RNA–Protein interactions for RNA: ENSMUST00000093346.5

H2afv-201, Transcript of Histone H2A.V, mousemouse

TSL 1 (best) BASIC

Gene H2afv, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-201ENSMUST00000093346 Gm35339A0A140LHH9 1649 aa29.45■■■□□ 2.31
H2afv-201ENSMUST00000093346 NischQ80TM9 1593 aa29.12■■■□□ 2.25
H2afv-201ENSMUST00000093346 Abcc9P70170 1546 aa28.23■■■□□ 2.11
H2afv-201ENSMUST00000093346 Abcc8B2RUS7 1588 aa28.1■■■□□ 2.09
H2afv-201ENSMUST00000093346 ScribQ80U72 1612 aa26.98■■□□□ 1.91
H2afv-201ENSMUST00000093346 NacadQ5SWP3 1504 aa26.19■■□□□ 1.78
H2afv-201ENSMUST00000093346 Kdm5dQ62240 1548 aa26.15■■□□□ 1.78
H2afv-201ENSMUST00000093346 Dcaf1Q80TR8 1506 aa25.96■■□□□ 1.75
H2afv-201ENSMUST00000093346 Sycp2Q9CUU3 1500 aa25.66■■□□□ 1.7
H2afv-201ENSMUST00000093346 Rb1cc1Q9ESK9 1588 aa25.41■■□□□ 1.66
H2afv-201ENSMUST00000093346 Rhox8Q6VSS7 320 aa25.29■■□□□ 1.64
H2afv-201ENSMUST00000093346 BicraF8VPZ9 1578 aa25.24■■□□□ 1.63
H2afv-201ENSMUST00000093346 Ccdc180J3QNE4 1664 aa25.11■■□□□ 1.61
H2afv-201ENSMUST00000093346 Baz1aO88379 1555 aa25.07■■□□□ 1.6
H2afv-201ENSMUST00000093346 Crybg2B7ZCC2 1516 aa24.96■■□□□ 1.59
H2afv-201ENSMUST00000093346 Zcchc6Q5BLK4 1491 aaKnown RBP24.65■■□□□ 1.54
H2afv-201ENSMUST00000093346 Pds5bQ4VA53 1446 aaKnown RBP24.55■■□□□ 1.52
H2afv-201ENSMUST00000093346 Smarca2Q6DIC0 1577 aa24.35■■□□□ 1.49
H2afv-201ENSMUST00000093346 Atad2bE9Q166 1460 aaKnown RBP24.35■■□□□ 1.49
H2afv-201ENSMUST00000093346 Thoc2B1AZI6 1594 aaKnown RBP24.28■■□□□ 1.48
H2afv-201ENSMUST00000093346 Smarca4Q3TKT4 1613 aaKnown RBP24.21■■□□□ 1.47
H2afv-201ENSMUST00000093346 Dnajc5bQ9CQ94 199 aa24.19■■□□□ 1.46
H2afv-201ENSMUST00000093346 Cecr2E9Q2Z1 1453 aa24.14■■□□□ 1.46
H2afv-201ENSMUST00000093346 Rtl1Q7M732 1744 aa24.11■■□□□ 1.45
H2afv-201ENSMUST00000093346 Ercc6F8VPZ5 1481 aa24.07■■□□□ 1.44
H2afv-201ENSMUST00000093346 Iqgap2Q3UQ44 1575 aa24.06■■□□□ 1.44
H2afv-201ENSMUST00000093346 Cc2d2aQ8CFW7 1633 aa23.86■■□□□ 1.41
H2afv-201ENSMUST00000093346 Wdr62Q3U3T8 1523 aa23.84■■□□□ 1.41
H2afv-201ENSMUST00000093346 Fam135aQ6NS59 1506 aa23.78■■□□□ 1.4
H2afv-201ENSMUST00000093346 Frmpd1A2AKB4 1549 aa23.77■■□□□ 1.4
H2afv-201ENSMUST00000093346 Brd4Q9ESU6 1400 aaKnown RBP23.69■■□□□ 1.38
H2afv-201ENSMUST00000093346 Cttnbp2B9EJA2 1648 aa23.67■■□□□ 1.38
H2afv-201ENSMUST00000093346 CftrP26361 1476 aa23.67■■□□□ 1.38
H2afv-201ENSMUST00000093346 Synj1Q8CHC4 1574 aa23.63■■□□□ 1.37
H2afv-201ENSMUST00000093346 Phldb1Q6PDH0 1371 aaKnown RBP23.62■■□□□ 1.37
H2afv-201ENSMUST00000093346 Ccdc136Q3TVA9 1136 aa23.6■■□□□ 1.37
H2afv-201ENSMUST00000093346 Baz1bQ9Z277 1479 aa23.58■■□□□ 1.37
H2afv-201ENSMUST00000093346 Unc13aQ4KUS2 1712 aa23.42■■□□□ 1.34
H2afv-201ENSMUST00000093346 Ubl4bQ9CQ84 188 aa23.34■■□□□ 1.33
H2afv-201ENSMUST00000093346 Trim41Q5NCC3 630 aa23.32■■□□□ 1.32
H2afv-201ENSMUST00000093346 Esf1Q3V1V3 845 aaKnown RBP23.24■■□□□ 1.31
H2afv-201ENSMUST00000093346 Mrc2Q64449 1479 aa23.22■■□□□ 1.31
H2afv-201ENSMUST00000093346 Rsf1E9PWW9 1441 aaKnown RBP23.07■■□□□ 1.28
H2afv-201ENSMUST00000093346 Kif15Q6P9L6 1387 aa22.98■■□□□ 1.27
H2afv-201ENSMUST00000093346 Lamc3Q9R0B6 1581 aa22.96■■□□□ 1.27
H2afv-201ENSMUST00000093346 Cux2P70298 1426 aa22.93■■□□□ 1.26
H2afv-201ENSMUST00000093346 Golga3P55937 1487 aa22.9■■□□□ 1.26
H2afv-201ENSMUST00000093346 Top2bQ64511 1612 aa22.85■■□□□ 1.25
H2afv-201ENSMUST00000093346 TnnQ80Z71 1560 aa22.76■■□□□ 1.23
H2afv-201ENSMUST00000093346 Cngb1E1AZ71 1325 aa22.75■■□□□ 1.23
H2afv-201ENSMUST00000093346 Kif21aQ9QXL2 1672 aa22.71■■□□□ 1.23
H2afv-201ENSMUST00000093346 Npm1Q61937 292 aaKnown RBP22.69■■□□□ 1.22
H2afv-201ENSMUST00000093346 Cep164Q5DU05 1446 aa22.67■■□□□ 1.22
H2afv-201ENSMUST00000093346 Lrriq1Q0P5X1 1673 aa22.67■■□□□ 1.22
H2afv-201ENSMUST00000093346 Ccdc18Q640L5 1455 aa22.64■■□□□ 1.21
H2afv-201ENSMUST00000093346 Fmn1Q05860 1466 aa22.63■■□□□ 1.21
H2afv-201ENSMUST00000093346 Camsap1A2AHC3 1581 aa22.56■■□□□ 1.2
H2afv-201ENSMUST00000093346 Il27Q8K3I6 234 aa22.48■■□□□ 1.19
H2afv-201ENSMUST00000093346 Dhx29Q6PGC1 1365 aaKnown RBP22.47■■□□□ 1.19
H2afv-201ENSMUST00000093346 LrpprcQ6PB66 1392 aaKnown RBP22.46■■□□□ 1.19
H2afv-201ENSMUST00000093346 Crocc2F6XLV1 1638 aa22.39■■□□□ 1.17
H2afv-201ENSMUST00000093346 Eif4g3Q80XI3 1579 aaKnown RBP22.38■■□□□ 1.17
H2afv-201ENSMUST00000093346 Urb2E9Q7L1 1524 aaKnown RBP22.36■■□□□ 1.17
H2afv-201ENSMUST00000093346 PogzQ8BZH4 1409 aaKnown RBP22.35■■□□□ 1.17
H2afv-201ENSMUST00000093346 Plb1Q3TTY0 1478 aa22.34■■□□□ 1.17
H2afv-201ENSMUST00000093346 Ccdc88bQ4QRL3 1481 aa22.28■■□□□ 1.16
H2afv-201ENSMUST00000093346 Grin2bQ01097 1482 aa22.27■■□□□ 1.16
H2afv-201ENSMUST00000093346 Duox2A2AQ99 1517 aa22.23■■□□□ 1.15
H2afv-201ENSMUST00000093346 Top2aQ01320 1528 aaKnown RBP22.21■■□□□ 1.15
H2afv-201ENSMUST00000093346 Ift140E9PY46 1464 aa22.21■■□□□ 1.15
H2afv-201ENSMUST00000093346 Efcab5A0JP43 1406 aa22.12■■□□□ 1.13
H2afv-201ENSMUST00000093346 Chic1Q8CBW7 227 aa22.09■■□□□ 1.13
H2afv-201ENSMUST00000093346 Rusc2Q80U22 1514 aa22.09■■□□□ 1.13
H2afv-201ENSMUST00000093346 NrkQ9R0G8 1455 aa22.08■■□□□ 1.12
H2afv-201ENSMUST00000093346 Samd9lQ69Z37 1561 aa22.07■■□□□ 1.12
H2afv-201ENSMUST00000093346 Disp1Q3TDN0 1521 aa22.03■■□□□ 1.12
H2afv-201ENSMUST00000093346 Pbrm1Q8BSQ9 1634 aaKnown RBP22.02■■□□□ 1.11
H2afv-201ENSMUST00000093346 Shroom2A2ALU4 1481 aa22.01■■□□□ 1.11
H2afv-201ENSMUST00000093346 Shroom4Q1W617 1475 aa21.98■■□□□ 1.11
H2afv-201ENSMUST00000093346 Nup160Q9Z0W3 1402 aaKnown RBP21.96■■□□□ 1.11
H2afv-201ENSMUST00000093346 Cc2d2bA0A286YDU8 1405 aa21.92■■□□□ 1.1
H2afv-201ENSMUST00000093346 PtprkP35822 1457 aa21.9■■□□□ 1.1
H2afv-201ENSMUST00000093346 Rad54l2Q99NG0 1466 aa21.89■■□□□ 1.09
H2afv-201ENSMUST00000093346 HrcG5E8J6 738 aa21.87■■□□□ 1.09
H2afv-201ENSMUST00000093346 Grin2aP35436 1464 aa21.86■■□□□ 1.09
H2afv-201ENSMUST00000093346 Magi3Q9EQJ9 1476 aa21.86■■□□□ 1.09
H2afv-201ENSMUST00000093346 SynmQ70IV5 1561 aa21.82■■□□□ 1.08
H2afv-201ENSMUST00000093346 Setd1bQ8CFT2 1985 aa21.82■■□□□ 1.08
H2afv-201ENSMUST00000093346 Gpatch8A2A6A1 1505 aa21.8■■□□□ 1.08
H2afv-201ENSMUST00000093346 AqrQ8CFQ3 1481 aaKnown RBP21.79■■□□□ 1.08
H2afv-201ENSMUST00000093346 Dnajc5P60904 198 aa21.78■■□□□ 1.08
H2afv-201ENSMUST00000093346 Pabpn1Q8CCS6 302 aaKnown RBP21.76■■□□□ 1.07
H2afv-201ENSMUST00000093346 Pla2r1Q62028 1487 aa21.75■■□□□ 1.07
H2afv-201ENSMUST00000093346 Zeb1Q64318 1117 aa21.73■■□□□ 1.07
H2afv-201ENSMUST00000093346 Npm2Q80W85 207 aa21.71■■□□□ 1.07
H2afv-201ENSMUST00000093346 Mroh2bQ7M6Y6 1581 aa21.68■■□□□ 1.06
H2afv-201ENSMUST00000093346 Pelp1Q9DBD5 1123 aaKnown RBP21.66■■□□□ 1.06
H2afv-201ENSMUST00000093346 Fgd6Q69ZL1 1399 aa21.65■■□□□ 1.06
H2afv-201ENSMUST00000093346 Col17a1Q07563 1470 aa21.61■■□□□ 1.05
H2afv-201ENSMUST00000093346 Rapgef2Q8CHG7 1496 aa21.59■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 65.1 ms