RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W RSA3Q05942 220 aaKnown RBP3.08□□□□□ -1.92
LCD1YDR499W TOS4Q06266 489 aa3.08□□□□□ -1.92
LCD1YDR499W ESC8Q08119 714 aa3.08□□□□□ -1.92
LCD1YDR499W YDL177CQ12257 170 aa3.08□□□□□ -1.92
LCD1YDR499W PHO4P07270 312 aaKnown RBP3.08□□□□□ -1.92
LCD1YDR499W AIM3P38266 947 aaKnown RBP3.08□□□□□ -1.92
LCD1YDR499W HSE1P38753 452 aa3.08□□□□□ -1.92
LCD1YDR499W THI12P42883 340 aa3.08□□□□□ -1.92
LCD1YDR499W THI5P43534 340 aa3.08□□□□□ -1.92
LCD1YDR499W THI11P47183 340 aa3.08□□□□□ -1.92
LCD1YDR499W THI13Q07748 340 aa3.08□□□□□ -1.92
LCD1YDR499W LAP2Q10740 671 aa3.08□□□□□ -1.92
LCD1YDR499W YCR015CP25616 317 aa3.07□□□□□ -1.92
LCD1YDR499W GCD6P32501 712 aaKnown RBP3.07□□□□□ -1.92
LCD1YDR499W PEX28P38848 579 aa3.07□□□□□ -1.92
LCD1YDR499W DAK2P43550 591 aa3.07□□□□□ -1.92
LCD1YDR499W TAF1P46677 1066 aa3.07□□□□□ -1.92
LCD1YDR499W MRPL22P53881 309 aa3.07□□□□□ -1.92
LCD1YDR499W SAM35P14693 329 aa3.07□□□□□ -1.92
LCD1YDR499W KAR2P16474 682 aaKnown RBP3.07□□□□□ -1.92
LCD1YDR499W MET4P32389 672 aa3.07□□□□□ -1.92
LCD1YDR499W AIM26P32858 118 aa3.07□□□□□ -1.92
LCD1YDR499W VPS35P34110 944 aa3.07□□□□□ -1.92
LCD1YDR499W THI80P35202 319 aa3.07□□□□□ -1.92
LCD1YDR499W SSF1P38789 453 aaPredicted RBP3.07□□□□□ -1.92
LCD1YDR499W YJL045WP47052 634 aa3.07□□□□□ -1.92
LCD1YDR499W HRK1Q08732 759 aaKnown RBP3.07□□□□□ -1.92
LCD1YDR499W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
LCD1YDR499W VMA4P22203 233 aaKnown RBP3.05□□□□□ -1.92
LCD1YDR499W FOL2P51601 243 aaKnown RBP3.05□□□□□ -1.92
LCD1YDR499W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
LCD1YDR499W OXR1Q08952 273 aa3.05□□□□□ -1.92
LCD1YDR499W WHI5Q12416 295 aa3.05□□□□□ -1.92
LCD1YDR499W PRP6P19735 899 aaPredicted RBP3.05□□□□□ -1.92
LCD1YDR499W MDL2P33311 773 aa3.05□□□□□ -1.92
LCD1YDR499W QNS1P38795 714 aaKnown RBP3.05□□□□□ -1.92
LCD1YDR499W GIP4P39732 760 aa3.05□□□□□ -1.92
LCD1YDR499W DED1P06634 604 aaKnown RBP3.04□□□□□ -1.92
LCD1YDR499W FAA3P39002 694 aa3.04□□□□□ -1.92
LCD1YDR499W YGL140CP53120 1219 aa3.04□□□□□ -1.92
LCD1YDR499W HEM13P11353 328 aaKnown RBP3.04□□□□□ -1.92
LCD1YDR499W ADD66P36040 267 aa3.04□□□□□ -1.92
LCD1YDR499W FLR1P38124 548 aa3.04□□□□□ -1.92
LCD1YDR499W PPX1P38698 397 aa3.04□□□□□ -1.92
LCD1YDR499W ADI1Q03677 179 aa3.04□□□□□ -1.92
LCD1YDR499W MSC6Q08818 692 aaKnown RBP3.04□□□□□ -1.92
LCD1YDR499W RPT1P33299 467 aaKnown RBP3.03□□□□□ -1.92
LCD1YDR499W TOD6P34219 525 aa3.03□□□□□ -1.92
LCD1YDR499W RDH54P38086 958 aa3.03□□□□□ -1.92
LCD1YDR499W STM1P39015 273 aaKnown RBP3.03□□□□□ -1.92
LCD1YDR499W GPB2P39717 880 aa3.03□□□□□ -1.92
LCD1YDR499W YPL109CQ02981 657 aa3.03□□□□□ -1.92
LCD1YDR499W RIM8P53179 542 aa3.03□□□□□ -1.93
LCD1YDR499W EST2Q06163 884 aa3.03□□□□□ -1.93
LCD1YDR499W YPL277CQ08989 487 aa3.03□□□□□ -1.93
LCD1YDR499W YSC84P32793 468 aa3.02□□□□□ -1.93
LCD1YDR499W VPS53P47061 822 aa3.02□□□□□ -1.93
LCD1YDR499W SNO2P53823 222 aa3.02□□□□□ -1.93
LCD1YDR499W RCL1Q08096 367 aaPredicted RBP3.02□□□□□ -1.93
LCD1YDR499W RPS13P05756 151 aaKnown RBP3.01□□□□□ -1.93
LCD1YDR499W SPS1P08458 490 aa3.01□□□□□ -1.93
LCD1YDR499W SRO9P25567 434 aaKnown RBP3.01□□□□□ -1.93
LCD1YDR499W KIP1P28742 1111 aa3.01□□□□□ -1.93
LCD1YDR499W AFG2P32794 780 aa3.01□□□□□ -1.93
LCD1YDR499W PIC2P40035 300 aa3.01□□□□□ -1.93
LCD1YDR499W RKM2Q03942 479 aa3.01□□□□□ -1.93
LCD1YDR499W RSC58Q07979 502 aa3.01□□□□□ -1.93
LCD1YDR499W PTC5Q12511 572 aa3.01□□□□□ -1.93
LCD1YDR499W IPL1P38991 367 aa3.01□□□□□ -1.93
LCD1YDR499W NBA1Q08229 501 aaKnown RBP3.01□□□□□ -1.93
LCD1YDR499W COQ4O13525 335 aa3□□□□□ -1.93
LCD1YDR499W HXK1P04806 485 aaKnown RBP3□□□□□ -1.93
LCD1YDR499W SEC23P15303 768 aaKnown RBP3□□□□□ -1.93
LCD1YDR499W SOD2P00447 233 aa3□□□□□ -1.93
LCD1YDR499W ALG3P38179 458 aa3□□□□□ -1.93
LCD1YDR499W YOR352WQ08816 343 aa3□□□□□ -1.93
LCD1YDR499W RSB1Q08417 382 aa2.99□□□□□ -1.93
LCD1YDR499W CCZ1P38273 704 aa2.99□□□□□ -1.93
LCD1YDR499W RAT1Q02792 1006 aaKnown RBP2.99□□□□□ -1.93
LCD1YDR499W ROD1Q02805 837 aa2.99□□□□□ -1.93
LCD1YDR499W HDA2Q06629 674 aa2.99□□□□□ -1.93
LCD1YDR499W SPO21Q12411 609 aa2.99□□□□□ -1.93
LCD1YDR499W SEC20P28791 383 aa2.98□□□□□ -1.93
LCD1YDR499W SPT20P50875 604 aa2.98□□□□□ -1.93
LCD1YDR499W TNA1P53322 534 aa2.98□□□□□ -1.93
LCD1YDR499W HOS3Q02959 697 aaKnown RBP2.98□□□□□ -1.93
LCD1YDR499W CYC1P00044 109 aaPredicted RBP2.97□□□□□ -1.93
LCD1YDR499W ROT1Q03691 256 aa2.97□□□□□ -1.93
LCD1YDR499W MRPS18P42847 217 aa2.97□□□□□ -1.93
LCD1YDR499W YFL054CP43549 646 aa2.97□□□□□ -1.93
LCD1YDR499W SGD1Q06132 899 aa2.97□□□□□ -1.93
LCD1YDR499W PRE9P23638 258 aaKnown RBP2.96□□□□□ -1.94
LCD1YDR499W RPS26AP39938 119 aaKnown RBP2.96□□□□□ -1.94
LCD1YDR499W RPS26BP39939 119 aaKnown RBP2.96□□□□□ -1.94
LCD1YDR499W SEC26P41810 973 aaKnown RBP2.96□□□□□ -1.94
LCD1YDR499W YGR122WP53272 402 aa2.96□□□□□ -1.94
LCD1YDR499W SNF5P18480 905 aa2.96□□□□□ -1.94
LCD1YDR499W ABZ1P37254 787 aaPredicted RBP2.96□□□□□ -1.94
LCD1YDR499W LAM1P38851 1228 aa2.96□□□□□ -1.94
LCD1YDR499W PIK1P39104 1066 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms