.92□□□□□ -0.18
Gm13490-201ENSMUST00000143870 Trim41Q5NCC3 630 aa13.86□□□□□ -0.19
Gm13490-201ENSMUST00000143870 Ccdc180J3QNE4 1664 aa13.83□□□□□ -0.2
Gm13490-201ENSMUST00000143870 Supt5hO55201 1082 aaKnown RBP13.77□□□□□ -0.21
Gm13490-201ENSMUST00000143870 Aplp2Q06335 707 aa13.7□□□□□ -0.22
Gm13490-201ENSMUST00000143870 PrkcshO08795 521 aa13.68□□□□□ -0.22
Gm13490-201ENSMUST00000143870 Anks4bQ8K3X6 423 aa13.65□□□□□ -0.22
Gm13490-201ENSMUST00000143870 Csrnp3P59055 597 aa13.6□□□□□ -0.23
Gm13490-201ENSMUST00000143870 Rhox8Q6VSS7 320 aa13.6□□□□□ -0.23
Gm13490-201ENSMUST00000143870 Cngb1E1AZ71 1325 aa13.53□□□□□ -0.24
Gm13490-201ENSMUST00000143870 Dcaf1Q80TR8 1506 aa13.53□□□□□ -0.24
Gm13490-201ENSMUST00000143870 Ehmt2Q9Z148 1263 aaKnown RBP13.34□□□□□ -0.27
Gm13490-201ENSMUST00000143870 CatipB9EKE5 520 aa13.23□□□□□ -0.29
Gm13490-201ENSMUST00000143870 Ifnlr1Q8CGK5 535 aa13.19□□□□□ -0.3
Gm13490-201ENSMUST00000143870 Pknox2Q8BG99 474 aa13.16□□□□□ -0.3
Gm13490-201ENSMUST00000143870 NrdcQ8BHG1 1161 aa13.12□□□□□ -0.31
Gm13490-201ENSMUST00000143870 Fgd1P52734 960 aa13.11□□□□□ -0.31
Gm13490-201ENSMUST00000143870 Fam71e1A1L3C1 212 aa13.1□□□□□ -0.31
Gm13490-201ENSMUST00000143870 Rtl5Q5DTT4 599 aa13.07□□□□□ -0.32
Gm13490-201ENSMUST00000143870 Sall2Q9QX96 1004 aa13.03□□□□□ -0.32
Gm13490-201ENSMUST00000143870 Hdac5Q9Z2V6 1113 aa13.03□□□□□ -0.32
Gm13490-201ENSMUST00000143870 Cdk11bP24788 784 aaKnown RBP13.02□□□□□ -0.33
Gm13490-201ENSMUST00000143870 Zeb1Q64318 1117 aa12.99□□□□□ -0.33
Gm13490-201ENSMUST00000143870 Gm38655A0A286YDK6 273 aa12.97□□□□□ -0.33
Gm13490-201ENSMUST00000143870 NefmP08553 848 aa12.92□□□□□ -0.34
Gm13490-201ENSMUST00000143870 Nop58Q6DFW4 536 aaKnown RBP12.89□□□□□ -0.35
Gm13490-201ENSMUST00000143870 HrcG5E8J6 738 aa12.88□□□□□ -0.35
Gm13490-201ENSMUST00000143870 Zcchc6Q5BLK4 1491 aaKnown RBP12.88□□□□□ -0.35
Gm13490-201ENSMUST00000143870 Pelp1Q9DBD5 1123 aaKnown RBP12.87□□□□□ -0.35
Gm13490-201ENSMUST00000143870 Plppr3Q7TPB0 716 aa12.81□□□□□ -0.36
Gm13490-201ENSMUST00000143870 Gtf3c5Q8R2T8 520 aa12.78□□□□□ -0.36
Gm13490-201ENSMUST00000143870 BccipQ9CWI3 316 aa12.77□□□□□ -0.37
Gm13490-201ENSMUST00000143870 Gtf3c3Q3TMP1 882 aa12.76□□□□□ -0.37
Gm13490-201ENSMUST00000143870 Ccdc9Q8VC31 543 aaKnown RBP12.72□□□□□ -0.37
Gm13490-201ENSMUST00000143870 Tnnt3Q9QZ47 272 aa12.72□□□□□ -0.37
Gm13490-201ENSMUST00000143870 Anp32aO35381 247 aa12.71□□□□□ -0.38
Gm13490-201ENSMUST00000143870 Ttbk1Q6PCN3 1308 aa12.69□□□□□ -0.38
Gm13490-201ENSMUST00000143870 Mapk8ip2Q9ERE9 830 aa12.68□□□□□ -0.38
Gm13490-201ENSMUST00000143870 Plcd4Q8K3R3 807 aa12.65□□□□□ -0.38
Gm13490-201ENSMUST00000143870 NischQ80TM9 1593 aa12.64□□□□□ -0.39
Gm13490-201ENSMUST00000143870 ClspnQ80YR7 1315 aa12.63□□□□□ -0.39
Gm13490-201ENSMUST00000143870 Irx3P81067 507 aa12.61□□□□□ -0.39
Gm13490-201ENSMUST00000143870 Upf2A2AT37 1269 aaKnown RBP12.61□□□□□ -0.39
Gm13490-201ENSMUST00000143870 Ipo4Q8VI75 1082 aa12.59□□□□□ -0.39
Gm13490-201ENSMUST00000143870 SafbD3YXK2 937 aaKnown RBP12.57□□□□□ -0.4
Gm13490-201ENSMUST00000143870 Znf316Q6PGE4 1016 aa12.57□□□□□ -0.4
Gm13490-201ENSMUST00000143870 Wdr66E9Q743 1299 aa12.54□□□□□ -0.4
Gm13490-201ENSMUST00000143870 Hnrnpul2Q00PI9 745 aaKnown RBP12.5□□□□□ -0.41
Gm13490-201ENSMUST00000143870 Aebp2Q9Z248 504 aaKnown RBP12.48□□□□□ -0.41
Gm13490-201ENSMUST00000143870 Il27Q8K3I6 234 aa12.47□□□□□ -0.41
Gm13490-201ENSMUST00000143870 Ccdc27Q3V036 639 aa12.45□□□□□ -0.42
Gm13490-201ENSMUST00000143870 TimelessQ9R1X4 1197 aa12.45□□□□□ -0.42
Gm13490-201ENSMUST00000143870 Scaf1Q5U4C3 1256 aaKnown RBP12.44□□□□□ -0.42
Gm13490-201ENSMUST00000143870 Zfp777B9EKF4 885 aa12.43□□□□□ -0.42
Gm13490-201ENSMUST00000143870 Mier1Q5UAK0 511 aa12.39□□□□□ -0.43
Gm13490-201ENSMUST00000143870 Abcc9P70170 1546 aa12.37□□□□□ -0.43
Gm13490-201ENSMUST00000143870 AampJ3QN89 436 aa12.36□□□□□ -0.43
Gm13490-201ENSMUST00000143870 Eif5bQ05D44 1216 aaKnown RBP12.35□□□□□ -0.43
Gm13490-201ENSMUST00000143870 Supt16hQ920B9 1047 aa12.35□□□□□ -0.43
Gm13490-201ENSMUST00000143870 Nolc1E9Q5C9 702 aaKnown RBP12.31□□□□□ -0.44
Gm13490-201ENSMUST00000143870 NeflP08551 543 aa12.31□□□□□ -0.44
Gm13490-201ENSMUST00000143870 Kcnn1Q9EQR3 537 aa12.3□□□□□ -0.44
Gm13490-201ENSMUST00000143870 Hsp90aa1P07901 733 aaKnown RBP12.29□□□□□ -0.44
Gm13490-201ENSMUST00000143870 Myt1lP97500 1187 aa12.28□□□□□ -0.44
Gm13490-201ENSMUST00000143870 Pdcl3Q8BVF2 240 aa12.23□□□□□ -0.45
Gm13490-201ENSMUST00000143870 Dnttip2Q8R2M2 758 aaKnown RBP12.21□□□□□ -0.45
Gm13490-201ENSMUST00000143870 Anp32bQ9EST5 272 aaKnown RBP12.21□□□□□ -0.45
Gm13490-201ENSMUST00000143870 Rtn4Q99P72 1162 aaKnown RBP12.19□□□□□ -0.46
Gm13490-201ENSMUST00000143870 DmtnQ9WV69 405 aa12.18□□□□□ -0.46
Gm13490-201ENSMUST00000143870 Cep164Q5DU05 1446 aa12.17□□□□□ -0.46
Gm13490-201ENSMUST00000143870 NgefQ8CHT1 710 aa12.17□□□□□ -0.46
Gm13490-201ENSMUST00000143870 Gtf2a1Q99PM3 378 aa12.17□□□□□ -0.46
Gm13490-201ENSMUST00000143870 Stra8P70278 393 aa12.15□□□□□ -0.47
Gm13490-201ENSMUST00000143870 Rbm10Q99KG3 930 aaKnown RBP12.15□□□□□ -0.47
Gm13490-201ENSMUST00000143870 Calr4Q3TQS0 420 aa12.13□□□□□ -0.47
Gm13490-201ENSMUST00000143870 Ppargc1bQ8VHJ7 1014 aa12.1□□□□□ -0.47
Gm13490-201ENSMUST00000143870 Ube2uB1AUC4 352 aa12.1□□□□□ -0.47
Gm13490-201ENSMUST00000143870 Ccdc136Q3TVA9 1136 aa12.09□□□□□ -0.47
Gm13490-201ENSMUST00000143870 Znf710Q3U288 666 aa12.09□□□□□ -0.47
Gm13490-201ENSMUST00000143870 Taok2Q6ZQ29 1240 aa12.09□□□□□ -0.47
Gm13490-201ENSMUST00000143870 Rrp9Q91WM3 475 aaKnown RBP12.09□□□□□ -0.47
Gm13490-201ENSMUST00000143870 4933416C03RikQ3V063 378 aa12.08□□□□□ -0.48
Gm13490-201ENSMUST00000143870 Wdr43Q6ZQL4 677 aaKnown RBP12.03□□□□□ -0.48
Gm13490-201ENSMUST00000143870 Ap3b1Q9Z1T1 1105 aa12.02□□□□□ -0.48
Gm13490-201ENSMUST00000143870 Vgll3P85442 326 aa12.02□□□□□ -0.49
Gm13490-201ENSMUST00000143870 TonslQ6NZL6 1363 aa12.02□□□□□ -0.49
Gm13490-201ENSMUST00000143870 Ipo9Q91YE6 1041 aa12.01□□□□□ -0.49
Gm13490-201ENSMUST00000143870 Ythdc1E9Q5K9 736 aaKnown RBP12□□□□□ -0.49
Gm13490-201ENSMUST00000143870 NacadQ5SWP3 1504 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms