RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W PEX13P80667 386 aa5.63□□□□□ -1.51
PTI1YGR156W YDL177CQ12257 170 aa5.63□□□□□ -1.51
PTI1YGR156W FRT1Q99332 602 aa5.63□□□□□ -1.51
PTI1YGR156W KAR2P16474 682 aaKnown RBP5.62□□□□□ -1.51
PTI1YGR156W VMA4P22203 233 aaKnown RBP5.62□□□□□ -1.51
PTI1YGR156W MSH3P25336 1018 aa5.62□□□□□ -1.51
PTI1YGR156W RIM8P53179 542 aa5.62□□□□□ -1.51
PTI1YGR156W UTP5Q04177 643 aaKnown RBP5.62□□□□□ -1.51
PTI1YGR156W NOP8Q08287 484 aaPredicted RBP5.62□□□□□ -1.51
PTI1YGR156W NMD3P38861 518 aaKnown RBP5.61□□□□□ -1.51
PTI1YGR156W RSM26P47141 266 aa5.61□□□□□ -1.51
PTI1YGR156W YNR063WP53749 607 aa5.61□□□□□ -1.51
PTI1YGR156W GCD6P32501 712 aaKnown RBP5.6□□□□□ -1.51
PTI1YGR156W SQT1P35184 431 aa5.6□□□□□ -1.51
PTI1YGR156W GEF1P37020 779 aa5.6□□□□□ -1.51
PTI1YGR156W XKS1P42826 600 aa5.6□□□□□ -1.51
PTI1YGR156W SNO2P53823 222 aa5.6□□□□□ -1.51
PTI1YGR156W RSA3Q05942 220 aaKnown RBP5.6□□□□□ -1.51
PTI1YGR156W HDA2Q06629 674 aa5.6□□□□□ -1.51
PTI1YGR156W SAM35P14693 329 aa5.59□□□□□ -1.51
PTI1YGR156W AIM26P32858 118 aa5.59□□□□□ -1.51
PTI1YGR156W TOD6P34219 525 aa5.59□□□□□ -1.51
PTI1YGR156W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51 RIP-Chip
PTI1YGR156W SOD2P00447 233 aa5.58□□□□□ -1.52
PTI1YGR156W SRO9P25567 434 aaKnown RBP5.58□□□□□ -1.52
PTI1YGR156W VPS35P34110 944 aa5.58□□□□□ -1.52
PTI1YGR156W NBA1Q08229 501 aaKnown RBP5.58□□□□□ -1.52
PTI1YGR156W YOR352WQ08816 343 aa5.58□□□□□ -1.52
PTI1YGR156W PRP40P33203 583 aaKnown RBP5.57□□□□□ -1.52
PTI1YGR156W YML020WQ03722 664 aa5.57□□□□□ -1.52
PTI1YGR156W OXR1Q08952 273 aa5.57□□□□□ -1.52
PTI1YGR156W RPS13P05756 151 aaKnown RBP5.56□□□□□ -1.52
PTI1YGR156W QNS1P38795 714 aaKnown RBP5.56□□□□□ -1.52
PTI1YGR156W VPS53P47061 822 aa5.56□□□□□ -1.52
PTI1YGR156W ENV11P53246 860 aa5.56□□□□□ -1.52
PTI1YGR156W DAL4Q04895 635 aa5.56□□□□□ -1.52
PTI1YGR156W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52 RIP-Chip
PTI1YGR156W ULP1Q02724 621 aa5.55□□□□□ -1.52
PTI1YGR156W RKM2Q03942 479 aa5.55□□□□□ -1.52
PTI1YGR156W YPL277CQ08989 487 aa5.55□□□□□ -1.52
PTI1YGR156W ADD66P36040 267 aa5.54□□□□□ -1.52
PTI1YGR156W YHL050CP38721 697 aa5.54□□□□□ -1.52
PTI1YGR156W PEX28P38848 579 aa5.54□□□□□ -1.52
PTI1YGR156W YHR219WP38900 624 aa5.54□□□□□ -1.52
PTI1YGR156W YJL045WP47052 634 aa5.54□□□□□ -1.52
PTI1YGR156W YLR358CO13565 187 aa5.53□□□□□ -1.52
PTI1YGR156W SPS1P08458 490 aa5.53□□□□□ -1.52
PTI1YGR156W YSC84P32793 468 aa5.53□□□□□ -1.52
PTI1YGR156W RSC58Q07979 502 aa5.52□□□□□ -1.53
PTI1YGR156W COQ4O13525 335 aa5.51□□□□□ -1.53
PTI1YGR156W PHO4P07270 312 aaKnown RBP5.51□□□□□ -1.53
PTI1YGR156W UGA4P32837 571 aa5.51□□□□□ -1.53
PTI1YGR156W CCZ1P38273 704 aa5.51□□□□□ -1.53
PTI1YGR156W GSF2Q04697 403 aaKnown RBP5.51□□□□□ -1.53
PTI1YGR156W ADI1Q03677 179 aa5.5□□□□□ -1.53
PTI1YGR156W RSB1Q08417 382 aa5.5□□□□□ -1.53
PTI1YGR156W RDH54P38086 958 aa5.49□□□□□ -1.53
PTI1YGR156W HNT2P49775 206 aa5.49□□□□□ -1.53
PTI1YGR156W YGL140CP53120 1219 aa5.49□□□□□ -1.53
PTI1YGR156W EST2Q06163 884 aa5.49□□□□□ -1.53
PTI1YGR156W DAK2P43550 591 aa5.48□□□□□ -1.53
PTI1YGR156W KIP1P28742 1111 aa5.47□□□□□ -1.53
PTI1YGR156W ABZ1P37254 787 aaPredicted RBP5.47□□□□□ -1.53
PTI1YGR156W STM1P39015 273 aaKnown RBP5.47□□□□□ -1.53
PTI1YGR156W THI12P42883 340 aa5.47□□□□□ -1.53
PTI1YGR156W THI5P43534 340 aa5.47□□□□□ -1.53
PTI1YGR156W THI11P47183 340 aa5.47□□□□□ -1.53
PTI1YGR156W HOS3Q02959 697 aaKnown RBP5.47□□□□□ -1.53
PTI1YGR156W CLU1Q03690 1277 aaKnown RBP5.47□□□□□ -1.53
PTI1YGR156W SGD1Q06132 899 aa5.47□□□□□ -1.53
PTI1YGR156W THI13Q07748 340 aa5.47□□□□□ -1.53
PTI1YGR156W PTC5Q12511 572 aa5.47□□□□□ -1.53
PTI1YGR156W PRE10P21242 288 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
PTI1YGR156W SHM2P37291 469 aaKnown RBP5.46□□□□□ -1.54
PTI1YGR156W PPX1P38698 397 aa5.46□□□□□ -1.54
PTI1YGR156W SEC26P41810 973 aaKnown RBP5.46□□□□□ -1.54
PTI1YGR156W TNA1P53322 534 aa5.46□□□□□ -1.54
PTI1YGR156W TUB2P02557 457 aaKnown RBP5.45□□□□□ -1.54
PTI1YGR156W LAM1P38851 1228 aa5.45□□□□□ -1.54
PTI1YGR156W SPT20P50875 604 aa5.45□□□□□ -1.54
PTI1YGR156W YPL109CQ02981 657 aa5.45□□□□□ -1.54
PTI1YGR156W TAD3Q9URQ3 322 aa5.45□□□□□ -1.54
PTI1YGR156W PUF4P25339 888 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
PTI1YGR156W CTS1P29029 562 aa5.44□□□□□ -1.54
PTI1YGR156W MET4P32389 672 aa5.44□□□□□ -1.54
PTI1YGR156W MPT5P39016 859 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
PTI1YGR156W MEF2P39677 819 aa5.44□□□□□ -1.54
PTI1YGR156W MSC6Q08818 692 aaKnown RBP5.44□□□□□ -1.54
PTI1YGR156W SEC23P15303 768 aaKnown RBP5.43□□□□□ -1.54
PTI1YGR156W TAT2P38967 592 aa5.43□□□□□ -1.54
PTI1YGR156W RCL1Q08096 367 aaPredicted RBP5.43□□□□□ -1.54
PTI1YGR156W CYC1P00044 109 aaPredicted RBP5.42□□□□□ -1.54
PTI1YGR156W DED1P06634 604 aaKnown RBP5.42□□□□□ -1.54
PTI1YGR156W TAF13P11747 167 aa5.42□□□□□ -1.54
PTI1YGR156W BAP2P38084 609 aa5.42□□□□□ -1.54
PTI1YGR156W ALG3P38179 458 aa5.42□□□□□ -1.54
PTI1YGR156W PIK1P39104 1066 aa5.42□□□□□ -1.54
PTI1YGR156W GPB2P39717 880 aa5.42□□□□□ -1.54
PTI1YGR156W GCN5Q03330 439 aa5.42□□□□□ -1.54
PTI1YGR156W YPL260WQ08977 551 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms