RNA–Protein interactions for RNA: ENSMUST00000014684.4

U2af1-201, Transcript of Splicing factor U2AF 35 kDa subunit, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene U2af1, Length 907 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1-201ENSMUST00000014684 Gm35339A0A140LHH9 1649 aa41.37■■■■■ 4.21
U2af1-201ENSMUST00000014684 NischQ80TM9 1593 aa40.41■■■■■ 4.06
U2af1-201ENSMUST00000014684 Abcc9P70170 1546 aa40.26■■■■■ 4.04
U2af1-201ENSMUST00000014684 Abcc8B2RUS7 1588 aa39.39■■■■□ 3.9
U2af1-201ENSMUST00000014684 ScribQ80U72 1612 aa38.81■■■■□ 3.8
U2af1-201ENSMUST00000014684 Dnajc5bQ9CQ94 199 aa37.64■■■■□ 3.62
U2af1-201ENSMUST00000014684 NacadQ5SWP3 1504 aa37.42■■■■□ 3.58
U2af1-201ENSMUST00000014684 Kdm5dQ62240 1548 aa37.24■■■■□ 3.55
U2af1-201ENSMUST00000014684 Sycp2Q9CUU3 1500 aa36.74■■■■□ 3.47
U2af1-201ENSMUST00000014684 BicraF8VPZ9 1578 aa36.46■■■■□ 3.43
U2af1-201ENSMUST00000014684 Thoc2B1AZI6 1594 aaKnown RBP35.93■■■■□ 3.34
U2af1-201ENSMUST00000014684 Dcaf1Q80TR8 1506 aa35.91■■■■□ 3.34
U2af1-201ENSMUST00000014684 Pds5bQ4VA53 1446 aaKnown RBP35.76■■■■□ 3.32
U2af1-201ENSMUST00000014684 Dnajc5P60904 198 aa35.41■■■■□ 3.26
U2af1-201ENSMUST00000014684 Cc2d2aQ8CFW7 1633 aa35.39■■■■□ 3.26
U2af1-201ENSMUST00000014684 Rb1cc1Q9ESK9 1588 aa35.13■■■■□ 3.21
U2af1-201ENSMUST00000014684 Atad2bE9Q166 1460 aaKnown RBP35.12■■■■□ 3.21
U2af1-201ENSMUST00000014684 Ercc6F8VPZ5 1481 aa35.03■■■■□ 3.2
U2af1-201ENSMUST00000014684 Fam135aQ6NS59 1506 aa34.82■■■■□ 3.16
U2af1-201ENSMUST00000014684 Trim41Q5NCC3 630 aa34.8■■■■□ 3.16
U2af1-201ENSMUST00000014684 Smarca2Q6DIC0 1577 aa34.58■■■■□ 3.13
U2af1-201ENSMUST00000014684 Baz1aO88379 1555 aa34.47■■■■□ 3.11
U2af1-201ENSMUST00000014684 Crybg2B7ZCC2 1516 aa34.45■■■■□ 3.1
U2af1-201ENSMUST00000014684 Zcchc6Q5BLK4 1491 aaKnown RBP34.38■■■■□ 3.09
U2af1-201ENSMUST00000014684 Phldb1Q6PDH0 1371 aaKnown RBP34.36■■■■□ 3.09
U2af1-201ENSMUST00000014684 Iqgap2Q3UQ44 1575 aa34.35■■■■□ 3.09
U2af1-201ENSMUST00000014684 Smarca4Q3TKT4 1613 aaKnown RBP34.31■■■■□ 3.08
U2af1-201ENSMUST00000014684 Baz1bQ9Z277 1479 aa34.28■■■■□ 3.08
U2af1-201ENSMUST00000014684 Ubl4bQ9CQ84 188 aa34.26■■■■□ 3.08
U2af1-201ENSMUST00000014684 Wdr62Q3U3T8 1523 aa34.23■■■■□ 3.07
U2af1-201ENSMUST00000014684 Frmpd1A2AKB4 1549 aa34.21■■■■□ 3.07
U2af1-201ENSMUST00000014684 Ccdc180J3QNE4 1664 aa34.13■■■■□ 3.05
U2af1-201ENSMUST00000014684 Mrc2Q64449 1479 aa34.1■■■■□ 3.05
U2af1-201ENSMUST00000014684 Rhox8Q6VSS7 320 aa33.88■■■■□ 3.01
U2af1-201ENSMUST00000014684 Cecr2E9Q2Z1 1453 aa33.86■■■■□ 3.01
U2af1-201ENSMUST00000014684 Unc13aQ4KUS2 1712 aa33.67■■■□□ 2.98
U2af1-201ENSMUST00000014684 Lrriq1Q0P5X1 1673 aa33.47■■■□□ 2.95
U2af1-201ENSMUST00000014684 Rsf1E9PWW9 1441 aaKnown RBP33.35■■■□□ 2.93
U2af1-201ENSMUST00000014684 Shroom2A2ALU4 1481 aa33.28■■■□□ 2.92
U2af1-201ENSMUST00000014684 Col17a1Q07563 1470 aa33.15■■■□□ 2.9
U2af1-201ENSMUST00000014684 Kif21aQ9QXL2 1672 aa32.94■■■□□ 2.86
U2af1-201ENSMUST00000014684 Eif4g3Q80XI3 1579 aaKnown RBP32.93■■■□□ 2.86
U2af1-201ENSMUST00000014684 Cux2P70298 1426 aa32.91■■■□□ 2.86
U2af1-201ENSMUST00000014684 Pabpn1Q8CCS6 302 aaKnown RBP32.87■■■□□ 2.85
U2af1-201ENSMUST00000014684 CftrP26361 1476 aa32.79■■■□□ 2.84
U2af1-201ENSMUST00000014684 Cttnbp2B9EJA2 1648 aa32.78■■■□□ 2.84
U2af1-201ENSMUST00000014684 Top2bQ64511 1612 aa32.77■■■□□ 2.84
U2af1-201ENSMUST00000014684 Pelp1Q9DBD5 1123 aaKnown RBP32.66■■■□□ 2.82
U2af1-201ENSMUST00000014684 Kif15Q6P9L6 1387 aa32.65■■■□□ 2.82
U2af1-201ENSMUST00000014684 Synj1Q8CHC4 1574 aa32.62■■■□□ 2.81
U2af1-201ENSMUST00000014684 Npm1Q61937 292 aaKnown RBP32.58■■■□□ 2.81
U2af1-201ENSMUST00000014684 Pcdh10E9PXQ7 1057 aa32.49■■■□□ 2.79
U2af1-201ENSMUST00000014684 Esf1Q3V1V3 845 aaKnown RBP32.42■■■□□ 2.78
U2af1-201ENSMUST00000014684 Urb2E9Q7L1 1524 aaKnown RBP32.41■■■□□ 2.78
U2af1-201ENSMUST00000014684 Zcchc11B2RX14 1644 aaKnown RBP32.4■■■□□ 2.78
U2af1-201ENSMUST00000014684 Brd4Q9ESU6 1400 aaKnown RBP32.35■■■□□ 2.77
U2af1-201ENSMUST00000014684 Plb1Q3TTY0 1478 aa32.33■■■□□ 2.77
U2af1-201ENSMUST00000014684 Cep164Q5DU05 1446 aa32.26■■■□□ 2.76
U2af1-201ENSMUST00000014684 Arhgef5E9Q7D5 1581 aa32.17■■■□□ 2.74
U2af1-201ENSMUST00000014684 Ttbk1Q6PCN3 1308 aa32.16■■■□□ 2.74
U2af1-201ENSMUST00000014684 Lamc3Q9R0B6 1581 aa32.11■■■□□ 2.73
U2af1-201ENSMUST00000014684 Dhx29Q6PGC1 1365 aaKnown RBP32.09■■■□□ 2.73
U2af1-201ENSMUST00000014684 Rusc2Q80U22 1514 aa32.02■■■□□ 2.72
U2af1-201ENSMUST00000014684 Il27Q8K3I6 234 aa31.99■■■□□ 2.71
U2af1-201ENSMUST00000014684 Ccdc136Q3TVA9 1136 aa31.94■■■□□ 2.7
U2af1-201ENSMUST00000014684 Adgrl3Q80TS3 1537 aa31.91■■■□□ 2.7
U2af1-201ENSMUST00000014684 Crocc2F6XLV1 1638 aa31.91■■■□□ 2.7
U2af1-201ENSMUST00000014684 Ift140E9PY46 1464 aa31.84■■■□□ 2.69
U2af1-201ENSMUST00000014684 LrpprcQ6PB66 1392 aaKnown RBP31.79■■■□□ 2.68
U2af1-201ENSMUST00000014684 Ccdc18Q640L5 1455 aa31.78■■■□□ 2.68
U2af1-201ENSMUST00000014684 PtprkP35822 1457 aa31.7■■■□□ 2.66
U2af1-201ENSMUST00000014684 Rtl1Q7M732 1744 aa31.66■■■□□ 2.66
U2af1-201ENSMUST00000014684 Gm156Q58A37 223 aa31.66■■■□□ 2.66
U2af1-201ENSMUST00000014684 PtprtQ99M80 1454 aa31.65■■■□□ 2.66
U2af1-201ENSMUST00000014684 Cep170Q6A065 1588 aa31.6■■■□□ 2.65
U2af1-201ENSMUST00000014684 Gapvd1Q6PAR5 1458 aa31.52■■■□□ 2.64
U2af1-201ENSMUST00000014684 Plekhg3Q4VAC9 1341 aa31.48■■■□□ 2.63
U2af1-201ENSMUST00000014684 PogzQ8BZH4 1409 aaKnown RBP31.46■■■□□ 2.63
U2af1-201ENSMUST00000014684 Camsap1A2AHC3 1581 aa31.43■■■□□ 2.62
U2af1-201ENSMUST00000014684 Disp1Q3TDN0 1521 aa31.4■■■□□ 2.62
U2af1-201ENSMUST00000014684 Cc2d2bA0A286YDU8 1405 aa31.34■■■□□ 2.61
U2af1-201ENSMUST00000014684 TnnQ80Z71 1560 aa31.31■■■□□ 2.6
U2af1-201ENSMUST00000014684 Golga3P55937 1487 aa31.31■■■□□ 2.6
U2af1-201ENSMUST00000014684 Duox2A2AQ99 1517 aa31.3■■■□□ 2.6
U2af1-201ENSMUST00000014684 Fgd6Q69ZL1 1399 aa31.28■■■□□ 2.6
U2af1-201ENSMUST00000014684 Nup160Q9Z0W3 1402 aaKnown RBP31.26■■■□□ 2.6
U2af1-201ENSMUST00000014684 Pprc1Q6NZN1 1644 aa31.25■■■□□ 2.59
U2af1-201ENSMUST00000014684 Setd1bQ8CFT2 1985 aa31.25■■■□□ 2.59
U2af1-201ENSMUST00000014684 Pbrm1Q8BSQ9 1634 aaKnown RBP31.2■■■□□ 2.58
U2af1-201ENSMUST00000014684 AknaQ80VW7 1404 aa31.15■■■□□ 2.58
U2af1-201ENSMUST00000014684 Ppp1r18Q8BQ30 594 aa31.14■■■□□ 2.58
U2af1-201ENSMUST00000014684 Ythdc2B2RR83 1445 aaKnown RBP31.1■■■□□ 2.57
U2af1-201ENSMUST00000014684 Rapgef2Q8CHG7 1496 aa31.08■■■□□ 2.57
U2af1-201ENSMUST00000014684 Abcc1O35379 1528 aa31.06■■■□□ 2.56
U2af1-201ENSMUST00000014684 AqrQ8CFQ3 1481 aaKnown RBP31.05■■■□□ 2.56
U2af1-201ENSMUST00000014684 Samd9lQ69Z37 1561 aa31.03■■■□□ 2.56
U2af1-201ENSMUST00000014684 Rad54l2Q99NG0 1466 aa30.92■■■□□ 2.54
U2af1-201ENSMUST00000014684 Grin2aP35436 1464 aa30.89■■■□□ 2.54
U2af1-201ENSMUST00000014684 Setbp1Q9Z180 1582 aa30.88■■■□□ 2.53
U2af1-201ENSMUST00000014684 Cngb1E1AZ71 1325 aa30.88■■■□□ 2.53
Retrieved 100 of 22,080 RNA–protein pairs in 114.8 ms