RNA–Protein interactions for RNA: ENSMUST00000103568.2

Trav2-201, Transcript of T cell receptor alpha variable 2 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav2, Length 325 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2-201ENSMUST00000103568 Dnajc5bQ9CQ94 199 aa11.6□□□□□ -0.55
Trav2-201ENSMUST00000103568 Dnajc5P60904 198 aa11.52□□□□□ -0.57
Trav2-201ENSMUST00000103568 Abcc9P70170 1546 aa11.37□□□□□ -0.59
Trav2-201ENSMUST00000103568 Gm35339A0A140LHH9 1649 aa11.31□□□□□ -0.6
Trav2-201ENSMUST00000103568 NischQ80TM9 1593 aa11.2□□□□□ -0.62
Trav2-201ENSMUST00000103568 Abcc8B2RUS7 1588 aa10.83□□□□□ -0.68
Trav2-201ENSMUST00000103568 Cypt1Q8CH20 168 aa10.7□□□□□ -0.7
Trav2-201ENSMUST00000103568 Trim41Q5NCC3 630 aa10.69□□□□□ -0.7
Trav2-201ENSMUST00000103568 ScribQ80U72 1612 aa10.51□□□□□ -0.73
Trav2-201ENSMUST00000103568 Thoc2B1AZI6 1594 aaKnown RBP10.2□□□□□ -0.78
Trav2-201ENSMUST00000103568 NacadQ5SWP3 1504 aa10.1□□□□□ -0.79
Trav2-201ENSMUST00000103568 Kdm5dQ62240 1548 aa10.08□□□□□ -0.8
Trav2-201ENSMUST00000103568 Pcdh10E9PXQ7 1057 aa10.03□□□□□ -0.8
Trav2-201ENSMUST00000103568 Cc2d2aQ8CFW7 1633 aa10□□□□□ -0.81
Trav2-201ENSMUST00000103568 Dcaf1Q80TR8 1506 aa9.98□□□□□ -0.81
Trav2-201ENSMUST00000103568 Col17a1Q07563 1470 aa9.97□□□□□ -0.81
Trav2-201ENSMUST00000103568 BicraF8VPZ9 1578 aa9.96□□□□□ -0.82
Trav2-201ENSMUST00000103568 Sycp2Q9CUU3 1500 aa9.9□□□□□ -0.82
Trav2-201ENSMUST00000103568 Pds5bQ4VA53 1446 aaKnown RBP9.86□□□□□ -0.83
Trav2-201ENSMUST00000103568 Shroom2A2ALU4 1481 aa9.8□□□□□ -0.84
Trav2-201ENSMUST00000103568 Rb1cc1Q9ESK9 1588 aa9.76□□□□□ -0.85
Trav2-201ENSMUST00000103568 Rhox8Q6VSS7 320 aa9.73□□□□□ -0.85
Trav2-201ENSMUST00000103568 Fam135aQ6NS59 1506 aa9.72□□□□□ -0.85
Trav2-201ENSMUST00000103568 Baz1aO88379 1555 aa9.63□□□□□ -0.87
Trav2-201ENSMUST00000103568 Ccdc180J3QNE4 1664 aa9.61□□□□□ -0.87
Trav2-201ENSMUST00000103568 Crybg2B7ZCC2 1516 aa9.61□□□□□ -0.87
Trav2-201ENSMUST00000103568 Ercc6F8VPZ5 1481 aa9.59□□□□□ -0.87
Trav2-201ENSMUST00000103568 Fbxo41Q6NS60 873 aa9.56□□□□□ -0.88
Trav2-201ENSMUST00000103568 Plekhg3Q4VAC9 1341 aa9.56□□□□□ -0.88
Trav2-201ENSMUST00000103568 Atad2bE9Q166 1460 aaKnown RBP9.55□□□□□ -0.88
Trav2-201ENSMUST00000103568 Pabpn1Q8CCS6 302 aaKnown RBP9.55□□□□□ -0.88
Trav2-201ENSMUST00000103568 Baz1bQ9Z277 1479 aa9.54□□□□□ -0.88
Trav2-201ENSMUST00000103568 Mrc2Q64449 1479 aa9.52□□□□□ -0.89
Trav2-201ENSMUST00000103568 Arhgef5E9Q7D5 1581 aa9.5□□□□□ -0.89
Trav2-201ENSMUST00000103568 Zcchc6Q5BLK4 1491 aaKnown RBP9.5□□□□□ -0.89
Trav2-201ENSMUST00000103568 Ubl4bQ9CQ84 188 aa9.49□□□□□ -0.89
Trav2-201ENSMUST00000103568 Phldb1Q6PDH0 1371 aaKnown RBP9.46□□□□□ -0.9
Trav2-201ENSMUST00000103568 Rsf1E9PWW9 1441 aaKnown RBP9.44□□□□□ -0.9
Trav2-201ENSMUST00000103568 Top2bQ64511 1612 aa9.42□□□□□ -0.9
Trav2-201ENSMUST00000103568 GapdhsQ64467 440 aa9.4□□□□□ -0.9
Trav2-201ENSMUST00000103568 Zcchc11B2RX14 1644 aaKnown RBP9.39□□□□□ -0.91
Trav2-201ENSMUST00000103568 Pelp1Q9DBD5 1123 aaKnown RBP9.38□□□□□ -0.91
Trav2-201ENSMUST00000103568 Smarca2Q6DIC0 1577 aa9.36□□□□□ -0.91
Trav2-201ENSMUST00000103568 Lrriq1Q0P5X1 1673 aa9.36□□□□□ -0.91
Trav2-201ENSMUST00000103568 Ttbk1Q6PCN3 1308 aa9.35□□□□□ -0.91
Trav2-201ENSMUST00000103568 Smarca4Q3TKT4 1613 aaKnown RBP9.33□□□□□ -0.92
Trav2-201ENSMUST00000103568 Cecr2E9Q2Z1 1453 aa9.31□□□□□ -0.92
Trav2-201ENSMUST00000103568 Frmpd1A2AKB4 1549 aa9.27□□□□□ -0.93
Trav2-201ENSMUST00000103568 Iqgap2Q3UQ44 1575 aa9.27□□□□□ -0.93
Trav2-201ENSMUST00000103568 Cyb5rlB1AS42 316 aa9.24□□□□□ -0.93
Trav2-201ENSMUST00000103568 Slc34a2Q9DBP0 697 aa9.24□□□□□ -0.93
Trav2-201ENSMUST00000103568 Wdr62Q3U3T8 1523 aa9.23□□□□□ -0.93
Trav2-201ENSMUST00000103568 Rtl1Q7M732 1744 aa9.19□□□□□ -0.94
Trav2-201ENSMUST00000103568 Adgrl3Q80TS3 1537 aa9.18□□□□□ -0.94
Trav2-201ENSMUST00000103568 Eif4g3Q80XI3 1579 aaKnown RBP9.18□□□□□ -0.94
Trav2-201ENSMUST00000103568 PtprtQ99M80 1454 aa9.15□□□□□ -0.94
Trav2-201ENSMUST00000103568 Hecw2Q6I6G8 1578 aa9.13□□□□□ -0.95
Trav2-201ENSMUST00000103568 Ercc6l2Q9JIM3 1537 aa9.13□□□□□ -0.95
Trav2-201ENSMUST00000103568 CftrP26361 1476 aa9.12□□□□□ -0.95
Trav2-201ENSMUST00000103568 Brd4Q9ESU6 1400 aaKnown RBP9.12□□□□□ -0.95
Trav2-201ENSMUST00000103568 Ccdc136Q3TVA9 1136 aa9.1□□□□□ -0.95
Trav2-201ENSMUST00000103568 Cttnbp2B9EJA2 1648 aa9.09□□□□□ -0.95
Trav2-201ENSMUST00000103568 Synj1Q8CHC4 1574 aa9.09□□□□□ -0.95
Trav2-201ENSMUST00000103568 Gm156Q58A37 223 aa9.07□□□□□ -0.96
Trav2-201ENSMUST00000103568 Ecm2Q5FW85 670 aa9.07□□□□□ -0.96
Trav2-201ENSMUST00000103568 Unc13aQ4KUS2 1712 aa9□□□□□ -0.97
Trav2-201ENSMUST00000103568 Plb1Q3TTY0 1478 aa8.98□□□□□ -0.97
Trav2-201ENSMUST00000103568 Esf1Q3V1V3 845 aaKnown RBP8.97□□□□□ -0.97
Trav2-201ENSMUST00000103568 Alpk3Q924C5 1678 aa8.97□□□□□ -0.97
Trav2-201ENSMUST00000103568 PtprkP35822 1457 aa8.96□□□□□ -0.98
Trav2-201ENSMUST00000103568 Pprc1Q6NZN1 1644 aa8.94□□□□□ -0.98
Trav2-201ENSMUST00000103568 Kif21aQ9QXL2 1672 aa8.91□□□□□ -0.98
Trav2-201ENSMUST00000103568 Cep170Q6A065 1588 aa8.9□□□□□ -0.99
Trav2-201ENSMUST00000103568 Kif7B7ZNG0 1348 aa8.89□□□□□ -0.99
Trav2-201ENSMUST00000103568 Kif15Q6P9L6 1387 aa8.87□□□□□ -0.99
Trav2-201ENSMUST00000103568 MlecQ6ZQI3 291 aaKnown RBP8.87□□□□□ -0.99
Trav2-201ENSMUST00000103568 Cux2P70298 1426 aa8.86□□□□□ -0.99
Trav2-201ENSMUST00000103568 Plppr3Q7TPB0 716 aa8.85□□□□□ -0.99
Trav2-201ENSMUST00000103568 Urb2E9Q7L1 1524 aaKnown RBP8.84□□□□□ -0.99
Trav2-201ENSMUST00000103568 Gapvd1Q6PAR5 1458 aa8.83□□□□□ -1
Trav2-201ENSMUST00000103568 Lamc3Q9R0B6 1581 aa8.83□□□□□ -1
Trav2-201ENSMUST00000103568 Ppp1r18Q8BQ30 594 aa8.83□□□□□ -1
Trav2-201ENSMUST00000103568 Ccdc88bQ4QRL3 1481 aa8.83□□□□□ -1
Trav2-201ENSMUST00000103568 Golga3P55937 1487 aa8.81□□□□□ -1
Trav2-201ENSMUST00000103568 Brwd3A2AHJ4 1799 aa8.79□□□□□ -1
Trav2-201ENSMUST00000103568 Npm1Q61937 292 aaKnown RBP8.78□□□□□ -1
Trav2-201ENSMUST00000103568 Cngb1E1AZ71 1325 aa8.77□□□□□ -1.01
Trav2-201ENSMUST00000103568 Dnajc5gQ8C632 165 aa8.76□□□□□ -1.01
Trav2-201ENSMUST00000103568 Cep164Q5DU05 1446 aa8.75□□□□□ -1.01
Trav2-201ENSMUST00000103568 Rusc2Q80U22 1514 aa8.75□□□□□ -1.01
Trav2-201ENSMUST00000103568 TnnQ80Z71 1560 aa8.74□□□□□ -1.01
Trav2-201ENSMUST00000103568 Ccdc18Q640L5 1455 aa8.72□□□□□ -1.01
Trav2-201ENSMUST00000103568 Rapgef2Q8CHG7 1496 aa8.7□□□□□ -1.02
Trav2-201ENSMUST00000103568 Fmn1Q05860 1466 aa8.7□□□□□ -1.02
Trav2-201ENSMUST00000103568 Il27Q8K3I6 234 aa8.69□□□□□ -1.02
Trav2-201ENSMUST00000103568 Dhx29Q6PGC1 1365 aaKnown RBP8.68□□□□□ -1.02
Trav2-201ENSMUST00000103568 Camsap1A2AHC3 1581 aa8.68□□□□□ -1.02
Trav2-201ENSMUST00000103568 LrpprcQ6PB66 1392 aaKnown RBP8.67□□□□□ -1.02
Trav2-201ENSMUST00000103568 Arhgef11Q68FM7 1552 aa8.65□□□□□ -1.02
Trav2-201ENSMUST00000103568 Setbp1Q9Z180 1582 aa8.65□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 81 ms