RNA–Protein interactions for RNA: ENSMUST00000037907.12

Ddx58-201, Transcript of Probable ATP-dependent RNA helicase DDX58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx58, Length 3,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58-201ENSMUST00000037907 NischQ80TM9 1593 aa12.59□□□□□ -0.39
Ddx58-201ENSMUST00000037907 Gm35339A0A140LHH9 1649 aa12.25□□□□□ -0.45
Ddx58-201ENSMUST00000037907 Abcc9P70170 1546 aa12.06□□□□□ -0.48
Ddx58-201ENSMUST00000037907 Abcc8B2RUS7 1588 aa11.98□□□□□ -0.49
Ddx58-201ENSMUST00000037907 Rhox8Q6VSS7 320 aa11.87□□□□□ -0.51
Ddx58-201ENSMUST00000037907 ScribQ80U72 1612 aa11.34□□□□□ -0.59
Ddx58-201ENSMUST00000037907 Kdm5dQ62240 1548 aa11.15□□□□□ -0.62
Ddx58-201ENSMUST00000037907 NacadQ5SWP3 1504 aa11.14□□□□□ -0.63
Ddx58-201ENSMUST00000037907 Rb1cc1Q9ESK9 1588 aa11.01□□□□□ -0.65
Ddx58-201ENSMUST00000037907 Ccdc136Q3TVA9 1136 aa11□□□□□ -0.65
Ddx58-201ENSMUST00000037907 Zcchc6Q5BLK4 1491 aaKnown RBP10.96□□□□□ -0.65
Ddx58-201ENSMUST00000037907 Dcaf1Q80TR8 1506 aa10.93□□□□□ -0.66
Ddx58-201ENSMUST00000037907 Sycp2Q9CUU3 1500 aa10.87□□□□□ -0.67
Ddx58-201ENSMUST00000037907 Baz1aO88379 1555 aa10.8□□□□□ -0.68
Ddx58-201ENSMUST00000037907 Esf1Q3V1V3 845 aaKnown RBP10.69□□□□□ -0.7
Ddx58-201ENSMUST00000037907 Pds5bQ4VA53 1446 aaKnown RBP10.63□□□□□ -0.71
Ddx58-201ENSMUST00000037907 BicraF8VPZ9 1578 aa10.63□□□□□ -0.71
Ddx58-201ENSMUST00000037907 Trim41Q5NCC3 630 aa10.62□□□□□ -0.71
Ddx58-201ENSMUST00000037907 Cngb1E1AZ71 1325 aa10.59□□□□□ -0.71
Ddx58-201ENSMUST00000037907 Crybg2B7ZCC2 1516 aa10.54□□□□□ -0.72
Ddx58-201ENSMUST00000037907 Cecr2E9Q2Z1 1453 aa10.51□□□□□ -0.73
Ddx58-201ENSMUST00000037907 Rtl1Q7M732 1744 aa10.48□□□□□ -0.73
Ddx58-201ENSMUST00000037907 Dnajc5bQ9CQ94 199 aa10.47□□□□□ -0.73
Ddx58-201ENSMUST00000037907 Ccdc180J3QNE4 1664 aa10.45□□□□□ -0.74
Ddx58-201ENSMUST00000037907 Smarca2Q6DIC0 1577 aa10.44□□□□□ -0.74
Ddx58-201ENSMUST00000037907 Atad2bE9Q166 1460 aaKnown RBP10.43□□□□□ -0.74
Ddx58-201ENSMUST00000037907 Ercc6F8VPZ5 1481 aa10.43□□□□□ -0.74
Ddx58-201ENSMUST00000037907 Brd4Q9ESU6 1400 aaKnown RBP10.41□□□□□ -0.74
Ddx58-201ENSMUST00000037907 Thoc2B1AZI6 1594 aaKnown RBP10.37□□□□□ -0.75
Ddx58-201ENSMUST00000037907 Il27Q8K3I6 234 aa10.35□□□□□ -0.75
Ddx58-201ENSMUST00000037907 Smarca4Q3TKT4 1613 aaKnown RBP10.33□□□□□ -0.76
Ddx58-201ENSMUST00000037907 Baz1bQ9Z277 1479 aa10.32□□□□□ -0.76
Ddx58-201ENSMUST00000037907 Ubl4bQ9CQ84 188 aa10.32□□□□□ -0.76
Ddx58-201ENSMUST00000037907 Gab3Q8BSM5 595 aa10.28□□□□□ -0.76
Ddx58-201ENSMUST00000037907 Iqgap2Q3UQ44 1575 aa10.27□□□□□ -0.77
Ddx58-201ENSMUST00000037907 CftrP26361 1476 aa10.27□□□□□ -0.77
Ddx58-201ENSMUST00000037907 Synj1Q8CHC4 1574 aa10.26□□□□□ -0.77
Ddx58-201ENSMUST00000037907 Cc2d2aQ8CFW7 1633 aa10.22□□□□□ -0.77
Ddx58-201ENSMUST00000037907 Phldb1Q6PDH0 1371 aaKnown RBP10.21□□□□□ -0.78
Ddx58-201ENSMUST00000037907 Fam135aQ6NS59 1506 aa10.18□□□□□ -0.78
Ddx58-201ENSMUST00000037907 Npm1Q61937 292 aaKnown RBP10.15□□□□□ -0.78
Ddx58-201ENSMUST00000037907 Chic1Q8CBW7 227 aa10.14□□□□□ -0.79
Ddx58-201ENSMUST00000037907 Frmpd1A2AKB4 1549 aa10.14□□□□□ -0.79
Ddx58-201ENSMUST00000037907 Kif15Q6P9L6 1387 aa10.14□□□□□ -0.79
Ddx58-201ENSMUST00000037907 Cttnbp2B9EJA2 1648 aa10.14□□□□□ -0.79
Ddx58-201ENSMUST00000037907 Zeb1Q64318 1117 aa10.12□□□□□ -0.79
Ddx58-201ENSMUST00000037907 Npm2Q80W85 207 aa10.12□□□□□ -0.79
Ddx58-201ENSMUST00000037907 Golga3P55937 1487 aa10.12□□□□□ -0.79
Ddx58-201ENSMUST00000037907 Rsf1E9PWW9 1441 aaKnown RBP10.1□□□□□ -0.79
Ddx58-201ENSMUST00000037907 Wdr62Q3U3T8 1523 aa10.08□□□□□ -0.8
Ddx58-201ENSMUST00000037907 Myt1lP97500 1187 aa10.06□□□□□ -0.8
Ddx58-201ENSMUST00000037907 HrcG5E8J6 738 aa10.06□□□□□ -0.8
Ddx58-201ENSMUST00000037907 Mrc2Q64449 1479 aa10.02□□□□□ -0.81
Ddx58-201ENSMUST00000037907 Cux2P70298 1426 aa10□□□□□ -0.81
Ddx58-201ENSMUST00000037907 Ccdc88bQ4QRL3 1481 aa9.99□□□□□ -0.81
Ddx58-201ENSMUST00000037907 Ehmt2Q9Z148 1263 aaKnown RBP9.95□□□□□ -0.82
Ddx58-201ENSMUST00000037907 Ccdc18Q640L5 1455 aa9.91□□□□□ -0.82
Ddx58-201ENSMUST00000037907 Dnajc5P60904 198 aa9.9□□□□□ -0.82
Ddx58-201ENSMUST00000037907 Fmn1Q05860 1466 aa9.9□□□□□ -0.82
Ddx58-201ENSMUST00000037907 Cep164Q5DU05 1446 aa9.89□□□□□ -0.83
Ddx58-201ENSMUST00000037907 Top2bQ64511 1612 aa9.82□□□□□ -0.84
Ddx58-201ENSMUST00000037907 Dhx29Q6PGC1 1365 aaKnown RBP9.81□□□□□ -0.84
Ddx58-201ENSMUST00000037907 LrpprcQ6PB66 1392 aaKnown RBP9.8□□□□□ -0.84
Ddx58-201ENSMUST00000037907 Ap3b1Q9Z1T1 1105 aa9.8□□□□□ -0.84
Ddx58-201ENSMUST00000037907 Unc13aQ4KUS2 1712 aa9.8□□□□□ -0.84
Ddx58-201ENSMUST00000037907 Lamc3Q9R0B6 1581 aa9.78□□□□□ -0.84
Ddx58-201ENSMUST00000037907 Pelp1Q9DBD5 1123 aaKnown RBP9.72□□□□□ -0.85
Ddx58-201ENSMUST00000037907 Camsap1A2AHC3 1581 aa9.71□□□□□ -0.85
Ddx58-201ENSMUST00000037907 Urb2E9Q7L1 1524 aaKnown RBP9.7□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Duox2A2AQ99 1517 aa9.68□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Plb1Q3TTY0 1478 aa9.68□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Top2aQ01320 1528 aaKnown RBP9.68□□□□□ -0.86
Ddx58-201ENSMUST00000037907 PogzQ8BZH4 1409 aaKnown RBP9.67□□□□□ -0.86
Ddx58-201ENSMUST00000037907 PtprkP35822 1457 aa9.67□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Fkbp15Q6P9Q6 1216 aaKnown RBP9.66□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Lrriq1Q0P5X1 1673 aa9.66□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Grin2bQ01097 1482 aa9.66□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Rapgef2Q8CHG7 1496 aa9.66□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Ifnlr1Q8CGK5 535 aa9.65□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Kif21aQ9QXL2 1672 aa9.65□□□□□ -0.86
Ddx58-201ENSMUST00000037907 Rad54l2Q99NG0 1466 aa9.65□□□□□ -0.87
Ddx58-201ENSMUST00000037907 TnnQ80Z71 1560 aa9.64□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Pabpn1Q8CCS6 302 aaKnown RBP9.64□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Shroom2A2ALU4 1481 aa9.64□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Lmod2Q3UHZ5 550 aa9.63□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Arhgap27A2AB59 869 aa9.62□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Plekhg3Q4VAC9 1341 aa9.61□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Cep162Q6ZQ06 1403 aa9.61□□□□□ -0.87
Ddx58-201ENSMUST00000037907 UbtfP25976 765 aaKnown RBP9.61□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Efcab5A0JP43 1406 aa9.61□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Eif4g3Q80XI3 1579 aaKnown RBP9.6□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Crocc2F6XLV1 1638 aa9.6□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Shroom4Q1W617 1475 aa9.59□□□□□ -0.87
Ddx58-201ENSMUST00000037907 Clip1Q922J3 1391 aa9.58□□□□□ -0.88
Ddx58-201ENSMUST00000037907 NrkQ9R0G8 1455 aa9.57□□□□□ -0.88
Ddx58-201ENSMUST00000037907 Setd5Q5XJV7 1441 aa9.55□□□□□ -0.88
Ddx58-201ENSMUST00000037907 AknaQ80VW7 1404 aa9.54□□□□□ -0.88
Ddx58-201ENSMUST00000037907 Ift140E9PY46 1464 aa9.54□□□□□ -0.88
Ddx58-201ENSMUST00000037907 Rpap1Q80TE0 1409 aa9.52□□□□□ -0.89
Ddx58-201ENSMUST00000037907 Samd9lQ69Z37 1561 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms