RNA–Protein interactions for RNA: YOL054W

PSH1, Transcript of E3 ubiquitin ligase targeting centromere-binding protein Cse4p, yeastyeast

Gene PSH1, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSH1YOL054W HXK1P04806 485 aaKnown RBP6.84□□□□□ -1.31
PSH1YOL054W PDC6P26263 563 aaKnown RBP6.84□□□□□ -1.31
PSH1YOL054W DAL1P32375 460 aa6.84□□□□□ -1.31
PSH1YOL054W FAA3P39002 694 aa6.84□□□□□ -1.31
PSH1YOL054W VTC4P47075 721 aa6.84□□□□□ -1.31
PSH1YOL054W LSC2P53312 427 aa6.84□□□□□ -1.31
PSH1YOL054W MCD1Q12158 566 aa6.84□□□□□ -1.31
PSH1YOL054W SIR4P11978 1358 aa6.83□□□□□ -1.32
PSH1YOL054W PRD1P25375 712 aa6.83□□□□□ -1.32
PSH1YOL054W PRP40P33203 583 aaKnown RBP6.83□□□□□ -1.32
PSH1YOL054W SNF7P39929 240 aaKnown RBP6.83□□□□□ -1.32
PSH1YOL054W PSH1Q12161 406 aa6.83□□□□□ -1.32
PSH1YOL054W FLP1P03870 423 aa6.82□□□□□ -1.32
PSH1YOL054W YIL092WP40497 633 aa6.82□□□□□ -1.32
PSH1YOL054W CUS1Q02554 436 aaPredicted RBP6.82□□□□□ -1.32
PSH1YOL054W THI22Q06490 572 aa6.82□□□□□ -1.32
PSH1YOL054W LEU1P07264 779 aaKnown RBP6.81□□□□□ -1.32
PSH1YOL054W PRE9P23638 258 aaKnown RBP6.81□□□□□ -1.32
PSH1YOL054W SLA1P32790 1244 aa6.81□□□□□ -1.32
PSH1YOL054W CAB3P36076 571 aa6.81□□□□□ -1.32
PSH1YOL054W YJR098CP47139 656 aa6.81□□□□□ -1.32
PSH1YOL054W HEF3P53978 1044 aaKnown RBP6.81□□□□□ -1.32
PSH1YOL054W TOS4Q06266 489 aa6.81□□□□□ -1.32
PSH1YOL054W TY1A-DR3Q12441 440 aa6.81□□□□□ -1.32
PSH1YOL054W USO1P25386 1790 aa6.8□□□□□ -1.32
PSH1YOL054W SRP40P32583 406 aaPredicted RBP6.8□□□□□ -1.32
PSH1YOL054W GRX4P32642 244 aa6.8□□□□□ -1.32
PSH1YOL054W BRN1P38170 754 aa6.8□□□□□ -1.32
PSH1YOL054W YJL049WP47048 450 aa6.8□□□□□ -1.32
PSH1YOL054W SSF2Q12153 453 aaPredicted RBP6.79□□□□□ -1.32
PSH1YOL054W LEU2P04173 364 aaPredicted RBP6.78□□□□□ -1.32
PSH1YOL054W RPP1AP05318 106 aaPredicted RBP6.78□□□□□ -1.32
PSH1YOL054W DAL5P15365 543 aa6.78□□□□□ -1.32
PSH1YOL054W RGP1P16664 663 aa6.78□□□□□ -1.32
PSH1YOL054W ROX1P25042 368 aa6.78□□□□□ -1.32
PSH1YOL054W UBP15P50101 1230 aa6.78□□□□□ -1.32
PSH1YOL054W MON1P53129 644 aa6.78□□□□□ -1.32
PSH1YOL054W UBP2Q01476 1272 aa6.78□□□□□ -1.32
PSH1YOL054W EMG1Q06287 252 aaKnown RBP6.78□□□□□ -1.32
PSH1YOL054W AUS1Q08409 1394 aa6.78□□□□□ -1.32
PSH1YOL054W APC1P53886 1748 aa6.77□□□□□ -1.33
PSH1YOL054W PCT1P13259 424 aa6.77□□□□□ -1.33
PSH1YOL054W PPH3P32345 308 aa6.77□□□□□ -1.33
PSH1YOL054W YIL165CP40446 119 aa6.77□□□□□ -1.33
PSH1YOL054W OSW7P43611 510 aa6.77□□□□□ -1.33
PSH1YOL054W MTR4P47047 1073 aaKnown RBP6.77□□□□□ -1.33
PSH1YOL054W SKP1P52286 194 aa6.77□□□□□ -1.33
PSH1YOL054W PAP2P53632 584 aaKnown RBP6.77□□□□□ -1.33
PSH1YOL054W RCM1P53972 490 aa6.77□□□□□ -1.33
PSH1YOL054W YPL109CQ02981 657 aa6.77□□□□□ -1.33
PSH1YOL054W MCM5P29496 775 aaKnown RBP6.76□□□□□ -1.33
PSH1YOL054W NAB2P32505 525 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
PSH1YOL054W YKL091CP33324 310 aaKnown RBP6.76□□□□□ -1.33
PSH1YOL054W NCL1P38205 684 aaKnown RBP6.76□□□□□ -1.33
PSH1YOL054W APM2P38700 605 aa6.76□□□□□ -1.33
PSH1YOL054W NMD2P38798 1089 aaKnown RBP6.76□□□□□ -1.33
PSH1YOL054W NUT1P53114 1132 aa6.76□□□□□ -1.33
PSH1YOL054W ULP1Q02724 621 aa6.76□□□□□ -1.33
PSH1YOL054W GDE1Q02979 1223 aa6.76□□□□□ -1.33
PSH1YOL054W ADI1Q03677 179 aa6.76□□□□□ -1.33
PSH1YOL054W HIM1Q06674 414 aa6.76□□□□□ -1.33
PSH1YOL054W RTT109Q07794 436 aa6.76□□□□□ -1.33
PSH1YOL054W TCB1Q12466 1186 aa6.76□□□□□ -1.33
PSH1YOL054W PYC2P32327 1180 aaKnown RBP6.75□□□□□ -1.33
PSH1YOL054W SQT1P35184 431 aa6.75□□□□□ -1.33
PSH1YOL054W EBP2P36049 427 aaKnown RBP6.75□□□□□ -1.33
PSH1YOL054W RVS167P39743 482 aaKnown RBP6.75□□□□□ -1.33
PSH1YOL054W ITC1P53125 1264 aa6.75□□□□□ -1.33
PSH1YOL054W MSH6Q03834 1242 aa6.75□□□□□ -1.33
PSH1YOL054W PMT7Q06644 662 aa6.75□□□□□ -1.33
PSH1YOL054W TY1B-NL2Q99337 1749 aaKnown RBP6.75□□□□□ -1.33
PSH1YOL054W RPO41P13433 1351 aaKnown RBP6.74□□□□□ -1.33
PSH1YOL054W CDC34P14682 295 aa6.74□□□□□ -1.33
PSH1YOL054W VPS24P36095 224 aaKnown RBP6.74□□□□□ -1.33
PSH1YOL054W ICP55P40051 511 aa6.74□□□□□ -1.33
PSH1YOL054W RSM26P47141 266 aa6.74□□□□□ -1.33
PSH1YOL054W CTR9P89105 1077 aa6.74□□□□□ -1.33
PSH1YOL054W LSP1Q12230 341 aaKnown RBP6.74□□□□□ -1.33
PSH1YOL054W UGA4P32837 571 aa6.73□□□□□ -1.33
PSH1YOL054W YAF9P53930 226 aa6.73□□□□□ -1.33
PSH1YOL054W DOS2P54858 310 aa6.73□□□□□ -1.33
PSH1YOL054W ECM16Q04217 1267 aaKnown RBP6.73□□□□□ -1.33
PSH1YOL054W RSC2Q06488 889 aa6.73□□□□□ -1.33
PSH1YOL054W CDC53Q12018 815 aaKnown RBP6.73□□□□□ -1.33
PSH1YOL054W YOR131CQ12486 218 aa6.73□□□□□ -1.33
PSH1YOL054W COBP00163 385 aa6.72□□□□□ -1.33
PSH1YOL054W STI1P15705 589 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
PSH1YOL054W PPG1P32838 368 aa6.72□□□□□ -1.33
PSH1YOL054W PRP43P53131 767 aaKnown RBP6.72□□□□□ -1.33
PSH1YOL054W RIA1P53893 1110 aa6.72□□□□□ -1.33
PSH1YOL054W NSE3Q05541 303 aa6.72□□□□□ -1.33
PSH1YOL054W MRPL16P38064 232 aa6.71□□□□□ -1.34
PSH1YOL054W IOC3P43596 787 aa6.71□□□□□ -1.34
PSH1YOL054W ROG3P43602 733 aa6.71□□□□□ -1.34
PSH1YOL054W FAA4P47912 694 aaKnown RBP6.71□□□□□ -1.34
PSH1YOL054W PPT1P53043 513 aa6.71□□□□□ -1.34
PSH1YOL054W RNH70P53331 553 aa6.71□□□□□ -1.34
PSH1YOL054W RTT10Q08924 1013 aa6.71□□□□□ -1.34
PSH1YOL054W RAD27P26793 382 aa6.7□□□□□ -1.34
PSH1YOL054W MSP1P28737 362 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms