RNA–Protein interactions for RNA: ENSMUST00000118570.1

Hmga1-204, Transcript of High mobility group protein HMG-I/HMG-Y, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Hmga1, Length 1,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1-204ENSMUST00000118570 Gm35339A0A140LHH9 1649 aa37.78■■■■□ 3.64
Hmga1-204ENSMUST00000118570 NischQ80TM9 1593 aa37.48■■■■□ 3.59
Hmga1-204ENSMUST00000118570 Abcc9P70170 1546 aa36.26■■■■□ 3.4
Hmga1-204ENSMUST00000118570 Abcc8B2RUS7 1588 aa36.14■■■■□ 3.38
Hmga1-204ENSMUST00000118570 ScribQ80U72 1612 aa34.64■■■■□ 3.14
Hmga1-204ENSMUST00000118570 NacadQ5SWP3 1504 aa33.62■■■□□ 2.97
Hmga1-204ENSMUST00000118570 Kdm5dQ62240 1548 aa33.58■■■□□ 2.97
Hmga1-204ENSMUST00000118570 Dcaf1Q80TR8 1506 aa33.35■■■□□ 2.93
Hmga1-204ENSMUST00000118570 Sycp2Q9CUU3 1500 aa32.95■■■□□ 2.86
Hmga1-204ENSMUST00000118570 Rhox8Q6VSS7 320 aa32.74■■■□□ 2.83
Hmga1-204ENSMUST00000118570 Rb1cc1Q9ESK9 1588 aa32.66■■■□□ 2.82
Hmga1-204ENSMUST00000118570 BicraF8VPZ9 1578 aa32.44■■■□□ 2.78
Hmga1-204ENSMUST00000118570 Ccdc180J3QNE4 1664 aa32.26■■■□□ 2.75
Hmga1-204ENSMUST00000118570 Baz1aO88379 1555 aa32.23■■■□□ 2.75
Hmga1-204ENSMUST00000118570 Crybg2B7ZCC2 1516 aa32.12■■■□□ 2.73
Hmga1-204ENSMUST00000118570 Zcchc6Q5BLK4 1491 aaKnown RBP31.73■■■□□ 2.67
Hmga1-204ENSMUST00000118570 Pds5bQ4VA53 1446 aaKnown RBP31.49■■■□□ 2.63
Hmga1-204ENSMUST00000118570 Smarca2Q6DIC0 1577 aa31.32■■■□□ 2.6
Hmga1-204ENSMUST00000118570 Atad2bE9Q166 1460 aaKnown RBP31.25■■■□□ 2.59
Hmga1-204ENSMUST00000118570 Dnajc5bQ9CQ94 199 aa31.17■■■□□ 2.58
Hmga1-204ENSMUST00000118570 Rtl1Q7M732 1744 aa31.13■■■□□ 2.57
Hmga1-204ENSMUST00000118570 Cecr2E9Q2Z1 1453 aa31.13■■■□□ 2.57
Hmga1-204ENSMUST00000118570 Smarca4Q3TKT4 1613 aaKnown RBP31.08■■■□□ 2.57
Hmga1-204ENSMUST00000118570 Thoc2B1AZI6 1594 aaKnown RBP31.05■■■□□ 2.56
Hmga1-204ENSMUST00000118570 Iqgap2Q3UQ44 1575 aa30.87■■■□□ 2.53
Hmga1-204ENSMUST00000118570 Ercc6F8VPZ5 1481 aa30.79■■■□□ 2.52
Hmga1-204ENSMUST00000118570 Ccdc136Q3TVA9 1136 aa30.62■■■□□ 2.49
Hmga1-204ENSMUST00000118570 Cc2d2aQ8CFW7 1633 aa30.6■■■□□ 2.49
Hmga1-204ENSMUST00000118570 Wdr62Q3U3T8 1523 aa30.56■■■□□ 2.48
Hmga1-204ENSMUST00000118570 Frmpd1A2AKB4 1549 aa30.55■■■□□ 2.48
Hmga1-204ENSMUST00000118570 Brd4Q9ESU6 1400 aaKnown RBP30.49■■■□□ 2.47
Hmga1-204ENSMUST00000118570 CftrP26361 1476 aa30.48■■■□□ 2.47
Hmga1-204ENSMUST00000118570 Fam135aQ6NS59 1506 aa30.42■■■□□ 2.46
Hmga1-204ENSMUST00000118570 Synj1Q8CHC4 1574 aa30.41■■■□□ 2.46
Hmga1-204ENSMUST00000118570 Cttnbp2B9EJA2 1648 aa30.39■■■□□ 2.46
Hmga1-204ENSMUST00000118570 Phldb1Q6PDH0 1371 aaKnown RBP30.34■■■□□ 2.45
Hmga1-204ENSMUST00000118570 Trim41Q5NCC3 630 aa30.17■■■□□ 2.42
Hmga1-204ENSMUST00000118570 Unc13aQ4KUS2 1712 aa30.11■■■□□ 2.41
Hmga1-204ENSMUST00000118570 Baz1bQ9Z277 1479 aa30.1■■■□□ 2.41
Hmga1-204ENSMUST00000118570 Ubl4bQ9CQ84 188 aa30.08■■■□□ 2.41
Hmga1-204ENSMUST00000118570 Esf1Q3V1V3 845 aaKnown RBP30.02■■■□□ 2.4
Hmga1-204ENSMUST00000118570 Mrc2Q64449 1479 aa29.74■■■□□ 2.35
Hmga1-204ENSMUST00000118570 Rsf1E9PWW9 1441 aaKnown RBP29.65■■■□□ 2.34
Hmga1-204ENSMUST00000118570 Kif15Q6P9L6 1387 aa29.58■■■□□ 2.33
Hmga1-204ENSMUST00000118570 Golga3P55937 1487 aa29.52■■■□□ 2.32
Hmga1-204ENSMUST00000118570 Lamc3Q9R0B6 1581 aa29.5■■■□□ 2.31
Hmga1-204ENSMUST00000118570 Cux2P70298 1426 aa29.49■■■□□ 2.31
Hmga1-204ENSMUST00000118570 Top2bQ64511 1612 aa29.43■■■□□ 2.3
Hmga1-204ENSMUST00000118570 Cngb1E1AZ71 1325 aa29.42■■■□□ 2.3
Hmga1-204ENSMUST00000118570 Npm1Q61937 292 aaKnown RBP29.25■■■□□ 2.27
Hmga1-204ENSMUST00000118570 TnnQ80Z71 1560 aa29.23■■■□□ 2.27
Hmga1-204ENSMUST00000118570 HrcG5E8J6 738 aa29.18■■■□□ 2.26
Hmga1-204ENSMUST00000118570 Kif21aQ9QXL2 1672 aa29.14■■■□□ 2.25
Hmga1-204ENSMUST00000118570 Cep164Q5DU05 1446 aa29.13■■■□□ 2.25
Hmga1-204ENSMUST00000118570 Fmn1Q05860 1466 aa29.12■■■□□ 2.25
Hmga1-204ENSMUST00000118570 Ccdc18Q640L5 1455 aa29.09■■■□□ 2.25
Hmga1-204ENSMUST00000118570 Lrriq1Q0P5X1 1673 aa29.04■■■□□ 2.24
Hmga1-204ENSMUST00000118570 Il27Q8K3I6 234 aa29.04■■■□□ 2.24
Hmga1-204ENSMUST00000118570 Camsap1A2AHC3 1581 aa28.99■■■□□ 2.23
Hmga1-204ENSMUST00000118570 LrpprcQ6PB66 1392 aaKnown RBP28.92■■■□□ 2.22
Hmga1-204ENSMUST00000118570 Dhx29Q6PGC1 1365 aaKnown RBP28.89■■■□□ 2.22
Hmga1-204ENSMUST00000118570 Ccdc88bQ4QRL3 1481 aa28.82■■■□□ 2.2
Hmga1-204ENSMUST00000118570 PogzQ8BZH4 1409 aaKnown RBP28.75■■■□□ 2.19
Hmga1-204ENSMUST00000118570 Urb2E9Q7L1 1524 aaKnown RBP28.73■■■□□ 2.19
Hmga1-204ENSMUST00000118570 Plb1Q3TTY0 1478 aa28.73■■■□□ 2.19
Hmga1-204ENSMUST00000118570 Crocc2F6XLV1 1638 aa28.72■■■□□ 2.19
Hmga1-204ENSMUST00000118570 Chic1Q8CBW7 227 aa28.7■■■□□ 2.19
Hmga1-204ENSMUST00000118570 Grin2bQ01097 1482 aa28.66■■■□□ 2.18
Hmga1-204ENSMUST00000118570 Duox2A2AQ99 1517 aa28.63■■■□□ 2.17
Hmga1-204ENSMUST00000118570 Eif4g3Q80XI3 1579 aaKnown RBP28.62■■■□□ 2.17
Hmga1-204ENSMUST00000118570 Top2aQ01320 1528 aaKnown RBP28.61■■■□□ 2.17
Hmga1-204ENSMUST00000118570 Dnajc5P60904 198 aa28.56■■■□□ 2.16
Hmga1-204ENSMUST00000118570 Efcab5A0JP43 1406 aa28.5■■■□□ 2.15
Hmga1-204ENSMUST00000118570 Ift140E9PY46 1464 aa28.48■■■□□ 2.15
Hmga1-204ENSMUST00000118570 NrkQ9R0G8 1455 aa28.44■■■□□ 2.14
Hmga1-204ENSMUST00000118570 Samd9lQ69Z37 1561 aa28.36■■■□□ 2.13
Hmga1-204ENSMUST00000118570 Disp1Q3TDN0 1521 aa28.35■■■□□ 2.13
Hmga1-204ENSMUST00000118570 PtprkP35822 1457 aa28.3■■■□□ 2.12
Hmga1-204ENSMUST00000118570 Shroom4Q1W617 1475 aa28.28■■■□□ 2.12
Hmga1-204ENSMUST00000118570 Rusc2Q80U22 1514 aa28.28■■■□□ 2.12
Hmga1-204ENSMUST00000118570 Setd1bQ8CFT2 1985 aa28.21■■■□□ 2.11
Hmga1-204ENSMUST00000118570 Rad54l2Q99NG0 1466 aa28.2■■■□□ 2.11
Hmga1-204ENSMUST00000118570 Nup160Q9Z0W3 1402 aaKnown RBP28.2■■■□□ 2.1
Hmga1-204ENSMUST00000118570 Pbrm1Q8BSQ9 1634 aaKnown RBP28.18■■■□□ 2.1
Hmga1-204ENSMUST00000118570 Cc2d2bA0A286YDU8 1405 aa28.16■■■□□ 2.1
Hmga1-204ENSMUST00000118570 Shroom2A2ALU4 1481 aa28.13■■■□□ 2.09
Hmga1-204ENSMUST00000118570 Grin2aP35436 1464 aa28.1■■■□□ 2.09
Hmga1-204ENSMUST00000118570 Magi3Q9EQJ9 1476 aa28.1■■■□□ 2.09
Hmga1-204ENSMUST00000118570 Gab3Q8BSM5 595 aa28.07■■■□□ 2.08
Hmga1-204ENSMUST00000118570 Npm2Q80W85 207 aa28.06■■■□□ 2.08
Hmga1-204ENSMUST00000118570 SynmQ70IV5 1561 aa28.05■■■□□ 2.08
Hmga1-204ENSMUST00000118570 Zeb1Q64318 1117 aa28.04■■■□□ 2.08
Hmga1-204ENSMUST00000118570 Pabpn1Q8CCS6 302 aaKnown RBP27.97■■■□□ 2.07
Hmga1-204ENSMUST00000118570 Pla2r1Q62028 1487 aa27.96■■■□□ 2.07
Hmga1-204ENSMUST00000118570 Mroh2bQ7M6Y6 1581 aa27.95■■■□□ 2.07
Hmga1-204ENSMUST00000118570 AqrQ8CFQ3 1481 aaKnown RBP27.95■■■□□ 2.06
Hmga1-204ENSMUST00000118570 Rapgef2Q8CHG7 1496 aa27.91■■■□□ 2.06
Hmga1-204ENSMUST00000118570 Gpatch8A2A6A1 1505 aa27.89■■■□□ 2.05
Hmga1-204ENSMUST00000118570 Pelp1Q9DBD5 1123 aaKnown RBP27.83■■■□□ 2.04
Hmga1-204ENSMUST00000118570 Fgd6Q69ZL1 1399 aa27.81■■■□□ 2.04
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms