RNA–Protein interactions for RNA: YBL104C

SEA4, Transcript of Subunit of the SEA (Seh1-associated) complex, yeast

Gene SEA4, Length 3,117 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEA4	YBL104C	NMD3	P38861	518 aa	Known RBP	4.04	□□□□□ -1.76
SEA4	YBL104C	FAF1	P40546	346 aa	Predicted RBP	4.04	□□□□□ -1.76
SEA4	YBL104C	TAF1	P46677	1066 aa		4.04	□□□□□ -1.76
SEA4	YBL104C	NGR1	P32831	672 aa	Known RBP	4.03	□□□□□ -1.76
SEA4	YBL104C	PIM1	P36775	1133 aa		4.03	□□□□□ -1.76
SEA4	YBL104C	ERP5	P38819	212 aa		4.03	□□□□□ -1.76
SEA4	YBL104C	SUM1	P46676	1062 aa		4.03	□□□□□ -1.76
SEA4	YBL104C	RAT1	Q02792	1006 aa	Known RBP	4.03	□□□□□ -1.76
SEA4	YBL104C	MSH3	P25336	1018 aa		4.03	□□□□□ -1.76
SEA4	YBL104C	GLO3	P38682	493 aa	Known RBP	4.03	□□□□□ -1.76
SEA4	YBL104C	STM1	P39015	273 aa	Known RBP	4.03	□□□□□ -1.76
SEA4	YBL104C	AAD14	P42884	376 aa		4.03	□□□□□ -1.76
SEA4	YBL104C	RPN7	Q06103	429 aa	Known RBP	4.03	□□□□□ -1.76
SEA4	YBL104C	CLF1	Q12309	687 aa	Predicted RBP	4.03	□□□□□ -1.76
SEA4	YBL104C	UBR2	Q07963	1872 aa		4.03	□□□□□ -1.76
SEA4	YBL104C	GRX4	P32642	244 aa		4.02	□□□□□ -1.77
SEA4	YBL104C	PAM1	P37304	830 aa	Known RBP	4.02	□□□□□ -1.77
SEA4	YBL104C	AIM20	P40451	204 aa		4.02	□□□□□ -1.77
SEA4	YBL104C	MEH1	Q02205	184 aa		4.02	□□□□□ -1.77
SEA4	YBL104C	YDR341C	Q05506	607 aa	Known RBP	4.02	□□□□□ -1.77
SEA4	YBL104C	YLL054C	Q12244	843 aa		4.02	□□□□□ -1.77
SEA4	YBL104C	MAL31	P38156	614 aa		4.02	□□□□□ -1.77
SEA4	YBL104C	BOL3	P39724	118 aa		4.02	□□□□□ -1.77
SEA4	YBL104C	VPS5	Q92331	675 aa		4.02	□□□□□ -1.77
SEA4	YBL104C	RPA135	P22138	1203 aa	Known RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	PTK2	P47116	818 aa	Known RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	RIX7	Q07844	837 aa	Known RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	APL5	Q08951	932 aa	Known RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	DEP1	P31385	405 aa		4.01	□□□□□ -1.77
SEA4	YBL104C	SUV3	P32580	737 aa		4.01	□□□□□ -1.77
SEA4	YBL104C	NFU1	P32860	256 aa		4.01	□□□□□ -1.77
SEA4	YBL104C	MPE1	P35728	441 aa	Known RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	MSH4	P40965	878 aa	Predicted RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	YJR115W	P47152	169 aa		4.01	□□□□□ -1.77
SEA4	YBL104C	YVH1	Q02256	364 aa	Known RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	UBX5	Q06682	500 aa		4.01	□□□□□ -1.77
SEA4	YBL104C	TRK1	P12685	1235 aa		4.01	□□□□□ -1.77
SEA4	YBL104C	ISC10	P32645	267 aa		4.01	□□□□□ -1.77
SEA4	YBL104C	PMC1	P38929	1173 aa	Predicted RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	SEC27	P41811	889 aa	Known RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	RSC8	P43609	557 aa	Known RBP	4.01	□□□□□ -1.77
SEA4	YBL104C	ATG1	P53104	897 aa		4.01	□□□□□ -1.77
SEA4	YBL104C	CLC1	P17891	233 aa		4	□□□□□ -1.77
SEA4	YBL104C	YBR197C	P38306	217 aa		4	□□□□□ -1.77
SEA4	YBL104C	POL5	P39985	1022 aa	Known RBP	4	□□□□□ -1.77
SEA4	YBL104C	QDR1	P40475	563 aa		4	□□□□□ -1.77
SEA4	YBL104C	MOT1	P32333	1867 aa		4	□□□□□ -1.77
SEA4	YBL104C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
SEA4	YBL104C	LTV1	P34078	463 aa		3.99	□□□□□ -1.77
SEA4	YBL104C	SCD5	P34758	872 aa		3.99	□□□□□ -1.77
SEA4	YBL104C	AHP1	P38013	176 aa	Known RBP	3.99	□□□□□ -1.77
SEA4	YBL104C	OCA5	P38738	679 aa		3.99	□□□□□ -1.77
SEA4	YBL104C	NOP7	P53261	605 aa	Known RBP	3.99	□□□□□ -1.77
SEA4	YBL104C	YPQ2	Q06328	317 aa		3.99	□□□□□ -1.77
SEA4	YBL104C	RIF1	P29539	1916 aa		3.99	□□□□□ -1.77
SEA4	YBL104C	SAP190	P36123	1033 aa		3.99	□□□□□ -1.77
SEA4	YBL104C	YTA6	P40328	754 aa		3.99	□□□□□ -1.77
SEA4	YBL104C	AUS1	Q08409	1394 aa		3.99	□□□□□ -1.77
SEA4	YBL104C	LSC2	P53312	427 aa		3.99	□□□□□ -1.77
SEA4	YBL104C	INP54	Q08227	384 aa	Known RBP	3.99	□□□□□ -1.77
SEA4	YBL104C	YHL050C	P38721	697 aa		3.98	□□□□□ -1.77
SEA4	YBL104C	YHR219W	P38900	624 aa		3.98	□□□□□ -1.77
SEA4	YBL104C	NUP85	P46673	744 aa		3.98	□□□□□ -1.77
SEA4	YBL104C	GCR2	Q01722	534 aa		3.98	□□□□□ -1.77
SEA4	YBL104C	JIP5	Q06214	492 aa	Predicted RBP	3.98	□□□□□ -1.77
SEA4	YBL104C	LSO1	Q3E827	93 aa		3.98	□□□□□ -1.77
SEA4	YBL104C	BOI2	P39969	1040 aa		3.98	□□□□□ -1.77
SEA4	YBL104C	ADE16	P54113	591 aa	Known RBP	3.98	□□□□□ -1.77
SEA4	YBL104C	SEN54	Q02825	467 aa	Predicted RBP	3.98	□□□□□ -1.77
SEA4	YBL104C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
SEA4	YBL104C	Q0182	Q9ZZW1	134 aa		3.98	□□□□□ -1.77
SEA4	YBL104C	NUP145	P49687	1317 aa		3.98	□□□□□ -1.77
SEA4	YBL104C	TRL1	P09880	827 aa	Known RBP	3.97	□□□□□ -1.77
SEA4	YBL104C	HEM3	P28789	327 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	APE3	P37302	537 aa	Known RBP	3.97	□□□□□ -1.77
SEA4	YBL104C	SIC1	P38634	284 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	HXT5	P38695	592 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	PES4	P39684	611 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	SPR3	P41901	512 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	ACF4	P47129	309 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	UBP16	Q02863	499 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	CDC45	Q08032	650 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	RGA1	P39083	1007 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	MDJ2	P42834	146 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	PSR1	Q07800	427 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	VMA4	P22203	233 aa	Known RBP	3.97	□□□□□ -1.77
SEA4	YBL104C	BRE2	P43132	505 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	RCM1	P53972	490 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	CRF1	Q04930	467 aa		3.97	□□□□□ -1.77
SEA4	YBL104C	HEL2	Q05580	639 aa	Known RBP	3.97	□□□□□ -1.77
SEA4	YBL104C	MSC6	Q08818	692 aa	Known RBP	3.97	□□□□□ -1.77
SEA4	YBL104C	MRPL33	P20084	86 aa		3.96	□□□□□ -1.78
SEA4	YBL104C	PWP2	P25635	923 aa	Known RBP	3.96	□□□□□ -1.78
SEA4	YBL104C	SSN3	P39073	555 aa		3.96	□□□□□ -1.78
SEA4	YBL104C	JJJ2	P46997	583 aa		3.96	□□□□□ -1.78
SEA4	YBL104C	SUT1	P53032	299 aa	Known RBP	3.96	□□□□□ -1.78
SEA4	YBL104C	YNL058C	P53947	316 aa		3.96	□□□□□ -1.78
SEA4	YBL104C	YLR346C	Q06139	101 aa		3.96	□□□□□ -1.78
SEA4	YBL104C	BOI1	P38041	980 aa	Known RBP	3.96	□□□□□ -1.78
SEA4	YBL104C	OCA1	P50946	238 aa	Predicted RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms