RNA–Protein interactions for RNA: YAL019W

FUN30, Transcript of Snf2p family member with ATP-dependent chromatin remodeling activity, yeast

Gene FUN30, Length 3,396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FUN30	YAL019W	SNU71	P53207	620 aa	Known RBP	3.42	□□□□□ -1.86
FUN30	YAL019W	YNL108C	P53929	270 aa		3.42	□□□□□ -1.86
FUN30	YAL019W	TLG1	Q03322	224 aa		3.42	□□□□□ -1.86
FUN30	YAL019W	RRB1	Q04225	511 aa	Known RBP	3.42	□□□□□ -1.86
FUN30	YAL019W	PEX19	Q07418	342 aa		3.42	□□□□□ -1.86
FUN30	YAL019W	SNU66	Q12420	587 aa	Predicted RBP	3.42	□□□□□ -1.86
FUN30	YAL019W	UBR2	Q07963	1872 aa		3.42	□□□□□ -1.86
FUN30	YAL019W	PRX1	P34227	261 aa	Known RBP	3.42	□□□□□ -1.86
FUN30	YAL019W	MRPL10	P36520	322 aa		3.42	□□□□□ -1.86
FUN30	YAL019W	RSC30	P38781	883 aa		3.42	□□□□□ -1.86
FUN30	YAL019W	TLG2	Q08144	397 aa		3.42	□□□□□ -1.86
FUN30	YAL019W	PSH1	Q12161	406 aa		3.42	□□□□□ -1.86
FUN30	YAL019W	ARG8	P18544	423 aa		3.41	□□□□□ -1.86
FUN30	YAL019W	RPT3	P33298	428 aa	Known RBP	3.41	□□□□□ -1.86
FUN30	YAL019W	OSH3	P38713	996 aa	Known RBP	3.41	□□□□□ -1.86
FUN30	YAL019W	RPN11	P43588	306 aa	Known RBP	3.41	□□□□□ -1.86
FUN30	YAL019W	YJL181W	P46987	611 aa		3.41	□□□□□ -1.86
FUN30	YAL019W	TUB4	P53378	473 aa		3.41	□□□□□ -1.86
FUN30	YAL019W	RRP15	Q06511	250 aa	Predicted RBP	3.41	□□□□□ -1.86
FUN30	YAL019W	RAD59	Q12223	238 aa		3.41	□□□□□ -1.86
FUN30	YAL019W	PIF1	P07271	859 aa		3.41	□□□□□ -1.86
FUN30	YAL019W	TRM1	P15565	570 aa	Known RBP	3.41	□□□□□ -1.86
FUN30	YAL019W	RKM3	P38222	552 aa		3.41	□□□□□ -1.86
FUN30	YAL019W	FYV10	P40492	516 aa		3.41	□□□□□ -1.86
FUN30	YAL019W	PIB2	P53191	635 aa		3.41	□□□□□ -1.86
FUN30	YAL019W	MRX10	Q05648	414 aa		3.41	□□□□□ -1.86
FUN30	YAL019W	SMD2	Q06217	110 aa	Known RBP	3.41	□□□□□ -1.86
FUN30	YAL019W	STO1	P34160	861 aa	Known RBP	3.4	□□□□□ -1.86
FUN30	YAL019W	RTT107	P38850	1070 aa		3.4	□□□□□ -1.86
FUN30	YAL019W	GSM1	P42950	618 aa		3.4	□□□□□ -1.86
FUN30	YAL019W	KRE33	P53914	1056 aa	Known RBP	3.4	□□□□□ -1.86
FUN30	YAL019W	RBA50	Q04418	439 aa		3.4	□□□□□ -1.86
FUN30	YAL019W	EIS1	Q05050	843 aa	Known RBP	3.4	□□□□□ -1.86
FUN30	YAL019W	SVF1	Q05515	481 aa		3.4	□□□□□ -1.86
FUN30	YAL019W	YPR204W	Q08995	1032 aa		3.4	□□□□□ -1.86
FUN30	YAL019W	RIM20	Q12033	661 aa		3.4	□□□□□ -1.86
FUN30	YAL019W	ECM29	P38737	1868 aa		3.4	□□□□□ -1.86
FUN30	YAL019W	RTG2	P32608	588 aa	Known RBP	3.4	□□□□□ -1.87
FUN30	YAL019W	SHC1	P39000	512 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	PAC1	P39946	494 aa	Known RBP	3.4	□□□□□ -1.87
FUN30	YAL019W	YER130C	P39959	443 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	ENP2	P48234	707 aa	Known RBP	3.4	□□□□□ -1.87
FUN30	YAL019W	TBF1	Q02457	562 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	AGE1	Q04412	482 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	YOL087C	Q99247	1116 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	ENO1	P00924	437 aa	Known RBP	3.4	□□□□□ -1.87
FUN30	YAL019W	ENO2	P00925	437 aa	Known RBP	3.4	□□□□□ -1.87
FUN30	YAL019W	RDS2	P19541	446 aa	Known RBP	3.4	□□□□□ -1.87
FUN30	YAL019W	MED8	P38304	223 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	YMR124W	P39523	943 aa	Known RBP	3.4	□□□□□ -1.87
FUN30	YAL019W	YIR042C	P40586	236 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	PUS6	P53294	404 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	YNL193W	P53870	558 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	FAR11	P53917	953 aa		3.4	□□□□□ -1.87
FUN30	YAL019W	CEF1	Q03654	590 aa	Predicted RBP	3.4	□□□□□ -1.87
FUN30	YAL019W	LAA1	P39526	2014 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	HXK1	P04806	485 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	SUP35	P05453	685 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	CDC16	P09798	840 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	CAF20	P12962	161 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	ACE2	P21192	770 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	SSA4	P22202	642 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	PAT1	P25644	796 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	NGR1	P32831	672 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	CAJ1	P39101	391 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	CCT5	P40413	562 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	ORM2	Q06144	216 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	HIF1	Q12373	385 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	CYB2	P00175	591 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	CPA2	P03965	1118 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	SWI3	P32591	825 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	ECM21	P38167	1117 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	RRM3	P38766	723 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	HOS3	Q02959	697 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	SAS4	Q04003	481 aa		3.39	□□□□□ -1.87
FUN30	YAL019W	RPN7	Q06103	429 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	ETT1	Q08421	412 aa	Known RBP	3.39	□□□□□ -1.87
FUN30	YAL019W	LPD1	P09624	499 aa	Known RBP	3.38	□□□□□ -1.87
FUN30	YAL019W	RDS1	P25611	832 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	DEP1	P31385	405 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	YBL036C	P38197	257 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	PEA2	P40091	420 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	YKE2	P52553	114 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	MRPS35	P53292	345 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	HCR1	Q05775	265 aa	Known RBP	3.38	□□□□□ -1.87
FUN30	YAL019W	MRD1	Q06106	887 aa	Known RBP	3.38	□□□□□ -1.87
FUN30	YAL019W	YLH47	Q06493	454 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	IRC3	Q06683	689 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	APL5	Q08951	932 aa	Known RBP	3.38	□□□□□ -1.87
FUN30	YAL019W	SEC65	P29478	273 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	RAD16	P31244	790 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	MSH4	P40965	878 aa	Predicted RBP	3.38	□□□□□ -1.87
FUN30	YAL019W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.38	□□□□□ -1.87	not detected
FUN30	YAL019W	HRQ1	Q05549	1077 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	AFT2	Q08957	416 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	YDL206W	Q12424	762 aa		3.38	□□□□□ -1.87
FUN30	YAL019W	CDC37	P06101	506 aa	Known RBP	3.38	□□□□□ -1.87
FUN30	YAL019W	TPM1	P17536	199 aa	Known RBP	3.38	□□□□□ -1.87
FUN30	YAL019W	SRP40	P32583	406 aa	Predicted RBP	3.38	□□□□□ -1.87
FUN30	YAL019W	XDJ1	P39102	459 aa		3.38	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms