RNA–Protein interactions for RNA: YBR039W

ATP3, Transcript of Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase, yeastyeast

Gene ATP3, Length 936 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATP3YBR039W CIC1P38779 376 aaKnown RBP4.13□□□□□ -1.75
ATP3YBR039W RIM8P53179 542 aa4.13□□□□□ -1.75
ATP3YBR039W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
ATP3YBR039W MSH3P25336 1018 aa4.12□□□□□ -1.75
ATP3YBR039W MDL2P33311 773 aa4.12□□□□□ -1.75
ATP3YBR039W XKS1P42826 600 aa4.12□□□□□ -1.75
ATP3YBR039W RSM26P47141 266 aa4.12□□□□□ -1.75
ATP3YBR039W SNO2P53823 222 aa4.12□□□□□ -1.75
ATP3YBR039W RSA3Q05942 220 aaKnown RBP4.12□□□□□ -1.75
ATP3YBR039W NUT2Q06213 157 aa4.12□□□□□ -1.75
ATP3YBR039W HRK1Q08732 759 aaKnown RBP4.12□□□□□ -1.75
ATP3YBR039W HAT1Q12341 374 aa4.12□□□□□ -1.75
ATP3YBR039W NOG1Q02892 647 aaKnown RBP4.11□□□□□ -1.75
ATP3YBR039W UTP5Q04177 643 aaKnown RBP4.11□□□□□ -1.75
ATP3YBR039W RPS13P05756 151 aaKnown RBP4.1□□□□□ -1.75
ATP3YBR039W SAM35P14693 329 aa4.1□□□□□ -1.75
ATP3YBR039W SQT1P35184 431 aa4.1□□□□□ -1.75
ATP3YBR039W YOR352WQ08816 343 aa4.1□□□□□ -1.75
ATP3YBR039W YPL277CQ08989 487 aa4.1□□□□□ -1.75
ATP3YBR039W SOD2P00447 233 aa4.09□□□□□ -1.75
ATP3YBR039W HDA2Q06629 674 aa4.09□□□□□ -1.75
ATP3YBR039W VMA4P22203 233 aaKnown RBP4.08□□□□□ -1.76
ATP3YBR039W UGA4P32837 571 aa4.08□□□□□ -1.76
ATP3YBR039W YJL045WP47052 634 aa4.08□□□□□ -1.76
ATP3YBR039W DAL4Q04895 635 aa4.08□□□□□ -1.76
ATP3YBR039W SPS1P08458 490 aa4.07□□□□□ -1.76
ATP3YBR039W KAR2P16474 682 aaKnown RBP4.07□□□□□ -1.76
ATP3YBR039W PRP40P33203 583 aaKnown RBP4.07□□□□□ -1.76
ATP3YBR039W QNS1P38795 714 aaKnown RBP4.07□□□□□ -1.76
ATP3YBR039W NBA1Q08229 501 aaKnown RBP4.07□□□□□ -1.76
ATP3YBR039W YLR358CO13565 187 aa4.06□□□□□ -1.76
ATP3YBR039W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76 RIP-Chip
ATP3YBR039W SRO9P25567 434 aaKnown RBP4.06□□□□□ -1.76
ATP3YBR039W PEX28P38848 579 aa4.06□□□□□ -1.76
ATP3YBR039W ULP1Q02724 621 aa4.06□□□□□ -1.76
ATP3YBR039W GCD6P32501 712 aaKnown RBP4.05□□□□□ -1.76
ATP3YBR039W YSC84P32793 468 aa4.05□□□□□ -1.76
ATP3YBR039W ADD66P36040 267 aa4.05□□□□□ -1.76
ATP3YBR039W GEF1P37020 779 aa4.05□□□□□ -1.76
ATP3YBR039W VPS53P47061 822 aa4.05□□□□□ -1.76
ATP3YBR039W RSC58Q07979 502 aa4.05□□□□□ -1.76
ATP3YBR039W VPS35P34110 944 aa4.04□□□□□ -1.76
ATP3YBR039W YHL050CP38721 697 aa4.04□□□□□ -1.76
ATP3YBR039W YHR219WP38900 624 aa4.04□□□□□ -1.76
ATP3YBR039W SPT20P50875 604 aa4.04□□□□□ -1.76
ATP3YBR039W OXR1Q08952 273 aa4.04□□□□□ -1.76
ATP3YBR039W COQ4O13525 335 aa4.03□□□□□ -1.76
ATP3YBR039W SHM2P37291 469 aaKnown RBP4.03□□□□□ -1.76
ATP3YBR039W RSB1Q08417 382 aa4.03□□□□□ -1.76
ATP3YBR039W DED1P06634 604 aaKnown RBP4.02□□□□□ -1.77
ATP3YBR039W ABZ1P37254 787 aaPredicted RBP4.02□□□□□ -1.77
ATP3YBR039W CCZ1P38273 704 aa4.02□□□□□ -1.77
ATP3YBR039W YGL140CP53120 1219 aa4.02□□□□□ -1.77
ATP3YBR039W CLU1Q03690 1277 aaKnown RBP4.02□□□□□ -1.77
ATP3YBR039W RKM2Q03942 479 aa4.02□□□□□ -1.77
ATP3YBR039W GSF2Q04697 403 aaKnown RBP4.02□□□□□ -1.77
ATP3YBR039W SGD1Q06132 899 aa4.02□□□□□ -1.77
ATP3YBR039W RCL1Q08096 367 aaPredicted RBP4.02□□□□□ -1.77
ATP3YBR039W TUB2P02557 457 aaKnown RBP4.01□□□□□ -1.77
ATP3YBR039W PHO4P07270 312 aaKnown RBP4.01□□□□□ -1.77
ATP3YBR039W KIP1P28742 1111 aa4.01□□□□□ -1.77
ATP3YBR039W MPT5P39016 859 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
ATP3YBR039W GPB2P39717 880 aa4.01□□□□□ -1.77
ATP3YBR039W THI12P42883 340 aa4.01□□□□□ -1.77
ATP3YBR039W THI5P43534 340 aa4.01□□□□□ -1.77
ATP3YBR039W THI11P47183 340 aa4.01□□□□□ -1.77
ATP3YBR039W ENV11P53246 860 aa4.01□□□□□ -1.77
ATP3YBR039W ROT1Q03691 256 aa4.01□□□□□ -1.77
ATP3YBR039W EST2Q06163 884 aa4.01□□□□□ -1.77
ATP3YBR039W THI13Q07748 340 aa4.01□□□□□ -1.77
ATP3YBR039W PTC5Q12511 572 aa4.01□□□□□ -1.77
ATP3YBR039W CYC1P00044 109 aaPredicted RBP4□□□□□ -1.77
ATP3YBR039W PRE10P21242 288 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
ATP3YBR039W LAM1P38851 1228 aa4□□□□□ -1.77
ATP3YBR039W MEF2P39677 819 aa4□□□□□ -1.77
ATP3YBR039W DAK2P43550 591 aa4□□□□□ -1.77
ATP3YBR039W HOS3Q02959 697 aaKnown RBP4□□□□□ -1.77
ATP3YBR039W ADI1Q03677 179 aa4□□□□□ -1.77
ATP3YBR039W CTS1P29029 562 aa3.99□□□□□ -1.77
ATP3YBR039W RDH54P38086 958 aa3.99□□□□□ -1.77
ATP3YBR039W SEC26P41810 973 aaKnown RBP3.99□□□□□ -1.77
ATP3YBR039W HNT2P49775 206 aa3.99□□□□□ -1.77
ATP3YBR039W TNA1P53322 534 aa3.99□□□□□ -1.77
ATP3YBR039W GCN5Q03330 439 aa3.99□□□□□ -1.77
ATP3YBR039W HEM13P11353 328 aaKnown RBP3.98□□□□□ -1.77
ATP3YBR039W TAT2P38967 592 aa3.98□□□□□ -1.77
ATP3YBR039W TOS4Q06266 489 aa3.98□□□□□ -1.77
ATP3YBR039W SPO21Q12411 609 aa3.98□□□□□ -1.77
ATP3YBR039W PNS1Q12412 539 aa3.98□□□□□ -1.77
ATP3YBR039W PUF4P25339 888 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
ATP3YBR039W MET4P32389 672 aa3.97□□□□□ -1.77
ATP3YBR039W AFG2P32794 780 aa3.97□□□□□ -1.77
ATP3YBR039W ALG3P38179 458 aa3.97□□□□□ -1.77
ATP3YBR039W YPL109CQ02981 657 aa3.97□□□□□ -1.77
ATP3YBR039W YDR132CQ03900 495 aa3.96□□□□□ -1.78
ATP3YBR039W RSM24Q03976 319 aa3.96□□□□□ -1.78
ATP3YBR039W RPT1P33299 467 aaKnown RBP3.95□□□□□ -1.78
ATP3YBR039W FAA3P39002 694 aa3.95□□□□□ -1.78
ATP3YBR039W PIK1P39104 1066 aa3.95□□□□□ -1.78
ATP3YBR039W CMP2P14747 604 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 81.3 ms