RNA–Protein interactions for RNA: ENSMUST00000060992.5

Rtn4-201, Transcript of Reticulon-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtn4, Length 1,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-201ENSMUST00000060992 NischQ80TM9 1593 aa27.21■■□□□ 1.95
Rtn4-201ENSMUST00000060992 Gm35339A0A140LHH9 1649 aa26.78■■□□□ 1.88
Rtn4-201ENSMUST00000060992 Abcc9P70170 1546 aa26.58■■□□□ 1.85
Rtn4-201ENSMUST00000060992 Rtl1Q7M732 1744 aa26.38■■□□□ 1.81
Rtn4-201ENSMUST00000060992 Ccdc180J3QNE4 1664 aa25.86■■□□□ 1.73
Rtn4-201ENSMUST00000060992 Abcc8B2RUS7 1588 aa25.75■■□□□ 1.71
Rtn4-201ENSMUST00000060992 Rpgrip1Q9EPQ2 1331 aa25.71■■□□□ 1.71
Rtn4-201ENSMUST00000060992 Rhox8Q6VSS7 320 aa25.35■■□□□ 1.65
Rtn4-201ENSMUST00000060992 Zcchc6Q5BLK4 1491 aaKnown RBP24.89■■□□□ 1.58
Rtn4-201ENSMUST00000060992 Acin1Q9JIX8 1338 aaKnown RBP24.64■■□□□ 1.54
Rtn4-201ENSMUST00000060992 HrcG5E8J6 738 aa24.53■■□□□ 1.52
Rtn4-201ENSMUST00000060992 Dcaf1Q80TR8 1506 aa24.51■■□□□ 1.51
Rtn4-201ENSMUST00000060992 Rb1cc1Q9ESK9 1588 aa23.86■■□□□ 1.41
Rtn4-201ENSMUST00000060992 Baz1aO88379 1555 aa23.74■■□□□ 1.39
Rtn4-201ENSMUST00000060992 Pcgf6Q99NA9 353 aa23.74■■□□□ 1.39
Rtn4-201ENSMUST00000060992 ScribQ80U72 1612 aa23.56■■□□□ 1.36
Rtn4-201ENSMUST00000060992 Cep164Q5DU05 1446 aa23.5■■□□□ 1.35
Rtn4-201ENSMUST00000060992 Crybg2B7ZCC2 1516 aa23.5■■□□□ 1.35
Rtn4-201ENSMUST00000060992 Trim41Q5NCC3 630 aa23.49■■□□□ 1.35
Rtn4-201ENSMUST00000060992 Ccdc136Q3TVA9 1136 aa23.34■■□□□ 1.33
Rtn4-201ENSMUST00000060992 Ehmt2Q9Z148 1263 aaKnown RBP23.34■■□□□ 1.33
Rtn4-201ENSMUST00000060992 Myt1Q8CFC2 1127 aa23.32■■□□□ 1.32
Rtn4-201ENSMUST00000060992 Kdm5dQ62240 1548 aa23.29■■□□□ 1.32
Rtn4-201ENSMUST00000060992 Smarca2Q6DIC0 1577 aa23.25■■□□□ 1.31
Rtn4-201ENSMUST00000060992 NacadQ5SWP3 1504 aa23.21■■□□□ 1.31
Rtn4-201ENSMUST00000060992 NefmP08553 848 aa23.06■■□□□ 1.28
Rtn4-201ENSMUST00000060992 Supt5hO55201 1082 aaKnown RBP23.02■■□□□ 1.28
Rtn4-201ENSMUST00000060992 Las1lA2BE28 776 aaKnown RBP22.94■■□□□ 1.26
Rtn4-201ENSMUST00000060992 Cngb1E1AZ71 1325 aa22.88■■□□□ 1.25
Rtn4-201ENSMUST00000060992 DiexfQ8BTT6 772 aaKnown RBP22.85■■□□□ 1.25
Rtn4-201ENSMUST00000060992 Brd4Q9ESU6 1400 aaKnown RBP22.76■■□□□ 1.23
Rtn4-201ENSMUST00000060992 Neurod1Q60867 357 aa22.73■■□□□ 1.23
Rtn4-201ENSMUST00000060992 Rsf1E9PWW9 1441 aaKnown RBP22.71■■□□□ 1.23
Rtn4-201ENSMUST00000060992 Golga3P55937 1487 aa22.64■■□□□ 1.22
Rtn4-201ENSMUST00000060992 Sycp2Q9CUU3 1500 aa22.63■■□□□ 1.21
Rtn4-201ENSMUST00000060992 Anks4bQ8K3X6 423 aa22.54■■□□□ 1.2
Rtn4-201ENSMUST00000060992 Mier1Q5UAK0 511 aa22.51■■□□□ 1.19
Rtn4-201ENSMUST00000060992 Chic1Q8CBW7 227 aa22.49■■□□□ 1.19
Rtn4-201ENSMUST00000060992 CenpbP27790 599 aa22.48■■□□□ 1.19
Rtn4-201ENSMUST00000060992 Ccdc88bQ4QRL3 1481 aa22.43■■□□□ 1.18
Rtn4-201ENSMUST00000060992 Zeb1Q64318 1117 aa22.38■■□□□ 1.17
Rtn4-201ENSMUST00000060992 Sall2Q9QX96 1004 aa22.36■■□□□ 1.17
Rtn4-201ENSMUST00000060992 Top2bQ64511 1612 aa22.35■■□□□ 1.17
Rtn4-201ENSMUST00000060992 Synj1Q8CHC4 1574 aa22.28■■□□□ 1.16
Rtn4-201ENSMUST00000060992 Gab3Q8BSM5 595 aa22.24■■□□□ 1.15
Rtn4-201ENSMUST00000060992 Cecr2E9Q2Z1 1453 aa22.22■■□□□ 1.15
Rtn4-201ENSMUST00000060992 CftrP26361 1476 aa22.19■■□□□ 1.14
Rtn4-201ENSMUST00000060992 Rapgef2Q8CHG7 1496 aa22.17■■□□□ 1.14
Rtn4-201ENSMUST00000060992 Amer1Q7TS75 1132 aa22.17■■□□□ 1.14
Rtn4-201ENSMUST00000060992 Aplp2Q06335 707 aa22.16■■□□□ 1.14
Rtn4-201ENSMUST00000060992 ClspnQ80YR7 1315 aa22.15■■□□□ 1.14
Rtn4-201ENSMUST00000060992 Cttnbp2B9EJA2 1648 aa22.13■■□□□ 1.13
Rtn4-201ENSMUST00000060992 1700123L14RikQ3V2K7 440 aa22.08■■□□□ 1.13
Rtn4-201ENSMUST00000060992 Cdk11bP24788 784 aaKnown RBP22.06■■□□□ 1.12
Rtn4-201ENSMUST00000060992 Bcl11aQ9QYE3 773 aa22.04■■□□□ 1.12
Rtn4-201ENSMUST00000060992 Fmn1Q05860 1466 aa22.01■■□□□ 1.11
Rtn4-201ENSMUST00000060992 CatipB9EKE5 520 aa21.96■■□□□ 1.11
Rtn4-201ENSMUST00000060992 Top2aQ01320 1528 aaKnown RBP21.96■■□□□ 1.11
Rtn4-201ENSMUST00000060992 Nop58Q6DFW4 536 aaKnown RBP21.95■■□□□ 1.1
Rtn4-201ENSMUST00000060992 BicraF8VPZ9 1578 aa21.91■■□□□ 1.1
Rtn4-201ENSMUST00000060992 Csrnp3P59055 597 aa21.9■■□□□ 1.1
Rtn4-201ENSMUST00000060992 Cep162Q6ZQ06 1403 aa21.88■■□□□ 1.09
Rtn4-201ENSMUST00000060992 Wdr66E9Q743 1299 aa21.86■■□□□ 1.09
Rtn4-201ENSMUST00000060992 Cc2d2aQ8CFW7 1633 aa21.85■■□□□ 1.09
Rtn4-201ENSMUST00000060992 Esf1Q3V1V3 845 aaKnown RBP21.84■■□□□ 1.09
Rtn4-201ENSMUST00000060992 Aebp2Q9Z248 504 aaKnown RBP21.83■■□□□ 1.09
Rtn4-201ENSMUST00000060992 TonslQ6NZL6 1363 aa21.81■■□□□ 1.08
Rtn4-201ENSMUST00000060992 Smarca4Q3TKT4 1613 aaKnown RBP21.79■■□□□ 1.08
Rtn4-201ENSMUST00000060992 UbtfP25976 765 aaKnown RBP21.79■■□□□ 1.08
Rtn4-201ENSMUST00000060992 Eif4g1Q6NZJ6 1600 aaKnown RBP21.77■■□□□ 1.07
Rtn4-201ENSMUST00000060992 Ncapd3Q6ZQK0 1506 aa21.73■■□□□ 1.07
Rtn4-201ENSMUST00000060992 Tnnt3Q9QZ47 272 aa21.66■■□□□ 1.06
Rtn4-201ENSMUST00000060992 Clip1Q922J3 1391 aa21.59■■□□□ 1.05
Rtn4-201ENSMUST00000060992 Ccdc18Q640L5 1455 aa21.55■■□□□ 1.04
Rtn4-201ENSMUST00000060992 TnnQ80Z71 1560 aa21.48■■□□□ 1.03
Rtn4-201ENSMUST00000060992 Kdm5bQ80Y84 1544 aa21.45■■□□□ 1.02
Rtn4-201ENSMUST00000060992 TchhA0A0B4J1F9 1599 aa21.45■■□□□ 1.02
Rtn4-201ENSMUST00000060992 NrkQ9R0G8 1455 aa21.39■■□□□ 1.01
Rtn4-201ENSMUST00000060992 Eea1Q8BL66 1411 aa21.38■■□□□ 1.01
Rtn4-201ENSMUST00000060992 Map3k1P53349 1493 aa21.35■■□□□ 1.01
Rtn4-201ENSMUST00000060992 Iqgap2Q3UQ44 1575 aa21.35■■□□□ 1.01
Rtn4-201ENSMUST00000060992 Stra8P70278 393 aa21.34■■□□□ 1.01
Rtn4-201ENSMUST00000060992 Myt1lP97500 1187 aa21.34■■□□□ 1.01
Rtn4-201ENSMUST00000060992 Npm2Q80W85 207 aa21.34■■□□□ 1.01
Rtn4-201ENSMUST00000060992 Arhgap35Q91YM2 1499 aa21.33■■□□□ 1.01
Rtn4-201ENSMUST00000060992 Arhgef5E9Q7D5 1581 aa21.33■■□□□ 1
Rtn4-201ENSMUST00000060992 Arap1Q4LDD4 1452 aa21.25■□□□□ 0.99
Rtn4-201ENSMUST00000060992 Baz1bQ9Z277 1479 aa21.23■□□□□ 0.99
Rtn4-201ENSMUST00000060992 Plekhg3Q4VAC9 1341 aa21.22■□□□□ 0.99
Rtn4-201ENSMUST00000060992 PrkcshO08795 521 aa21.22■□□□□ 0.99
Rtn4-201ENSMUST00000060992 Atad2bE9Q166 1460 aaKnown RBP21.21■□□□□ 0.99
Rtn4-201ENSMUST00000060992 Rtl5Q5DTT4 599 aa21.2■□□□□ 0.98
Rtn4-201ENSMUST00000060992 Tiam1Q60610 1591 aa21.2■□□□□ 0.98
Rtn4-201ENSMUST00000060992 UacaQ8CGB3 1411 aa21.18■□□□□ 0.98
Rtn4-201ENSMUST00000060992 Ccer2J3QPU5 274 aa21.15■□□□□ 0.98
Rtn4-201ENSMUST00000060992 Erich3F6QRE9 1637 aa21.15■□□□□ 0.98
Rtn4-201ENSMUST00000060992 Shroom4Q1W617 1475 aa21.14■□□□□ 0.97
Rtn4-201ENSMUST00000060992 Camsap2Q8C1B1 1461 aa21.12■□□□□ 0.97
Rtn4-201ENSMUST00000060992 Lamc3Q9R0B6 1581 aa21.11■□□□□ 0.97
Rtn4-201ENSMUST00000060992 Ankrd36D3Z4K0 1415 aa21.11■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms